Trichechus manatus latirostris (Florida manatee): 101340975
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Entry
101340975 CDS
T05135
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101340975
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101340975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Lectin_C
Ion_trans
GPS
Gal_Lectin
Motif
Other DBs
NCBI-GeneID:
101340975
NCBI-ProteinID:
XP_012411377
UniProt:
A0A2Y9G0L6
LinkDB
All DBs
Position
Unknown
AA seq
2376 aa
AA seq
DB search
MSALGLVLLGLILSFRATTAGPVEGNLCSKSQVAFRDACYEFVPLGRTFHGAQSWCEGQG
GHLVFIRDEGTQQFLQKHISQDREWWIGLTGSLVLNGTTEGPGTWLDTSNVTYSNWGGGQ
AVPAPDTCGYIGRGPSSKWATTDNCSQALAFICESGQCQGLQACQVAADGTYFGDLCPTL
GSYLWVQYQCLEGLQLTVSNESFIFENITISLTWLLSPYSGNLSCIINMGDGHTFDPYYP
PSLSSNVIYQFTSPGEFTVFAECTTSEWHVTAQKQVTMRDKMERLSVTGCSSLSRSGNSH
LCQTVFGDPLWIQVELDGGTGVTYTVLSGNITLTECTTLRGSLPYNLTLDRAAQQLMGPG
MHHLEIQAISNTTTSVLSSNITVHFMEPLSGLQASWASDHLELGEDLLINISVAHGIPEE
LTFEVTGLNANFSHEEESFGEPFGIHHVAVPAEGTWGHLISRLLFLQKEKGKIEVYIEPG
RYVDPFTTVTLGWPDNDKNLHFQWSCGRCWAQWSDCVQRRLLSTDQRELVVPPSCLPPPD
SAVTLSLAVRRGQKLEDREEQCLYVSAPLELRPRVSCEQNCGPVSADEDMVLGVTMGGDA
PVAMFSWYLDDTSLEKAEPLPAACTLRGFWPSSLTLLQSNTSTLRLNSSFLQTWEEGVRI
RATALARHAYGQDTYVISNLPPPEVPACTITPEEGDILTSFTISCNASTAPAPLQYCFCL
ESGSCLHCGPEPALASVYLPLGKESNDFMLTVVISVTDRAGSRQQTYAMVKVRFGDTRVE
DAAFQASVSETITAVLEGEHGSEQLFQLAKSVSSVLNQECPGNGFGQLLEMDTRKKVREH
VLGSLSAITVTLEEMQRVQRLAEVLREVTHRSEELTPLAQWEASRALQHASEALLAASAR
AHPKDQRRQAATRDLFQAVGSVLEASLSDRPEEPREAYSSQTATVPQLLGVVGHVQTALL
QGSLPGGLPAMLATPSMSVYTNRIQPQSWRGPSVHVAAANSATFTLPASSSLSSIADSHE
PVDIRMTSFPKSPFLAHSRFDVSGTVGGLHLTSPSGQLIPVKNLRENIEILLPRLSEGYG
EPTVLNLTGPEALRVNLTSGEAALGIHLHWRPRIPLTLTLGYGYHPNETNHDATTHLPPT
ADPDGLSTWILRPEDLHFGEGVYYLTVVPACDLELTAVRDLTVGITTFLSHCVFWDEGQE
TWDSSGCQVGPRTTPSQTHCLCNHLTFFGSTFLVMPNAIDVFQTAELFATFEDNPVVMTT
VGCLCVAYVLVVIWARRKDAQDKAKVKVTVLEDNDPFAQYHYMVTVYTGHRRGAATSSKV
TVTLYGLDGESEPHHLADPDTPVFERGGMDVFLLSTLFPLGDLRSLRLWHDNSGHQPSWY
VSRVLVHDLAMDQKWHFLCNSWLSIDVGDCVLDKVFPVATEQDRKQFSHLFSMKTSSGFQ
DGHIWYSIFSRSPWSNFTRVQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFT
WQEVMIGLESSLLMFPINLLIVQIFRNTHPRATKEQKTGKWGWGSSSLPPSPQPVEDGLL
TPEAVIKDMCRLVSSLFKALKVPSPASGWDSANLMDINKLLALVEDVICTQNAAGQVFGE
EAKKREDPLTLARGSIHVKEKMQCLIPEVSLGGSQKDRVYRQCLYLQLEHMEHELRLLGP
RGFPQHQSHARALRQLQTLKDNLGGQPGIPGPARPSSPPMSRPPCGLPWWCILVGWLLVA
ATSSVAAFFTMLYGLHYGRASSLKWLISMAISFVESVFVTQPLKVRSHQKEVSIVTKVEP
GFYQPFGDCPHVLFFTDPYALFRAQRNSRRDIYQPPLTTDVEKMKITHLKEQRAFALIRE
ILAYLGFLWMLLLVAYGQRDPSAYHFNRHLQHSFTQGFSDVLSFQQFFTWANTTLVSNLY
SHHPGFITDGNSKLVGSAQIRQVRVRESSCPLAEQLQASLDGCRAPYSLDVEDLSDYGEG
WNASTPNSSNGFPQAWQYQSQSQRRGYPIWGKLTVYGGGGYTVSLGTDRQSASRILRYLF
