Thermoanaerobacter mathranii: Tmath_1842
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Entry
Tmath_1842 CDS
T01250
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
tmt
Thermoanaerobacter mathranii
Pathway
tmt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Tmath_1842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmt03400
]
Tmath_1842
DNA repair and recombination proteins [BR:
tmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Tmath_1842
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
zf-Vps39_C
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
ADH61540
UniProt:
A0ABM5LRW5
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All DBs
Position
1863695..1864507
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AA seq
270 aa
AA seq
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MRSMWKGAISFGLVSIPIKLYTATEDHAIHFRQLHKECKTPIKYEKICPVCNRPISDEEI
VRGYEYEPGKFVIIDEEDLERIPMPTVKTIDIVDFTDIGQIDPIYYDKTYFIVPEDIGTK
PYVLLRDSMKETKRVAIAKVVIRSKQSLACIRVYDEKYMVMETMHFPDEIKSTNQLPPLR
EVNLHENEIKMAKQLVDTLTSDFKPEKYDDNYRKTLIEMIESKIQDKEIEIPQKAPEADN
VLDLVSALKASIESVKKEEKAKKGRKRKGA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcaatgtggaaaggagcaataagttttggtcttgtaagtatccccataaaactg
tataccgctacagaagaccatgccatacattttaggcaacttcataaagaatgtaaaact
cctataaaatatgaaaaaatctgccctgtatgtaatagacccatttcagatgaggaaata
gtgcgaggatatgaatacgaaccaggtaaatttgtcattatagatgaggaagatttggaa
aggatacctatgccaacagttaaaaccattgatatagtagattttaccgatataggacaa
atagaccccatatattatgataaaacatatttcattgtacccgaagatattggtacaaag
ccttatgtacttttaagagattctatgaaagaaacaaaacgagttgcaatagcgaaagtg
gtaatcaggtccaagcaaagcctcgcatgcatacgagtgtacgatgaaaaatatatggtc
atggaaacaatgcattttcctgatgaaataaaaagcacaaaccaacttcctcctttaaga
gaagtcaacttgcatgaaaatgaaataaaaatggccaaacaacttgttgatactctaacc
tcagatttcaaacccgaaaaatatgatgataactacagaaagacgttaattgaaatgatt
gagtcaaagatacaagacaaagaaatagaaattcctcaaaaagcacctgaagctgacaat
gtcctcgatttagtaagtgcactaaaagcgagtattgaatctgtaaaaaaagaagaaaaa
gcaaaaaaaggtcgcaaaagaaaaggcgcataa
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