Trichechus manatus latirostris (Florida manatee): 101341476
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Entry
101341476 CDS
T05135
Name
(RefSeq) exosome complex component RRP4 isoform X2
KO
K03679
exosome complex component RRP4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101341476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101341476
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101341476
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101341476
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
101341476
NCBI-ProteinID:
XP_004375819
UniProt:
A0A2Y9DJJ5
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MVATSQHGRQPVTSHWRFLRGPALLRPCERRPGIAGPEIVAPGMVASAQVIGAKMAMEMR
LPVARKPFSESLGRETKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSVERVNKL
ICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAE
DELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVKRQKTHF
HDLPCGASVILGNNGFIWIYPTPEHKEEEAGGFTANLEPVSLADREVISRLRNCIVSMVT
QRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRLLEQEG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggttgccactagtcaacatggccgccagcccgtgacctcccattggcggtttctcaga
ggccctgccctgctccgcccctgcgagcgtcggcctggaatagcggggccggaaatcgtg
gctccgggcatggttgcgtctgcgcaagtcattggcgccaagatggcgatggagatgaga
cttccagttgctcgcaaaccgtttagcgagagcctgggtcgcgagactaaaaaacacctg
gtggtgccgggggacacgatcactacagacacgggcttcatgcggggccatggaacgtat
atgggggaagaaaagctcatagcatctgtggctggctctgtggagagagtaaacaagttg
atttgtgtgaaagctttgaaaaccagatataatggtgaagtaggagacattgtagtgggg
agaatcacagaggttcaacagaagagatggaaggtggagaccaactccaggctggattca
gtcttgcttctctcatccatgaaccttcctggaggagagctgaggagaagatctgcagaa
gatgagcttgcaatgagaggtttcttgcaggaaggggaccttatcagtgctgaggtccag
gcagtgttctctgatggagctgtttctcttcacacgaggagcctaaaatatggaaaacta
ggccagggtgttttggtccaggtttccccctccctggtaaaacggcagaaaactcacttc
catgacttgccatgtggtgcctcagtgattctgggtaacaatggcttcatctggatctac
ccaacacccgagcacaaagaagaggaggcagggggcttcactgcaaacctggaacctgta
tctcttgctgatcgagaggtgatatcccggcttcggaactgcattgtctcaatggtaact
cagaggatgatgctgtatgataccagtatcctgtactgctatgaagcgtcccttccacat
cagatcaaagatatcttaaagccagagataatggaagaaattgtgatggaaacgcgccag
aggctgttagaacaggaaggataa
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integrated database retrieval system
