Trichechus manatus latirostris (Florida manatee): 101341487
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Entry
101341487 CDS
T05135
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03030
DNA replication
tmu03410
Base excision repair
tmu03420
Nucleotide excision repair
tmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101341487
03410 Base excision repair
101341487
03420 Nucleotide excision repair
101341487
03430 Mismatch repair
101341487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmu03032
]
101341487
03036 Chromosome and associated proteins [BR:
tmu03036
]
101341487
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101341487
DNA replication proteins [BR:
tmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101341487
DNA Replication Termination Factors
ELG1-RFC complex
101341487
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101341487
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101341487
Check point factors
HRAD17(Rad24)-RFC complex
101341487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
nSTAND3
TIP49
AAA_7
TniB
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
AAA_3
AAA_28
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101341487
NCBI-ProteinID:
XP_004379093
UniProt:
A0A2Y9DQF8
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
METSVLKQQQQQPAAATSRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLY
GPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGF
KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTP
ELMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCT
GHPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRI
HLLIKMADIEYRLSLGTSEKIQLSSLIAAFQVTRDLIVAQA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagtgctcaagcagcagcaacaacagcctgcggcggccacgagcaggaac
ctgccctgggttgaaaagtaccggccacagacactaaatgatctcatttctcatcaggac
attttgagtaccattcaaaaatttatcagtgaggaccgactgccacacctgcttctctat
ggtcctcccggaacagggaagacgtccaccatcctggcctgtgctaaacagctctacaaa
gataaagaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagat
attgttcggggaccaatcctcagctttgctagcacaaggacaatatttaagaaaggcttt
aagctagtgatcttggatgaagctgatgccatgactcaagacgcccagaatgccctgagg
agagtgattgagaagtttactgagaataccagattttgcctcatctgtaactacctgtcg
aagatcatccccgccttgcagtcacggtgtacgaggttccgattcggtcccctgactcct
gaactgatggtcccacgtttggaacatgtcgtggaagaagagaaagttgatataagtgaa
gacggaatgaaagcacttgtaactctttccagtggagatatgagaagggctctgaacatt
ttgcagagcaccaatatggcctttgggaaggtgacagaggagactgtctacacctgcacg
gggcacccgctcaagtcagacatcgccaacatcctggactggatgttgaatcaagacttc
accacagcctacaggaatatcatggagttgaaaacactgaaggggttggcattgcatgac
atcctgacagagatacacttgtttgtgcacagagttgactttccgtcttcagttcgaata
catttgttgatcaaaatggcagacatcgagtacagactttctcttggtaccagtgagaag
attcagctgagttcccttattgctgcttttcaagtcaccagagacctgatcgttgcacag
gcctag
DBGET
integrated database retrieval system
