Thermoanaerobacter mathranii: Tmath_1564
Help
Entry
Tmath_1564 CDS
T01250
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
tmt
Thermoanaerobacter mathranii
Pathway
tmt02020
Two-component system
tmt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tmath_1564
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tmath_1564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmt03021
]
Tmath_1564
Transcription machinery [BR:
tmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tmath_1564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_23
HTH_Crp_2
HTH_17
HTH_26
HTH_Tnp_ISL3
Sigma70_r4
Sigma70_r4_2
Xre-like-HTH
HTH_31
Cro
Phage_CII
LacI
MarR_2
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ADH61273
UniProt:
A0ABM5LRK4
LinkDB
All DBs
Position
complement(1553778..1555142)
Genome browser
AA seq
454 aa
AA seq
DB search
MRMEFDLKLQQTQKLIMTPELKQAIEILQLNSLELNALIEQELETNPVLEKEETSEEEDA
YEYDLYELSKYIRETEERMYYDDSDDEEIEEVNYENFVSPKPSLSDHLLFQLHITPIPHK
IKKICEYIIFSLSPSGYLREDIKDIAKILECSEEEVLEGLSIVQSFDPPGIAARNLQECL
KLQLLAQDNYKGIIKELVDYHLEEIAEGKYSYLAKLYNISLKEVQQAVDFIKKLNPKPGS
SFSSTADVGYIVPDVEVIKRDREYFVIVNDSITPKLKINNYYHSILNSNDEEAKKYINTK
LQSAMWLIKSLESRKETLYKVVKAIVELQKDFLDRGINYLKPMTQKQVADIVGVHESTVS
RAINGKYVATPRGLFEIKFFFQSGISNRNGNEISAESIKNLIKKLIEEEDPANPLSDQKI
ADILKEKNINISRRTVAKYREECNIPSTIKRRRY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggaattcgatttaaagcttcaacaaactcaaaaacttataatgactcctgaa
ctaaaacaggctattgagattttgcagttaaattccttagaacttaatgctcttatagag
caggaattagagactaatcctgttcttgaaaaagaagaaacatctgaggaagaagatgca
tatgaatatgacttgtatgagttgtctaaatatatacgagagacagaagagagaatgtat
tacgatgattctgatgatgaagaaattgaagaagtcaattatgaaaattttgtgtctcca
aagccctctttgagcgaccaccttttgtttcaacttcacataacacctattcctcacaaa
atcaaaaaaatatgtgaatatataatatttagtctaagtccgagtggttatttgagagaa
gatataaaagacattgcgaagattttagaatgttctgaagaagaggtgttagaagggtta
tctatagtccaatcttttgaccctccaggaattgcagctcgcaatttgcaagaatgttta
aaactccaacttttagctcaagataattacaaaggtattataaaagagttggtagactat
catcttgaggaaattgcagaaggtaagtattcatatttagcaaagttgtacaatatttcc
ttaaaagaagtgcaacaagctgtagattttataaaaaaactcaatcctaaaccaggaagt
agcttttcttctacagcagatgtaggatatattgtaccagatgtggaagtgataaaaaga
gatagagaatactttgtaatagtaaacgattcaataactcctaagctcaagattaataat
tactatcattctattttgaatagtaatgatgaagaagctaaaaaatatataaatacgaag
ctgcaatcagctatgtggcttataaaaagtttagaaagcagaaaagaaactttgtataaa
gtagttaaagcaatagtggagttacaaaaagattttcttgacagaggcataaattattta
aagcctatgacgcaaaagcaagttgctgatattgtaggtgttcacgagtctaccgtcagc
agagctataaacggcaaatatgttgcaactcctcgaggactttttgagataaagttcttt
ttccaatctggtatttccaacagaaatgggaatgaaatttctgctgaatctattaaaaac
ctcataaaaaaattgattgaagaagaagaccctgcaaatcctctaagtgaccaaaaaata
gctgatattttaaaagaaaaaaatattaatatttcaagaagaacagtggcaaaatataga
gaggaatgcaatattccttctactatcaaaagaagaagatattaa
DBGET
integrated database retrieval system
