Trichechus manatus latirostris (Florida manatee): 101340344
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Entry
101340344 CDS
T05135
Name
(RefSeq) nestin
KO
K07609
nestin
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tmu04812
]
101340344
Cytoskeleton proteins [BR:
tmu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
101340344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
101340344
NCBI-ProteinID:
XP_004388528
UniProt:
A0A2Y9E7Q2
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MEGCLGEESFQMWELNRRLEIYLSRVKALEEQNELLSAELGGLRAQSADASWRARADDEL
AALRALVDQRWREKHAAEVARDNLAEELEGVAGRCQQQRLAREQAAEEAARSRRAVEAEK
CAQTWLSNQAADLERELEALRAEHEEERACLNAQAACAXXXXXXXXXXXXPAPEVEELAQ
RLGEAWRGAVRGYQERVAHMETSLGQARERLGRAVQGAREGRLELQQLQAERGGLQERRA
ALEQRLEGRWQERLRATEKFQLAVEALEQEKQGLQNQIAQVLEGRQQLAHLKMSLSLEVA
TYRTLLEAENTRLQTPGSGSKASLGFQDPKPELHFLGTPEGRRLAPLLPVLSPTPLTSPL
PDTIRTPMPAFPKRQEFLQACTPTLASTPISPTPQTPYPATDTEIRAQEAPLSLLQSQGG
KQEAPEPLWAEAKVAIPASILPGPEEPGGKQQKASPGQSPEDHVSLAPPPNPDHPSLEAK
EGEPSGSGMSSISQEEGEGQMWGLKDEEATIEVKVGSTLQQETWQEEGDVDREEIQEPQS
LLEKETPKALEEEIQEPLMSLEKQSHETQRSLEKENQDSLRSLEGENLETPKTLEKENQE
LLKSLEEKGLEIVSSVEKETLELRTPIEKEDSQTLQSLEKENQEFLRSVNENLETFLFPG
KENQELVRSLEEENLESLRALEKESQEPLRSQEVEDQEALGPLAKENQEPLRSQESQEEE
NQETLRTLEKETQESLKSLEDENQEILENTDQEPLKSLKIENQETLRTLEKETQESLKSL
DDENQKILENMDQEPLKSLKQKTLKPLEKENQELLRSLKEDSVEGVKSLEIKNLGSLKSA
ETEALRILKPPETEEPLWSLEEENQETMKALEKEIQEPLVSVEETQETLKPLEKENQEPL
RSLGEWDLENLKSSEEVDKESPKYLEEEGNLERGENTDLLRSLEDEGQELPLSANQKRWE
DVVGGDQELSHDPPPGRDEVENKDEAELGPKEQDDLDGKEEVVEQVELLLNAAVEAGNTG
EGYPGSPEPEEQRVPVEGAMGEGGAEGHQDPEGQPDQVGAPGLGAPQGMPEMVEAMLKDE
DVAPGSDPASLQVALASETAMGESVVGTEEGLEQEAVALEDPGHLAREEVMEPPLGEEGL
EAKKVQGLGEPGKGLKEADALESELSQLPGESRDPRKPEESESWAETESEAAWGAEEGLP
AKTLCLDGIDAPQPRPEEDAKPVPGPPSPRPPEPWVPTSLPEDAPGPQPQTEGKQEASWG
LESRAEAPEKLEGEQELGSGGIPEGLQEEGEESGEESEADELGETLPDSTPLVLFPGSAA
LSEWGPAGEERPSPQGEARQEGWDPTILASEGLGTHPSEEEGRDEEEGHSRDSDLSEEFE
DLGTEASLLPGVPGEVAEPLRQVPQLLLEPAVWDRDEESDGFADEEESGEENEEEEEGRG
PGSSVGSLQSPCGPQRGDLVESETVGVSAPMTALETESQDSAEPSSSEEESDLVPLDRED
KVSGPLETPSGVEDMGHQGAGETFGVNGQDPSWEESQHLNGGLVTRLEQSEGGGQGKPEA
PEGERGSPLEVEEGGSLKAPWAGVPLRLGQGQYLKFTQREGEGDSWSSGED
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggagggctgcctgggagaggagtcttttcagatgtgggagctcaaccggcgcctggag
atctacctgtcccgggtcaaggcgctagaggagcagaatgaactgctgagcgcagagctc
ggaggtcttcgggcacagtctgcagacgcctcttggcgggcccgcgccgatgacgagctg
