Trichechus manatus latirostris (Florida manatee): 101340298
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Entry
101340298 CDS
T05135
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X2
KO
K04842
voltage-gated sodium channel type X alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101340298
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101340298
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
CcmD_alt
Na_trans_cytopl
GPHH
Motif
Other DBs
NCBI-GeneID:
101340298
NCBI-ProteinID:
XP_012411267
UniProt:
A0A2Y9FZI9
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MEFPLGSLETTNFRRFTPESLVEIEKQIAAKRAAKKARDKQGEQKDEEEKPRPQLDLKAC
NQLPRFYGELPVELVGEPLEDLDPFYSTHQTFMVLNKGRTISRFSATRALWLFSPFHPIR
RTAIKVSVHSYPLWFSLFITVTILVNCVCMTQTDFPDKIEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYIGEAIDLQGVSGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTLLNETANSSYNHEWNF
CHTDEDFQINKPGTSDPLLCGNGTDAGHCPSGYFCLKTTENPDFNYTSFDSFAWAFLSLF
RLMTQDSWERLYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATLDE
IEAKEKKFQETLEMLRKEQEVLAALGVDTASLHSHSGSPLTSKNASEKRHRTKPRVSEGS
TDNKSPQSEPYNQQRMSFLGLASGRRRASHGSVFHFLAPGQDVSFPDGITDDGVFLGDRE
SHRGSLLLGRGAGQQGPLPRSPLLQPSNPGLGHGEDGHPTLPTSELAPGAMEGLALDEGQ
KIFLSAEYLNEPFRAQRAMSVVSIMTSVLEELEESKQRCPPCFTSLARKYLIWECCSSWV
KLKTRLFGIVTDPFAELAITLCIVVNTVFMAMEHHGMSSAFESMLQIGNIVFTIFFTAEM
IFKIIAFDPYYYFQKRWNIFDCIIVTVSLMELSTVKKGSLSVLRTFRLLRVFKLAKSWPT
LNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGESYRNNRRNISAPGEEWPRWHM
HDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLMVMVLGNLVVLNLFIALLLNS
FSADNLTAPEDDGEVNNLQVALARIQAFGHCAKQAFCDFFRKPCLRPWPKAEPQLVVKLP
LSSSSAENHIATDAAVGSPGGVPAPRGPRDDHSDFITNPSVWVSVPIAEGESDLDDLEDD
GEEDAQSSRQEVAPKDQEQLQQVGRYEDHLAPRSPGSGMSSADLAPYLGDKGKDKAAPQD
PAEKGDDMSSSEGSTVDCPDPEEVLRKIPELADDLEEPDDCFTEGCMSHCPCCKVDTAKA
PWGMGWQVRKTCFRIVEHSWFESFIVFMILLSSGVLAFEDYYLEEKPTVKALLEYTDRVF
TFIFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSDMASIKALRTLR
ALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINT
TNGDFPLVPLSVVNNKSECKHQNYTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIM
YAAVDSREMDMQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIVIMVLICLNMITM
MVETDEQSEEKTKILNKINQFFVAVFTCECVLKMFALRHYYFTDGWNVFDFIVMVLSIGS
LVVSAIMKSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLL
LFLVMFIYSIFGMANFAYVKWEAGIDDMFNFRTFANSMLCLFQITTSAGWDGLLSPILNT
GPPYCDPNLPNGSGTRGDCGSPAVGIIFFTSYIIISFLIVVNMYIAVILENFNVATEEST
EPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNRNVLIQMDLPLV
PRDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDV
SATVIQKAYRNYVLQRSMTIFNSSDVPRAEEETVSPTDEGFVAFMANENCVLPDRSETAS
ATSFPPSYDSVTRGLSDRAHLSTSSSVQNEGEATSTEAPAPGPQ
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccccttgggtctctggaaactaccaactttcgtcgcttcactccggagtcg
ctggtggagattgagaagcaaattgcagcaaagcgggcagcaaagaaagccagagacaag
caaggggagcagaaagatgaagaagagaagccccggccccagctagacttgaaagcctgc
aaccagctgcccaggttctatggcgagctcccggtagaactggtcggggagcccctggag
