Trichechus manatus latirostris (Florida manatee): 101341013
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Entry
101341013 CDS
T05135
Name
(RefSeq) short transient receptor potential channel 1 isoform X2
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04360
Axon guidance
tmu04724
Glutamatergic synapse
tmu04726
Serotonergic synapse
tmu04929
GnRH secretion
tmu04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101341013
09154 Digestive system
04972 Pancreatic secretion
101341013
09156 Nervous system
04724 Glutamatergic synapse
101341013
04726 Serotonergic synapse
101341013
09158 Development and regeneration
04360 Axon guidance
101341013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101341013
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101341013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
101341013
NCBI-ProteinID:
XP_004385124
UniProt:
A0A2Y9E2S3
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MMAALYPSTDFSGASSSSLPSSPPSSWSPNKVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSTDALLVAID
SEVVGAVDILLNHRPKRSSRPTVVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEQLQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIVPSPKTICYIISSLSKWICSHTSKGRVKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggacttctcgggcgcctcctcctcctccctgccg
tcctccccaccctcttcttggtcgccgaacaaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctacagcttcttttggactacggttgtcagtccacagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcggccaaaacgatcatcaaga
ccaactgtagtaaaactaatggaacggattcagaatcctgagtattcaacaacgatggat
gttgcgcctgtcattttagctgctcatcgtaacaactatgagattcttacaatgctgtta
aagcaggatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgttct
gcaaaaaacaaaaaggacagcctccgacattccaggtttcgccttgatatttatcgatgt
ttggccagtccagctctgataatgttaacagaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaactaagccttgtggaggtggaattcaggaatgattatgag
gaactagctcggcaatgtaaaatgtttgctaaagatttgcttgcccaagcccggaattca
cgcgaattggaggtgatcctaaaccacacatctagtgatgagccgcttgacaaacgggga
ttactagaagaaaggatgaatttaagtcgtttaaaactcgctataaaatataaccaaaag
gagtttgtctcccagtctaactgccagcagtttctgaacaccgtttggtttggacagatg
tcaggttaccgacgtaagcccacctgtaagaagataatgactgttttgacagttggcatc
ttttggccagttctgtcgctttgttatttgatagctcccaaatctcaatttggtagaatc
attcacacaccttttatgaagtttattattcatggagcatcatatttcacgttcctgctg
ttactaaacctatactctcttgtctacaatgaggataagaaaaacacaatggggccagcc
cttgaaagaatagactatcttcttatcctgtggattattgggatgatttggtcagacatt
aaaagactctggtatgaagggttggaagactttttagaagaatctcgtaatcaactcagt
tttgtcatgaattccctttatttggcaacctttgccctcaaagtggttgctcataacaag
tttcatgattttgccgatcggaaggactgggatgcgttccatcctacactggtggcagaa
gggctttttgcatttgcaaatgttctaagttatcttaggctcttttttatgtatacaacc
agctctgtcttgggtccattacagatttcaatgggacagatgttgcaagattttgggaaa
tttcttgggatgttccttcttgttttgttttcgttcacaattggactgacacaactgtat
gataaaggctatactccaaaggagcagaaggactgtgtcggcatcttctgtgaacagcaa
agcaatgacacctttcactcgttcattggcacttgctttgccttgttctggtatattttc
tccctagcacatgtggccatctttgtcacaagatttagctacggagaacagctgcagtcc
tttgttggagctgtcattgtgggcacttacaacgtggtggttgtgatcgtgcttacgaag
ttgctggtggcaatgcttcacaaaagctttcagttgatagcaaatcatgaagacaaagaa
tggaagtttgctcgagcaaagttgtggcttagctactttgatgacaaatgtacattaccc
ccgcctttcaacatcgttccctcaccgaagactatctgctatataattagtagcctcagt
aagtggatttgctctcatacatcaaaaggcagggtcaagcggcaaaacagtttaaaggaa
tggagaaatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgtttagtg
catcgttacttgacttctatgagacagaagatgcaaagtacagatcaggcaactgtggaa
aatttgaatgaactgcgccaagatctgtcaaaattccgaaatgaaataagggatttactt
ggctttcggacttctaaatatgctatgttttatccaagaaattaa
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