gcggccttgcgggccctcgtggaccagcgctggcgggagaagcacgcggccgaagtggcg
cgcgacaacctggcggaagagttggagggtgtggccggccgatgccagcagcagcgtctg
gcccgcgagcaggcggcggaggaggcagcccgcagccggcgggccgtcgaggccgagaaa
tgtgcccagacctggctgagcaaccaggctgcggatctggagcgcgagctagaggccctg
cgcgcggagcacgaggaggagcgcgcctgcctgaacgcgcaggccgcctgcgcnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnncgccggccccagaggtggaggagctggcgcag
cggctgggcgaggcgtggcgcggggcagtgcgcggctaccaggagcgcgtggcacacatg
gagacttcgctgggtcaggcccgcgagcgcctgggccgcgcggtgcagggcgcccgtgag
ggtcgcctggagctgcagcagctgcaggcggagcgtgggggcctccaggagcgcagggct
gcgctggagcagaggctggagggccgctggcaggagcgacttcgtgccactgagaagttt
cagctggcggtggaggccctggagcaggagaaacaaggcctacagaatcagatcgcccag
gtcctggaaggtcggcagcagctggcacacctcaagatgtccctcagcctggaggtggcc
acatacaggacgctcctggaggctgagaacacccggctgcagacaccaggcagtggttcc
aaggcttccctcggcttccaggacccaaagccagagctgcattttcttgggaccccagaa
ggccggcgtctggcacctttactccctgtcctgagcccaacccctctcacctcacccttg
cctgataccattaggacacctatgccagcctttccgaagagacaggaattcctccaggct
tgtacccccaccttggccagcacccccatctcacccacaccccagactccctaccctgct
acagatacagagatcagagcccaggaggcccctctctccctcctccagtcacagggtggg
aagcaagaggctccagagcccctgtgggctgaagctaaggtggccatccctgccagcatc
cttccaggaccagaggagcctgggggcaagcagcaaaaggccagtccaggccagtcccct
gaggatcatgtctccttggccccaccccccaaccctgaccaccctagtttagaggccaaa
gaaggagagcccagtgggtctgggatgtccagcatatcccaggaggaaggtgaagggcaa
atgtggggactgaaagacgaagaagcaaccatagaggtgaaagtagggagcaccttacag
caggaaacgtggcaagaagagggagatgtggacagggaggaaatccaggaaccccagagt
cttttggaaaaagaaactccgaaggctctggaagaggagattcaagagccactaatgtct
ctggaaaaacagagccatgagacacagagatctctagagaaggagaatcaagactctctg
aggtctttagaaggagagaacttggaaacaccaaaaactctagaaaaggagaatcaagag
ctgttgaaatctttagaagaaaaaggtctagagatagtcagttctgtagaaaaggagact
ctggaactgcgtacgcccatagaaaaagaagactcacagacattgcaatctctagaaaag
gagaatcaagaattcctgaggtctgttaatgaaaacctagagacatttttatttccagga
aaggaaaatcaagaattagtgaggtctctagaagaagagaacttagagtccttgagagct
ctagaaaaggagagtcaagaaccactgagatctcaagaagtagaggaccaggaggcattg
ggacctctagcaaaagaaaatcaagaaccactgagatctcaagaatctcaagaagaagag
aaccaggagacattgagaactctagagaaagagactcaagagtcactgaagtctctagaa
gatgagaatcaggagatcctagaaaatacagatcaggagccactaaagtctctaaaaatt
gagaaccaggaaacattgagaactttagagaaagagactcaagagtcactaaagtctcta
gacgatgagaatcagaagatcctagaaaatatggatcaggagccactaaagtctctaaaa
cagaagacattgaagcctcttgaaaaagagaatcaagagctgttgaggtctctaaaagaa
gacagtgtagagggagtgaaatctttagaaataaagaatctaggatcactgaagtctgca
