Trichechus manatus latirostris (Florida manatee): 101341267
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Entry
101341267 CDS
T05135
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03008
Ribosome biogenesis in eukaryotes
tmu05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101341267
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101341267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101341267
03009 Ribosome biogenesis [BR:
tmu03009
]
101341267
03036 Chromosome and associated proteins [BR:
tmu03036
]
101341267
Enzymes [BR:
tmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
101341267
Messenger RNA biogenesis [BR:
tmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
101341267
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
90S particles
RNase
101341267
Prokaryotic type
rRNA processing factors
101341267
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
101341267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Glyphos_transf
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
101341267
NCBI-ProteinID:
XP_004385276
UniProt:
A0A2Y9E181
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPS
TTFSNSPAPNFLPPRPDFVPFPPPIPPSAQGPIPPCPIRPPFANHQMRHPFPVPPCFPPM
PPPMPCPNNPPVPGAPPGQSTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
NFNSFQNNTSSFPPSASNSNSPHFRHLPPYPLTKTPSERRSPERLKHYDDHRHRDHSHGR
GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRS
PSLERPYKKEYKRSGRSYGLPVVLDPGCTPELPGEITKNTDSLAPPLETMNHRSSSREKK
RTRWEDEKDKWSDSQSSGKEKTYTSIKEKEPEETLPDKNEEEEEELLKPVWIRCTHSENY
YSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESSS
ESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAK
ARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYIF
EGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVRGLELFSLFLFRDILELYD
WNLKGPLFEDNPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIAN
MLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQ
LSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVE
LSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPS
HHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSR
INHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRF
MLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLNY
PLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLG
HNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAI
TNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDP
KSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAE
MGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDVKK
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggcaatacatgccatagaatgtcattccacccaggacgggggtgtccccga
gggcgaggaggacatggagccagaccctcagcaccagccttcagaccgcaaaatctgaga
ctgcttcaccctcagcagcctcctgtgcaatatcaatatgagccaccaagtgctccttcc
accactttctcaaactctccagcccccaatttcctgcctccacgcccagactttgtaccc
ttccctccacctattcctccgtcagcacaaggccctattcccccctgtccgatcagaccc
cctttcgccaaccaccaaatgaggcaccctttccctgtacctccctgctttcctcccatg
ccacccccgatgccctgtcccaataacccccccgtccctggagcacctcccggacaaagc
actttccccttcatgatgccccctccttccatgcctcaccccccaccccctccagtcatg
ccacagcaggttaattatcagtaccctccaggatactcgcatcacaatttcccacctccc
aatttcaatagtttccagaacaacaccagttctttcccccccagtgctagtaacagcaat
agccctcattttaggcatctccctccatacccactgacaaagacccccagtgagagaagg
tctccagaaaggctcaagcactacgacgatcacaggcaccgcgatcacagtcacgggcgt
ggcgagaggcatcggtccctggatcggcgggagcgaggccgcagtcctgacaggagaaga
caagacagccgctacagatctgattacgaccgaggaagaacaccctctcgccaccgaagc