DNTWLDTLTRALFVEFTVYNANVNLFCIVTLTLETNALGTFFAHANLQSLRLYPFTDGWH
PFVVAAEVLYFLFLLYYMVVQGKLMRKQKWCYFCSKWNLLELAIILASWSALAMFVKRAV
LAERDIHHYRGHREEGISFSETAAADAALGYIIAFLVLLSTVKLWHLLRLNPKMNMIASA
LCRAWGDISGFIIVILVMLLAYSITSHLIFGWKLLSYKTLFDAVETMISLQLGIFNYQEV
LDNSPVLGSLLVGSCIVFMTFVVLNLFISVILVAFSEEQKHHQLSEEAEIADLLLMKILS
FLGIRGKREEPQSSSEKLGELTEAGAPELAHAAPKV
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactgggcttagtactcttggggctcattctgagttttagggccaccactgct
gggccagtggagggcaacctttgctctaagagccaggtggccttcagagatgcttgctat
gaatttgtaccacttggacgcaccttccatggtgcccagagctggtgcgaggggcaagga
ggccatttggtcttcattcgggacgaaggcacccagcagtttctgcagaagcacatctcc
caggacagggaatggtggattggactcacagggagtttggtgctgaatggaaccacagaa
gggcctgggacttggttggacacctctaatgtgacctacagcaactggggtggagggcag
gctgtgcccgcccccgacacctgcggctacatcgggagaggtccttcctccaagtgggcc
accacagacaactgctctcaagcgttagccttcatctgtgagtctgggcagtgccagggg
ctgcaggcatgccaggtggcagcagacggaacctactttggagacctttgccccactctg
ggcagctacctgtgggtgcagtaccagtgcctggaaggcctccagctgacagtgtccaat
gagagtttcatctttgagaacatcaccatctccctgacatggctcctctctccctacagt
ggaaacctgtcctgtataattaatatgggagatggacacacttttgatccttactatccc
cccagtttgtccagcaatgtgatctaccagttcacatctcctggggaattcacagtgttt
gctgagtgcacaaccagcgaatggcatgtgacagctcagaagcaagtgacaatgagagac
aagatggagaggctcagtgtgactgggtgttccagcctgtccaggtcagggaacagccat
ctctgtcagactgtctttggggaccctctctggattcaggtggagctcgatggaggaaca
ggagtgacttacactgtgctgtcgggtaacataaccctgacagagtgcaccaccctgagg
ggctcacttccctacaatctgaccctggacagagcagcccagcagctgatgggcccaggg
atgcaccacctggagatccaagccatcagcaacaccaccacctctgtgctctccagcaac
atcaccgtccacttcatggagccactgtcagggctacaggcctcctgggcttctgaccac
ttggaacttggagaggacctactgatcaacatctcagtggctcatggcatccctgaggag
ctgacctttgaggtgacaggactcaatgcaaacttctcccatgaggaagagagctttggg
gaaccatttgggattcaccacgtggcagttcctgctgaaggtacttggggtcacctcatc
agccgactgctttttctgcagaaagagaaagggaaaatcgaggtatacattgaacctggt
cgatatgtggatcctttcacgacagtgactctgggctggccggacaatgacaagaattta
cacttccaatggtcatgtgggcgttgctgggctcagtggagcgactgtgttcagaggcgg
ctactcagcacagaccagagggagctggtggtcccaccctcctgcctgccaccgccagac
tctgctgtgaccctgagcctggctgtccggagaggtcagaagctagaggacagggaggag
cagtgcctatatgtgtccgcgcccctggaactcaggcctcgggtcagctgcgagcagaac
tgcgggccagtgagtgctgacgaagacatggtgctcggggtcacgatgggaggtgatgcc
cccgtggccatgttcagctggtatttagatgacacctcgctagagaaggctgagcccctt
ccagctgcctgcacactcagaggattttggccaagttctctaaccctccttcagagcaac
acctccacgctgcggctgaacagctccttcctgcagacctgggaagagggcgtccgcatc
agagccacagcactggccaggcatgcctatgggcaggacacctatgtgatcagcaacctg
cctccccccgaggtgccagcctgcaccatcaccccagaggagggcgacattctgacgagt
