Trichechus manatus latirostris (Florida manatee): 101341116
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Entry
101341116 CDS
T05135
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101341116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101341116
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101341116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
zf-B_box
Motif
Other DBs
NCBI-GeneID:
101341116
NCBI-ProteinID:
XP_004368424
UniProt:
A0A2Y9D5Y8
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MGRRRATGGEPRRRELRGQKVKDQNPARREEEEADVLEDEKPPKKTLLSKISQGKKRRGC
SDPRGPADDGPTKKKVAKVTAKSRHLKVVKDEAVSDGEDFRNFPAAHKKAHHPKREATID
KDSSEGEDEDESEGDWEEVEELSEPVPGDVGENAVFSKSVLPMNPVEIEIETPEQAKTRE
RSEKVKMEFETYLRRMMKRFTKEVHEDTHKVHLLCLLANGFYRNRICSQPDLRAIALSII
PTRFTKVPQRDVDVCYLSNLVKWFIGTFTVNADLSYNEQDGLQTTLERRFAIYSARDDEE
LVHIFLLILRALDLLTRLVMSLQPIPLKLSAAKGKKPSKQRSIEGPGSSSETPSHVPENH
TKPKASKGTKQEETFSKDTGNPGAKGKRGKAATGRKKQRAPSSSEETGKGEEQQENQRKR
RGRERHMTSRVSYKEESGSDKANSDSDFELSSGEAHSPSDEDSDPDFLRQKRAPAPKRTK
AGSKSDSQTSRQSCPNPAASSSSSSNKRGKKIPSGVEEVEGGKAAGVDQWLEVFCDKEEK
WVCVDCVHSVVGEPLTCYRYATKPVTYVVGIDSDGWVRDVTQRYDPAWMTMTRKCRVDAK
WWAETLRPYQSPFVDREKKEELEFQTKHLDQPLPTAIGTYKNHPLYALKRHLLKYQAIYP
ETAAILGYCRGEAVYSRDCVHTLHSKDTWLKQARVVRLGEVPYKMVKGYSNRARKARLAE
PQLQDYNDLPLFGRWQTEEFQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLHR
VARKLDIDCVQAITGFDFHGGYSHPVTDGYIICEEYKEVLLDAWEKEQALIEKKEKEKKE
KRALGNWKLLAKGLLIRERLKLRYGAKSEASLHTDAGGGLSSDEEEGTSSQAEAARILAA
SWPQNRETEDQTQKRSKKTRRGKKEAASHLFPFEKL
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggagacgtgcgaccggcggggaaccgcggcgacgcgaactacgcgggcagaag
gttaaagaccagaacccggcccggcgtgaggaggaggaggcggatgtccttgaagatgag
aaacccccaaagaagacccttctttccaaaatttcacaaggaaagaagaggagaggctgc
agtgatcctcggggcccagctgatgatggtccaacaaagaagaaagtagccaaggtgact
gctaaatccagacacctcaaggttgtaaaggatgaagccgttagtgatggggaagatttc
aggaacttcccagctgcccacaagaaggcacaccatccaaagagagaggctaccattgac
aaagatagcagtgaaggagaagatgaggatgaaagtgaaggtgattgggaagaggtagaa
gaacttagtgaacctgtgccaggtgacgttggagaaaatgcagtcttctctaaatctgtt
ctacctatgaatcccgtggagatagagattgaaacaccggagcaggctaaaacaagagaa
agaagtgaaaaggtaaaaatggagtttgagacatatcttcggaggatgatgaaacgcttc
actaaagaagttcatgaggacacacacaaggttcaccttctgtgcctgctagcaaatggc
ttctatcgaaatcgcatctgcagccagccagatctgcgtgctattgccctctccatcatc
ccaacccgctttaccaaagtgccacagagagatgtggatgtctgctacctctccaacctg
gtgaaatggtttattggaacatttacggttaatgcagacctttcatacaatgagcaagat
ggtctacagactacattggaaaggagatttgctatttactctgcacgagatgatgaagaa
ttggtccacatatttttactgattctccgggccctggatcttctcacccgactagtgatg
tctctacagccaattcctctgaagttatcagcggcaaagggaaagaaaccttcgaagcag
agatccatagagggtcctggaagctcctcagaaactcccagccatgttccagaaaaccat
accaagccaaaggccagcaaaggaactaaacaagaagaaaccttttccaaggacactggc
aatccaggtgccaaagggaagagaggcaaggcagctacaggcaggaagaaacagagagca
ccttcctccagtgaggaaacgggcaagggagaggagcagcaggagaaccagagaaagcgg
cgtgggcgggagcggcacatgacctcccgggtgtcttataaagaggagagtgggagtgac
aaggccaacagcgactctgactttgagctctccagtggggaagcccattctccatctgat
gaggattctgaccctgactttctgaggcagaagcgggctccagctcctaagaggacaaag
gcagggtccaagagtgactcccagacctcgcgtcaaagctgccctaatccagcagcatcc
tcaagctcttcgagcaacaagagaggcaagaaaattcccagtggtgttgaggaggtagaa
ggagggaaagcagctggtgtcgaccagtggctagaggtgttctgtgacaaggaagaaaag
tgggtgtgtgtagactgtgtgcacagtgtggtgggcgagcctctgacctgttacagatat
gccaccaagcctgtgacctatgtcgtgggcattgacagcgatggttgggtgcgggatgtc
acacaaaggtacgacccagcctggatgacaatgacccgcaagtgccgggttgatgccaag
tggtgggctgaaaccttgaggccataccagagcccgtttgtggatagagaaaagaaggaa
gagttggagtttcagacaaaacacctggaccagcctttgcccactgccattggcacatat
aagaaccaccctctttacgccctgaagaggcatctcctgaaataccaggccatctaccct
gagacagctgcgatccttgggtactgtcgtggagaagctgtctactccagggactgtgtg
cacaccctgcactctaaggacacgtggctgaaacaagcaagagtggtgaggctgggagaa
gtgccctacaagatggtgaaaggctattccaaccgggcccggaaagcccgtctggctgag
ccccagctgcaggattacaatgacctgcccctgtttggccgctggcagacagaggagttc
cagccgccggtggctgtggacggaaaggtgccccggaatgagtttggaaatgtttacctc
ttcctgcccagcatgatgcctgtcggctgtgtccagctaaacctgcccaatctgcaccgc
gtggcccgcaagctggacattgactgtgtgcaggccatcactggctttgacttccatgga
ggctattcccaccctgtaactgacgggtacatcatctgtgaggaatacaaagaagtactc
ctagatgcctgggaaaaggaacaggcactcatcgaaaagaaggagaaagagaaaaaggag
aaacgggctctagggaactggaagctgctggccaaaggactgctcatcagagagcggctg
aagcttcgctatggggccaagagtgaggcgtctctccacaccgatgcaggaggtgggctc
tcttctgacgaagaggaggggaccagctcccaagcagaagcggccaggatcttggctgcc
tcttggccccaaaaccgagaaactgaagaccagacgcagaagcgttctaagaagaccaga
aggggaaagaaagaagcggcttcccatctatttccgtttgagaagctgtga
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