Trichechus manatus latirostris (Florida manatee): 101340595
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Entry
101340595 CDS
T05135
Name
(RefSeq) contactin-4
KO
K06762
contactin 4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101340595
Cell adhesion molecules [BR:
tmu04515
]
Immunoglobulin superfamily
Contactins
101340595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Sp38
Ig_C17orf99
V-set_CD47
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
101340595
NCBI-ProteinID:
XP_004368333
UniProt:
A0A2Y9D5S7
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MRLPWELLVLQSFMLCLADDHTLHGPVFVQEPSHVMFPLDSEEKKVRLNCEVKGNPKPHI
RWKLNGTDVDIGMDFRYSVVEGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHAGELSYAWIFNEYPSYQDNRRFVSQETGNLY
IAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPEIVQTAKG
TTVKLECFALGNPVPTIIWRRADGKPIARKARRHESNGILEIPNFQQEDAGLYECVAENS
RGKNVAKGQLTFYAQPNWIQKINDIHVAIEESVFWECKANGKPKPTYRWLKNGEPLLTRD
RIQIEQGTLNITIVNLSDAGMYQCVAENKHGVVFSSAELSVIAVGPDFSRTLLKRVTLVK
IGGEVVIECKPKASPKPMYTWKKGRDILRENERIIISEDGSLRIVNVTKSDAGSYTCIAT
NRFGTASSTGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWTFNGYLI
DFDKDGDHFERVGGQDSAGDLMIRNIQLKHAGKYVCLVQTSVDKLSAAADLIVRGPPGPP
EAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVNTVPELIDGKTFTAT
VVGLNPWVEYEFRTVAANVIGIGEPSQPSEKRRTEEALPEVTPANVSGGGGSKSELVITW
ETVPEELQNGGGFGYVVAFRPYGKKSWMKTVMASADASRYVFRNESLSPFSPFEVKVGVF
NNKGEGLFSPITTVYSAEEEPTKPPPSIFARSLSATDIEVFWASPLEKNIGRIQGYEVKY
WRHDDKEENARKIRTIGNHTSTKITNLKGSALYHLAVKAYNSAGTGPSSATVNVTTRKPP
PSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVEL
SLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYVRGSGASTSNACTLSAISTIMISL
TARSSL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgccatgggaactgctggtactgcaatcattcatgttgtgcctggcagatgac
cacacgctgcatggccctgtttttgttcaagagccaagtcatgtaatgtttcctttggat
tctgaggagaaaaaagtgaggctcaattgtgaagttaaagggaatccaaaaccacatatc
aggtggaagttaaatggaacggatgttgacattggtatggatttccgctacagtgttgtt
gaaggcagcttgttgatcaataaccccaataaaacccaagatgctggaacgtaccagtgc
atagcaacaaactcctttggaacaattgttagcagagaagcaaagcttcagtttgcttat
ctggaaaactttaaaacaagaacccgaagcaccgtgtccgtccgtcaaggccaggggatg
gtgctcttgtgcggccccccgccccacgctggagagctgagttatgcctggatcttcaat
gaatacccttcctatcaggataatcgccgcttcgtttctcaagagactggaaatctgtat
attgccaaagtagaaaaatcagatgttgggaattatacctgtgtggttaccaatactgtg
accaaccacaaggttctaggaccacccacacctctaatattgagaaatgatggggtgatg
ggcgaatatgagccaaaaatagaagtgcagttcccagaaatcgtccagactgccaaagga
acgacggtaaagctggaatgctttgccttgggaaatccagtaccaactattatctggcga
agagccgatggaaaacccatagcaaggaaagccagaagacacgagtcaaatggaattctt
gagatccccaattttcagcaggaggatgctggattatatgaatgtgtggctgaaaattca
agagggaaaaatgtagcaaagggacagttgactttttatgctcaacctaactggattcaa
aaaataaatgatatccacgtggccattgaagaaagtgtcttttgggaatgtaaagcaaat
ggaaagcccaagcctacatacaggtggctaaaaaacggtgaaccactgttaactcgggat
aggattcaaatcgaacaaggaacgctcaacataacaatagtgaacctctcagatgccggc
atgtatcagtgtgtggcagaaaataaacacggagttgtcttttccagcgcagagcttagt
gttatagctgtgggtccggatttttcaagaaccctcttaaaaagagtaactcttgtcaaa
ataggaggggaagttgtcattgagtgtaagcccaaagcttctccaaaacctatgtatacc
tggaagaaaggaagggacatattaagagaaaatgaaagaattatcatttctgaagatgga
agcctcagaatcgtcaatgtcactaagtcagatgctgggagttacacctgcattgccact
aaccgttttggaactgctagcagtactggcaacttggtggtgaaagatccaacaagggta
atggtacccccttccagcatggatgtcactgttggagaaagtattgttctgccgtgccag
gtaacacatgatcactcactagacatcgtgttcacttggacgtttaatgggtacctgata
gacttcgacaaagatggggatcactttgaaagagtcggagggcaggattcagctggtgat
ttgatgatccgaaacatccagctgaagcatgctgggaaatacgtctgcctggtacaaaca
agtgtggacaagctatcagctgctgcagacctgattgtaagaggtcccccaggcccccca
gaggctgtgaccatagatgaaatcacagacacaaccgctcagctctcctggagacccggg
cctgacaaccacagccccatcactatgtatgtcattcaagccaggactccgttctccgtg
ggctggcaagctgtcaacacagtccctgagctcattgatgggaagacattcacagcaacc
gtagtgggtttgaacccttgggtggaatacgaattccgcacagtcgcagccaatgtgatt
gggattggagagccaagccagccctcagagaaacggaggacagaagaggccctccctgaa
gtcaccccagctaacgtcagtggtggtggaggcagcaaatctgagctggttataacctgg
gagacggtccccgaggaattacagaacggtggaggctttggttacgtggtggccttccgg
ccctatggcaaaaagagctggatgaagacagtgatggcctcggctgatgcttccagatac
gtgttcaggaatgagagcctgtcccccttctctcccttcgaggttaaagtgggcgtcttc
aacaataaaggagaaggcttattcagtcccatcacaacggtttattctgcagaagaagaa
cccaccaaaccaccacccagcatctttgccagaagcctttctgcaacagacattgaagtt
ttctgggcctcacccctggagaagaatataggacggatacaaggttatgaggttaaatat
tggagacatgatgataaggaagaaaatgctagaaaaatacgaacaattggaaatcataca
tcgacaaaaatcaccaacttaaaaggcagcgcgttgtaccatttagccgtcaaagcgtac
aattccgccgggaccggtccctccagtgcgacggtcaacgtgacaaccagaaagccacca
ccaagtcaaccccctggaaacatcatatggaattcgtcagactccaaaattatcctgaat
tgggatcaagtgaaggcgctggataatgagtcagaagtaaaaggatacaaagtcttgtac
agatggaacagacaaagcagtacatctgtcattgaaacaaataaaacatcggtggagctc
tctttgccttttgatgaagattatataatagaaattaagccattcagtgatggaggagat
ggcagcagcagtgaacagattcgaattccaaagatctcaaatgcctacgtcagaggatcc
ggcgcttccacttcgaatgcgtgtacactgtcagccatcagtaccataatgatttccctc
acagccaggtccagtttatga
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