ttcaccatctcgtgcaatgcctccacggccccggccccactgcagtactgcttctgtctg
gaatcaggttcctgcctacactgtggccccgagccagccctcgcatcagtttatctacca
cttggaaaggaaagcaatgactttatgctgacagtggtcatttctgtcactgaccgtgca
ggcagcaggcagcagacttatgccatggttaaggtaaggtttggagacacacgtgtggag
gatgcggcgttccaggcttcagtgtcagagaccattactgctgttctggaaggggagcat
ggctctgagcagcttttccagctggccaagtctgtgtcctccgtgctgaaccaggagtgc
ccagggaatggctttgggcagctgctggaaatggacaccagaaagaaggtcagagagcat
gtgctggggtctctgtctgccatcactgtcaccctggaggagatgcagagggtgcagagg
ctggctgaagtgctcagagaggtgacccaccgcagtgaggaactcacacccttggcccag
tgggaggccagccgggctcttcaacatgccagtgaggccctgttggcagcgagtgccagg
gcccatcctaaggaccagagacgccaggcagccaccagggacctgtttcaggctgtgggc
agcgtgttggaggcttccctgagtgatagaccagaagagcccagagaggcctacagcagc
cagactgccacagtgccacagctgctcggcgttgtggggcacgtacagacagccctcctg
caggggagcctgcctgggggcctgccagccatgctggccaccccctccatgtctgtgtac
acaaacagaatacagccacagagctggcgaggcccctctgtgcatgtcgctgctgctaac
tctgcgaccttcactcttcctgcttcctcctccctcagctctatagcagacagtcatgag
cctgtggacatacggatgacgagtttcccaaagagccccttcctagcccacagccgcttt
gatgtcagtgggactgttggtggcctccatcttaccagccctagtggacaactcatacct
gtgaagaatctgcgggagaatatcgagatcctgctgccccggctttcagaaggatatggc
gagccgactgtattgaacctgaccggccctgaggctttgcgggtgaacctgacttcaggg
gaggccgctttggggatacatttgcactggagacctagaatcccactcacactcaccctg
ggctatggctaccaccctaacgagaccaaccatgatgccacaactcaccttccaccaaca
gctgatccagatggactgtccacatggatcctgagaccagaggacctgcattttggagaa
ggtgtctactatttgactgtggtccctgcctgtgacttggagctgactgccgtcagggac
ctcacagttggcatcaccaccttcctgtcccattgtgtgttctgggatgagggccaggaa
acctgggacagctctgggtgccaggtgggaccacggaccaccccttcccagacacactgc
ctctgcaaccacctcaccttctttggaagcacattcctggtgatgcccaacgccattgac
gtcttccagactgctgagctctttgccaccttcgaggataaccctgtggtcatgaccacg
gtgggctgcctctgcgtggcctacgtgctggtggtgatctgggccaggaggaaggacgct
caggataaggccaaggtaaaggtcacagtgctggaggacaatgatccctttgcccagtac
cactatatggtgacagtctacactggacatcggcggggggcagccacctcctcaaaggtg
acggtcactctgtatggcttggatggagagagtgagccccaccacctggcagaccctgac
accccggtttttgagcgaggaggaatggatgtcttcttgctctccaccctgttccccctg
ggggacctgcggagcctcaggttgtggcatgacaactcagggcaccaaccatcctggtac
gtgagccgggtgctggtccatgatctggcaatggaccagaaatggcatttcctctgcaac
tcttggctgtccattgatgttggggactgcgtccttgataaggtgtttccggtggccacg
gaacaggacaggaaacaattcagccacttgttttccatgaagacctcctctggcttccag
gatggacacatttggtattccatcttcagccgctccccttggagcaacttcactcgtgtc
cagagggtgtcctgctgcttctccctgctcctctgcaccatgctgaccagcatcatgttc
tggggtgtccccaaggacccagctgagcaaaagatggacctgggcaaaattgaattcact
tggcaggaagtgatgattgggctggagagctcactcctcatgtttcccatcaacctcttg
atcgttcagatctttagaaacacccatcctcgggccaccaaggagcagaagactgggaaa