tatgagcggagcagagagcgggaacgggagagacacaggcatcgggacagccgaagatca
ccatctttggaaaggccctacaaaaaagagtataagagatctggaaggagttatggttta
ccagttgttcttgaccctggatgcacaccagaattacctggggagattactaaaaataca
gattctttggccccacccctggagactatgaatcatcgttcctcaagtagggagaagaag
agaactcgttgggaggatgaaaaagacaaatggagtgacagccagagctcgggcaaagag
aagacctatacctccatcaaggagaaggagccggaggagacactgcctgacaaaaatgag
gaggaggaggaagaacttcttaaacccgtgtggattcgatgtacccattcagaaaactac
tactccagcgaccccatggatcaggtgggagattctactgtagttggaacaagtaggctc
cgggacttatatgacaagtttgaagaagagttggggagcaggcaggaaaaggccaaagca
gccagaccaccatgggagcctcccaagacgaagctggatgaagatttggagagttccagt
gaatccgaatgtgagtcggatgaggatagcacctgttctagcagctcagactctgaagtt
tttgacgtcattgcagaaatcaaacgcaaaaaggcccatcctgaccgactccacgatgaa
ctttggtacaacgacccaggccagatgaatgatggaccactctgcaagtgcagtgccaaa
gcccgacgcacaggaattaggcacagcatttatcctggagaagaggctatcaaaccctgt
cgtcctatgaccaacaatgccggaagacttttccactatcgaattacagtctcccctcct
acaaactttttaactgacaggccgactgttatagagtatgatgatcacgagtatatcttt
gaagggttttctatgtttgcacatgctcccctgactaatattccactgtgtaaagtaatt
agattcaacatagactacacaattcatttcattgaagagatgatgcctgagaatttttgt
gtgagaggacttgagctcttttcattgtttctattcagagatattttggaattgtatgac
tggaatcttaaaggtcctttgtttgaagacaaccctccctgctgcccaagatttcatttc
atgccacgttttgtaagatttcttccagatggaggcaaggaggtgctgtccatgcaccag
attcttctgtatctgctgcggtgcagcaaagccctggtccctgaggaggagattgccaac
atgcttcaatgggaagagcttgagtggcaaaaatacgcagaggaatgcaaaggcatgatt
gttaccaaccccggaacgaaaccaagctctgtccgcattgatcaactggatcgtgaacag
ttcaaccctgatgtgattacttttccgattatcgttcactttgggatacgccctgcacag
ttgagttatgcaggagacccacagtatcagaagctgtggaagagttatgtgaagcttcgg
cacctcctagcaaatagtcccaaagttaaacaaactgacaaacagaagctggcccagagg
gaggaagcactccaaaaaatacggcagaagaatacaatgaggagagaagtaacagtggag
ctaagtagccaaggattctggaaaactggcatccgttctgatgtctgtcagcacgcaatg
atgctgcctgttttgacccatcatatccgctaccatcagtgcctaatgcatctggacaag
ttgataggatatactttccaagatcgttgtctgttacagctggccatgactcacccgagt
catcacttaaattttgggatgaatcctgatcatgccaggaattctttgtctaactgtggg
attcggcagcccaaatacggagacagaaaagttcatcacatgcacatgcggaaaaaagga
attaacaccttaataaatattatgtcacgccttggccaagatgacccaactccttcaagg
attaaccacaacgaacgattggagttcctgggtgatgctgttgttgaatttctgaccagc
gtccatttgtactatttgtttcctagtctggaggaaggaggactagcgacctatcggact
gccatcgttcagaatcaacaccttgccatgctagcaaagaaacttgaactggaccgattt
atgctttatgctcatggacctgacctttgtagagaatcagaccttcgacatgcaatggct
aattgttttgaagccttgataggagctgtttacttggagggaagcctggaggaagccaaa
cagttatttggacgcttactctttaatgatccggacctgcgagaagtatggctcaattac
cctctccacccactccaactacaagagccaaatactgatcgacagcttattgagacttcc
ccagttctacagaaacttactgagtttgaagaagcaattggagtaatttttactcatgtt
cgacttctggcacgagcattcacattgagaactgtgggatttaaccatctgaccctaggc
cacaatcagaggatggaattcctaggtgactccataatgcaacttgtcgctacagagtac
ttgttcattcatttcccagatcaccatgaggggcacttaactttgttgcgaagctctttg
gtgaataacagaacccaagccaaggtagcggaggagcttggcatgcaggaatacgccata
accaatgacaaaacgaagaggcctgtggccctcaggaccaagaccttggcggaccttttg
gaatcatttattgcagcgctatacattgataaggatttggagtatgttcatactttcatg
aatgtctgcttctttccacgattaaaagagttcattttgaatcaggattggaatgacccc
aaatcccagcttcagcagtgttgcttgacacttaggacagaaggaaaagagccagacatt
cctctgtacaagactctgcagacagtggggccatcccatgccagaacctacactgtggct
gtttatttcaagggagaaagaataggctgtgggaaaggaccaagtattcagcaagcggag
atgggagcagcaatggatgcgcttgaaaaatataactttccccagatggcccatcagaag
cggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgggaaagagaacat
caagagagagaaccagatgagactgaagacgtaaagaaataa
DBGET
integrated database retrieval system
