Trichechus manatus latirostris (Florida manatee): 101341851
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Entry
101341851 CDS
T05135
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04140
Autophagy - animal
tmu04148
Efferocytosis
tmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101341851
04148 Efferocytosis
101341851
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101341851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101341851
Membrane trafficking [BR:
tmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101341851
Hops complex
101341851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
101341851
NCBI-ProteinID:
XP_004383067
UniProt:
A0A2Y9DYZ3
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWQKEKAA
SVRPVLEIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCQERAAQILVAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GHIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAIVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSSHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDSFVR
MCQDLRVLNAVRDYHIGIPLTYSQYKQMTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQMAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIERRNEAELSLVLSHCTGAADGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccgctcggggactctgccttttaccggaaatat
gagctgtacagcatggattgggacctgaaggaggaactccgggactgtctggtggccgct
gcaccctatgggggcccgattgcgctgctgaggaatccctggcagaaagagaaggctgcc
agtgtgcggccagtgctggagatctactcggcttctggtatgcctctggccagtctgctg
tggaagagcgggcccgtggtgtccttgggctggtcagctgaggaggagctgctctgtgtg
caggaagacggtgcagtgctggtttatgggcttcatggtgactttcggagacacttcagc
atgggcaatgaagtgctccagaaccgggttctggatgcccggatctttcacacggagttt
ggttccggggtggccatcctcacaggagcccaccgcttcaccctcagtgccaatgtaggc
gacctcaagctccgccggatgccagaggtgccaggcctgcagagtgcgccctcgtgctgg
actacactgtgccaggagcgagcagctcaaattcttgtggccgtgggccctgatctttac
ctcctggaccacgccgcctgctctgcagtgacgccccctggcctggccccaggagtgagc
agctttctgcagatggccgtctccttcacctaccggcacctggcactcttcacagacacg
ggtcacatctggatgggcacagcgtcactcaaggagaagctgtgtgagttcaactgcaac
atccgggcccccccaaagcagatggtctggtgcagccgtcctcgcagcaaggagagagcc
atcgtggtggcctgggaaaggcggctaatggtggtgggtgatgcgcctgagagcatccag
tttgtgctggacgaggactcatacctggtgcctgagcttgatggagtccgcatcttctca
cgcagcagccatgagttcctgcatgaggttccagtggccagtgaggagatctttaaaatt
gcctcaatggcccccggagcgctgctgttggaggcccagaaggagtatgagaaagagagc
cagaaggcagacgagtaccttcgggagatccaggagctggggcagctgacccaggctgtg
cagcagtgcattgaggccgcgggacatgagcactggccagacatgcagaagagcctgctc
agggcggcctcctttggaaagtgtttcctcgacagatttccacctgacagcttcgtgcgc
atgtgtcaggacctgcgtgtactcaatgctgttcgggactatcacattggcatccccctt
acctatagccaatataagcagatgaccatccaggtgctgctggacaggcttgtgttgcgg
aggctttatcccttggccatccagatatgtgagtacctgcgtcttcctgaagtgcagggc
gtcagcaggatcctggctcactgggcctgctacaaggtgcaacagaaagacgtgtctgac
gaggatgttgctcgggctattaaccagaaacttggggacacacctggtgtctcctactct
gacattgctgcacgggcctatggctgtgggcgcacggagctggctattaagttgctggag
tatgagccacgctcgggggagcaggtaccccttctcctaaagatgaaaaggagcaaactg
gcgctgagcaaggccatcgagagtggggacaccgacctggtgttcacggtgttgctgcac
ctgaagaacgaattgaaccgaggcgatttcttcatgacccttcggaaccaacccatggcc
ctgagtttgtaccgacagttctgtaagcaccaggaactagagacgctgaaggacctttac
aatcaggatgacaatcaccaggagctgggcagcttccacatccgagccagctacgctgct
gaggagcgtattgaggggcgagtagcagctttgcagatggcagctgacgccttctacaag
gccaagaatgagtttgcagccaaggccacagaagatcagatgcggctcctgcggctacag
cggcgcctggaagacgagctggggggtcagttcctagacctgtctctacacgacacggtc
accaccctcatccttggtggccacaacaagcgtgcagagcagctggcacgtgatttccgt
atcccagataagaggctttggtggctaaagctgacagccctggcggatctggaagactgg
gaggaactggagaagttttctaagagcaagaaatcacccatcggctacctgccctttgtg
gagatctgcatgaagcaacacaacaaatacgaggccaagaagtacgcttctcgcgtgggt
cccgagcagaaagtcaaggccttacttctcgttggggatgtggctcaggccgcagatgtg
gccatcgagcgccgaaacgaggctgagctgagcctcgtattgtctcactgcactggagcc
gcagatggggccaccgctgacaagattcaacgggccagggcacaagctcagaagaagtga
DBGET
integrated database retrieval system