tggggttgggggtcctccagcctgcctccctccccacagccagtggaagatggtcttctg
acccctgaagcagtgatcaaggatatgtgtcgacttgtcagctcactgtttaaagctctc
aaggtgccctcccctgcctcaggctgggactcagcgaacttgatggacatcaacaaactt
ctggccttggtggaagatgtcatttgtacgcagaacgcagcagggcaggtgtttggtgag
gaagctaaaaaaagagaggaccctttaacacttgctcgtgggtccatacacgtcaaagag
aaaatgcagtgcctcatacccgaggtgtccctgggtggctctcagaaggacagagtctac
aggcagtgtctttacctccagctggagcacatggaacatgagctgcggctgctggggccc
cgtggcttcccccagcaccagagccatgcccgggccctcaggcagctccagaccctgaag
gacaacctggggggacagccaggcatcccgggcccagcacgccccagctccccaccaatg
agcagacccccttgtggcctgccctggtggtgcatcctggtgggctggcttctggtggcg
gccaccagcagtgtggcagccttcttcaccatgctctacggcctgcactatgggcgtgcc
agctccctcaagtggctcatctctatggcgatttccttcgtggagagcgtgttcgtcacc
cagcccctgaaggtcaggtcccatcagaaggaggtatctatagttaccaaagtagagcct
ggtttttaccaaccatttggggactgtcctcatgttctttttttcacagatccctatgcc
ttgttccgagcacaaagaaacagcagaagggacatctaccagccacctcttaccactgat
gttgagaagatgaaaatcacccacctcaaggaacagagagcatttgccctaatcagagag
atcttggcatacctgggcttcttgtggatgctgctactggtggcctatggacagagagac
cccagcgcctaccacttcaacagacaccttcagcacagcttcactcaaggcttttccgat
gtgctgagcttccagcagttcttcacatgggccaacaccacccttgtaagcaacctgtac
agtcaccacccaggctttatcaccgatgggaactccaagctggttggcagtgcccagatt
cgccaagtgagggtccgggaaagctcttgccctcttgctgagcagctgcaggcttctctt
gatggctgccgggcaccatattccctggatgttgaagacctgtcagactatggggaaggc
tggaacgcctccacccccaatagcagcaatggctttccccaggcttggcagtaccagagc
cagagccagcgccgaggttatcccatctggggcaaactcactgtgtatggcggaggaggc
tacacagtctccctggggactgatcgccaaagtgcttcaagaattctccggtatctcttc
gacaacacctggttggacaccctgaccagagctctgtttgtggagttcactgtctacaat
gccaatgtcaacctgttctgcatcgtcactttgaccctggagaccaacgccctgggaact
ttttttgcacatgcgaacctccagagcctccgcctgtaccccttcaccgatggctggcac
cccttcgtggtggcagcagaggttctctacttcctcttcctcctctactacatggtggtg
cagggcaagctcatgaggaagcagaaatggtgctatttctgcagcaagtggaatcttctg
gaactggccatcatcctggccagctggagtgccctggcgatgtttgtgaagagggctgtc
ctagcggagcgtgacatccatcactacaggggccacagggaggaggggatcagttttagt
gagacagcagcagctgacgctgcccttggctacatcattgccttcttggtactcctgtct
acggtgaagctatggcatctgctcaggttgaaccccaaaatgaacatgatcgcatcagcc
ctgtgccgtgcctggggcgacatctcaggctttatcatcgtcatccttgtcatgctcctg
gcttactccatcacttcacacttaatatttggttggaaactcctttcctacaaaaccctc
tttgatgcagtggaaacaatgatcagccttcagctgggaatcttcaactaccaggaggtt
ctggacaatagcccagtgcttggctccctcctggttgggtcctgcattgtgttcatgaca
tttgtggtgttgaatctatttatctctgtcatcctggtggccttcagtgaggagcaaaaa
caccatcagctatcggaggaagcagagattgccgatttgctactgatgaaaatactcagt
ttcctgggcattagaggtaaaagagaggagcctcaaagcagcagtgagaagcttggagag
ctgacagaagctggggcccctgaactggcacacgctgcacccaaggtttaa
DBGET
integrated database retrieval system
