Thermoanaerobacter mathranii: Tmath_1905
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Entry
Tmath_1905 CDS
T01250
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmt
Thermoanaerobacter mathranii
Pathway
tmt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tmath_1905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmt03021
]
Tmath_1905
03400 DNA repair and recombination proteins [BR:
tmt03400
]
Tmath_1905
Enzymes [BR:
tmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tmath_1905
Transcription machinery [BR:
tmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tmath_1905
DNA repair and recombination proteins [BR:
tmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tmath_1905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADH61592
LinkDB
All DBs
Position
complement(1929729..1930676)
Genome browser
AA seq
315 aa
AA seq
DB search
MFEIIEPKIEIVEQAEDGTYGKFVVEPLERGYGITLGNSLRRVLLSSLPGAAPKSVKIDG
VLHEFSTLPGVKEDVVEIILNLKEIAVKLHSDEPVVGRIDVEGKGEVTAGHIKGSADIEI
LNPDHHIATLSDDGKLHMEIVFVKGKGYVPSDKNKEPNQPIGVIPVDSIFTPVKKVSYNV
ENTRVGNVTDYDKLTLEVWTNGTITPKEAISMASDMLIRYFQKFISFSGEYKSSDIFVDK
PDKKIEKPLDMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEEMMKVRNLGKKSLEEVK
QKLQALGLSLKKADE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaaataattgaaccaaaaatagagattgttgagcaggcggaagatgggacgtat
ggaaagtttgtagtagagcctttagaaaggggttatggcataacgcttggaaattcttta
agaagagtacttttgtcctctcttcctggtgctgctcctaaatctgtaaagatagatgga
gtattacatgaattttcaaccctaccaggagttaaagaggatgtggtagaaattatactt
aaccttaaagaaatcgcagttaaattgcattcagacgaaccggtggtagggcgcatagat
gtagaaggaaaaggagaagtaacagcaggtcatataaaaggtagtgccgatatagagatt
ttaaaccctgaccatcatatagctactttaagtgacgatggcaaactccatatggagatt
gtgtttgttaaaggaaagggttatgtgccttcagataaaaacaaagaacctaaccaaccg
ataggtgtcattccagttgattctatttttacaccagtaaaaaaagtaagctacaatgta
gaaaatactcgtgtaggcaatgttacagactatgataaacttactttggaagtatggaca
aatggaactattacgcctaaagaagctattagtatggcttctgacatgttgattaggtac
tttcagaaatttatatcttttagtggcgaatacaaaagttcggatatttttgtggacaaa
cctgacaaaaaaatcgaaaaacctcttgatatgacgattgaagagttagacttatctgta
aggtcctataattgcttaaagagagctggaataaatacagtacaggagcttactcaaaag
acagaagaagagatgatgaaagttagaaatttagggaaaaaatctttagaagaggttaaa
caaaaactccaagcattaggacttagcttaaagaaggcagacgaataa
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