Thermoanaerobacter mathranii: Tmath_1900
Help
Entry
Tmath_1900 CDS
T01250
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tmt
Thermoanaerobacter mathranii
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmt03016
]
Tmath_1900
Enzymes [BR:
tmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tmath_1900
Transfer RNA biogenesis [BR:
tmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tmath_1900
Prokaryotic type
Tmath_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF2505
DUF6795
Motif
Other DBs
NCBI-ProteinID:
ADH61587
LinkDB
All DBs
Position
complement(1926071..1926793)
Genome browser
AA seq
240 aa
AA seq
DB search
MIVVQYDGTNYHGWQYQKNAITVQEVLQKAIKKVTGEEVNLIGASRTDTGVHALYQVANF
KTNTKIPAEKLPYALNSVLPDDIVITQAKDVEDSFHARYSAKRKRYKYLILNRKFRMPTM
RNYCWHISYPLNVEKMKKAATYLIGTHDFSAFKASGSSKTSTIRTVYDLIIEKNEDFINI
EIEADGFLYNMVRIIVGTLSYVGLGKIGENEVYNILASKDRTKAGITAPPQGLYLIKIIY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagtacaatatgacgggaccaattatcatggttggcaataccaaaagaatgca
ataacagtccaggaagtattgcaaaaagcaataaagaaagtaacaggagaagaagttaat
ttaattggggcaagtagaactgatacgggtgtccatgctctataccaagtagctaacttt
aaaactaatactaaaatacctgcagaaaaactgccctacgctctaaacagtgtattaccc
gacgatatagtaattacacaagcaaaagatgttgaagattcttttcacgcccgatatagt
gcaaaaaggaaaagatataaatacctcattctcaataggaaatttcgaatgcctacaatg
agaaattattgctggcatataagctatcctttaaatgtagaaaaaatgaaaaaagcagca
acttacttaattggcactcatgatttttctgcttttaaagcttcaggaagtagtaagaca
agtacaataagaacagtgtatgacttaattatcgaaaaaaatgaagattttatcaacatt
gaaatagaagccgatggttttttgtataatatggtgcgaataattgtagggacactgtct
tatgttggccttggcaaaataggggaaaatgaagtttataacattttagcatcgaaagac
aggacaaaagcgggcataactgctcctcctcaaggattgtatttaataaaaattatctat
tga
DBGET
integrated database retrieval system