gatctggaccccttctacagcacacaccagacatttatggtgctgaacaaagggaggacc
atttcccggttcagtgccacccgggcgctgtggctgttcagccctttccacccgatcaga
agaacggctatcaaagtgtctgtccactcatatcctttatggttcagtttatttattacg
gtcactattttggtcaactgtgtgtgcatgacccaaacggattttccagataaaatcgag
tacgtcttcactgtcatttacacttttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacttacctgagagatccctggaactggctggattttagtgtcatt
accctggcatacattggcgaagcaatagacttacaaggagtctcaggcctgcggacattc
agagttcttagagctttaaaaacagtttctgtgatcccagggctgaaggtcatcgtgggg
gcgctgatccactcggtgaagaagctggctgatgtgaccattctcaccatcttctgcctg
agtgtcttcgcgctggtgggattgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaactgcacacttcttaatgagacagccaattcctcttataatcacgagtggaatttc
tgccacacggatgaagatttccaaatcaacaagccgggaacctctgatcccttgctgtgt
ggcaacggaactgacgcaggccactgtccctcaggttatttctgccttaaaacaaccgaa
aacccggactttaactacaccagcttcgactcctttgcttgggctttcctctcactgttc
cgcctcatgacgcaggattcctgggaacgcctctaccagcagaccctgagggcttctggg
aaaatctatatggtctttttcgtgcttgtcatcttcctgggatctttctatctggtcaac
ctgatcttggctgtggtcaccatggcatatgaggagcagaaccaggctacccttgacgaa
attgaagcaaaggagaagaagttccaggagaccctagagatgctccggaaggaacaggag
gtactggcagcactgggggttgacacagcctctctccactcccacagtggatctccttta
acctcgaaaaatgccagtgagaaaaggcacaggacaaaaccaagagtgtcagagggctcc
acagacaacaaatcaccccaatctgagccctacaaccagcaaaggatgtctttcctaggt
ctcgcctctgggagacgccgggctagccatggcagtgtgttccatttcctggctcctggc
caagacgtctcattccctgacgggatcacagatgatggagtcttcctcggagaccgtgaa
agccatcggggctctctgctgctgggtaggggtgctggccagcaaggccccctccctagg
agcccgctgcttcaaccctccaaccctggcttagggcatggagaagatggacatcccacg
cttcccactagtgagcttgcccctggagccatggaaggcttggcactcgatgagggacag
aagattttcctgtcagcagaatacttgaatgaacctttccgagcccaaagggcaatgagt
gttgtcagcatcatgacctccgtccttgaggaactcgaggagtctaaacagaggtgccca
ccctgcttcaccagcttggctcggaagtatctgatctgggagtgctgctcctcatgggtg
aagctcaagacgcgtctctttgggattgtgacggaccccttcgcggagcttgccatcacc
ttgtgcatcgtggtgaacactgtcttcatggccatggagcaccacggcatgagctccgcc
ttcgaatccatgctgcaaataggcaacattgtctttaccatattttttactgcggaaatg
atcttcaaaatcatcgcctttgacccttactattacttccagaagaggtggaatatcttt
gactgcatcatcgtcactgtgagcttgatggagctcagcacggtcaagaagggaagcctg
tccgtgctgcggacattccgcctgctgcgggtcttcaagttggccaagtcttggccaacc
ttaaacacactcatcaagatcatcggaaactcagtgggggcactggggaacctcaccatc
atcctggccatcattgtctttgtcttcgctctggttggcaagcagctcctcggggagagc
taccgcaataaccggcgcaacatctccgcccccggggaagaatggccccgctggcacatg
cacgacttcttccactccttcctcatcgtcttccggatcctctgcggggagtggatcgag
aacatgtgggcctgcatggaggtcggccagaaatccatatgcctcatccttttcttgatg
gtgatggtgctggggaacctggtggtgctcaacctgttcatcgccctgctgctgaactct
ttcagtgctgacaacctcacagccccagaagacgacggggaggtgaacaacctgcaggtg
gcgctggcgcggatccaggcctttggccattgcgccaagcaggccttctgtgacttcttc
cgcaagccctgcctgcgcccctggcccaaggcggagccccagctggtggtcaaactcccg
ctctccagctccagcgctgagaaccacattgctaccgacgctgcagtgggaagccctgga
ggggtcccggcccccagaggccccagggatgaccacagtgacttcatcaccaatcccagt
gtgtgggtctctgtgcccattgccgagggtgaatctgacctcgatgacttggaggatgat
ggcgaggaggatgctcagagctccagacaggaagtggcccccaaagatcaggagcagctg