gaaacagaagccttgagaatattaaaacctccagaaactgaagagccactctggtcccta
gaagaagagaatcaggagacaatgaaggctctagaaaaggaaattcaagaaccactcgtg
tctgtggaagagacccaagagacattgaaacccctagaaaaggagaatcaagaaccactg
agatctctgggagagtgggacctagaaaatttgaaatcttcagaagaggtggacaaggaa
agtccaaagtatctggaagaggaggggaacctggagaggggagagaatactgatttgctg
aggtctctggaagatgagggacaggagctaccactgtctgcaaatcagaagaggtgggaa
gatgtggtggggggggaccaagagctgagccatgaccccccacctgggagggatgaagtg
gaaaataaggatgaagcagaactgggcccgaaggagcaggatgacctcgatgggaaggag
gaggttgtagagcaggtagagctactgctgaatgccgcagtggaggcagggaacacaggt
gaagggtacccagggagccctgagcctgaagagcagagggtcccagttgagggagccatg
ggggaaggaggtgctgagggccaccaggaccctgaagggcaaccagatcaggtgggggcc
ccaggcctcggagctccccaagggatgccagagatggtagaagccatgttaaaagatgag
gatgtggctccagggagtgacccagcctccctacaggtcgccttggcatcagagacagcc
atgggtgagtccgttgtgggaactgaggagggtctggagcaggaggctgtagcgctggag
gacccaggccacctggccagagaggaagtgatggagccacccctaggggaggaaggtttg
gaggcaaagaaagtacagggcttgggagagcccgggaagggcctaaaggaggcagatgct
ctggagtcagagctctcccagctgcctggggagagcagagacccccggaaacctgaggaa
tctgagagctgggcggagactgagtctgaagcagcctggggggcagaggaggggctccct
gctaaaaccctgtgccttgatggaatcgatgcccctcagcccaggccagaggaggatgcg
aaaccagtgccagggccccccagcccaaggcccccggagccctgggtgcctacctcactc
cctgaagatgcccctgggccccagcctcagactgaggggaaacaggaggctagctggggg
ctggaaagtagggctgaggccccagaaaagctggagggtgagcaggagttgggttctggg
gggatccctgagggtctccaggaggagggggaagagagcggagaagagagtgaggccgat
gagctaggggagactcttcccgactccactcccctggtcctcttccccgggtccgcagcc
ctctctgagtggggcccagctggagaggagaggccctcccctcagggggaggccagacag
gaaggctgggatcccaccatcctggcctctgagggccttgggacccacccctctgaagag
gagggtcgagatgaggaggaggggcacagccgtgattcggacctgtccgaggagtttgag
gacctggggacggaagcctctcttcttcctggggtccctggggaggtggcagaacccctg
aggcaggtgccccagttgctgctggagcctgcggtctgggatcgggatgaggagtccgat
gggtttgcggatgaagaagagagtggggaggagaatgaggaggaagaggaggggaggggg
ccagggtcctctgtgggcagcctacagagcccatgtggcccgcagagaggagaccttgtg
gagtctgagactgtgggggtcagtgcccccatgactgccctagagactgagtcccaggac
agcgctgagccttccagctcagaggaggagtctgacttggttcccttggacagggaggac
aaagtctctggccccctggagacccccagtggggtggaggacatgggccaccagggcgca
ggggaaacctttggtgtcaatggccaagatcccagctgggaggagtcccagcacttgaat
ggggggctggtgaccaggctggagcagtctgagggaggagggcaggggaagccggaggcc
cctgagggggagcgagggagccccttagaggtggaggaggggggttccctgaaggcccct
tgggcaggggttcctcttcgcctgggccagggccagtacctcaagttcactcagagggaa
ggagagggagattcgtggtcctcaggggaagactag
DBGET
integrated database retrieval system