cagcaagtcgggaggtacgaggaccacctggcacccaggagcccaggctctgggatgtct
tctgcggacctggctccgtacctgggggacaaggggaaagacaaggccgctccccaagac
cctgcagagaaaggggatgacatgagctcctcagaaggcagcacggtggactgcccggac
cctgaggaggtcctgaggaagatccctgagctggccgatgacctggaagagccagatgac
tgtttcacagaaggctgtatgagccactgtccctgctgcaaagtggacaccgccaaggct
ccgtggggcatgggctggcaggtgcgaaagacctgcttccgcattgtggagcacagctgg
tttgagagcttcatcgtcttcatgatcctgctcagcagtggagtgctggcctttgaagac
tactaccttgaggaaaagcccacggtgaaagccttgctggagtacactgacagggtgttc
acgtttatctttgtgttcgagatgctgctcaagtgggttgcctatggcttcaaaaaatac
ttcaccaatgcctggtgctggctggacttcctcattgtgaacatctcattgacaagcctc
atagcaaagatcctggagtattctgatatggcatctatcaaagcccttcgcaccctccgc
gccctgcggccactgcgggctctgtctcgatttgaaggcatgcgggttgttgtggatgcc
ctggtgggtgccatcccatccatcatgaatgtcctcctcgtctgcctcattttctggctc
atcttcagcattatgggtgtgaacctctttgcagggaagttttggagatgcatcaacact
accaatggagactttcctcttgtgcccttgtctgtggtgaataacaagtctgagtgtaaa
catcaaaactacaccggcagcttcttctgggtcaatgtgaaggtcaactttgataacgtt
gcaatgggttaccttgcacttcttcaggtggcaaccttcaaaggctggatggatatcatg
tatgcagctgtcgactcccgagagatggacatgcagcccaagtgggaagacaatgtgtac
atgtacttgtacttcgtcatcttcatcattttcggcggcttcttcacactgaatctcttt
gttggggtcataattgacaacttcaatcaacagaagaaaaagttagggggccaggacatc
ttcatgacggaggagcagaagaagtactacaatgccatgaagaagctgggctccaagaag
ccccagaagcccatcccacggcccctgaacaagtaccaaggcttcgtctttgacattgtg
accagacaagcttttgacatcgtcatcatggtcctcatctgcctcaacatgatcaccatg
atggtggaaactgatgagcagagtgaagaaaagacaaaaatcctcaacaaaatcaaccag
ttctttgtggccgtcttcacctgcgagtgtgtcctgaagatgtttgccctgaggcattac
tacttcaccgatggctggaatgtatttgacttcattgtcatggttctctccattgggagc
ctggtggtttctgcaatcatgaagtcacttgaaaattatttctctccaacactcttccgc
gtcatccgcctggcccgaatcggccgcatcctcaggctgattcgagcagccaaggggatc
cggacgctgctcttcgccctcatgatgtccctgcccgccctgttcaacatcggcctgctg
ctcttcctagtcatgttcatctactccatcttcggcatggccaacttcgcatacgtcaaa
tgggaggctggcatcgacgacatgttcaacttcaggacttttgccaacagcatgctgtgc
ctcttccagatcaccacgtcggccggctgggatggcctcctcagtcccatcctcaacaca
gggcccccctactgtgaccccaatctgcccaatggcagtggaaccaggggggactgtggg
agcccagccgtgggcatcatcttcttcaccagctacatcatcatctccttcctcatcgtg
gtcaacatgtacattgcagtaattctggagaacttcaatgtcgccacagaagagagcacc
gagcccttgagcgaggatgactttgacatgttctatgagacctgggagaagtttgacccg
gaggccacccagttcattaccttttctgccctctcagactttgcagacaccctgtctggc
cccctgcgaatcccaaaacccaatcggaatgtattaatccagatggacctgcccttagtc
cctagagataagatacactgtttggatatcctttttgcattcaccaagaatgtgttggga
gaatctggggaattggattctctgaaggcaaatatggaagagaagtttatggcaactaat
ctttcaaaggcatcttatgaacctatagcaaccaccctgcggtggaagcaagaagacgtt
tcagccaccgtcatccaaaaggcttatcggaactatgtgctacaacgctccatgacaatc
ttcaactcctcagatgtgccaagggctgaggaggagactgtgtcacccacagatgaaggc
tttgttgcattcatggcaaatgaaaattgtgtgctcccggacagatctgaaactgcgtct
gccacctctttcccaccgtcttatgacagtgtcactagaggccttagcgacagagcccac
ctgagcacgtctagctcagtgcagaatgaaggtgaagccaccagtacggaagcacctgca
ccagggccccagtga
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integrated database retrieval system
