Trichechus manatus latirostris (Florida manatee): 101342039
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Entry
101342039 CDS
T05135
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101342039
Spliceosome [BR:
tmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101342039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
101342039
NCBI-ProteinID:
XP_004387935
UniProt:
A0A2Y9E639
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MQNSHMDEYKNSSNGSTGNSSEVAVEHSADFSTEIMNVTEMEQSPDGSPNVNATTEENEM
ANAVDLPVTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGVEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSTEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgaatacaaaaattctagtaatggcagcacaggcaacagt
tcagaggtagcagtagaacattctgctgatttcagtactgagattatgaatgttacagaa
atggaacaatcacctgatggctctcccaatgtgaatgcaactacagaagaaaatgaaatg
gcaaatgctgtggacctcccagtgacagaaactgaagcaaatttccctccagaatatgaa
aaattttggaaaactgtagaaaataatcctcaagattttacaggctgggtatatttgctt
cagtatgtggaacaggagaatcacttgatggctgccaggaaagcatttgacaaatttttc
atacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcgacat
gacaacattaaacaatcagatgaggtttatcgtcgggggcttcaggcaatacctcttagt
gttgacctttggatacattatataaacttcttaaaagaaacattggaccctggcgatcct
gagacaaacagtacaataagaggaacttttgagcatgctgttctagctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatataaactgggaaaatgaacaaggaaaccta
agagaagttacagctatatatgatcgtattcttggtattccaacacagctatatagtcat
cattttcagagatttaaagaacatgtacagaataatttacctagagatcttttaactggt
gagcagtttattcagctgcgaagggaattagcttctgtaaatggacatagtggtgatgat
ggtcctcctggtgatgatctaccatcgggagttgaagatataactgatccagcaaagctt
attactgaaatagaaaacatgagacacagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagcaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaagccattggaaaaggcacagctgaaaaactggaaagaatatttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctttttgaaagatgtgtcatatca
tgtgccctctatgaggagttctggattaagtatgcaaagtacatggagaaccacagtact
gaaggagtgaggcatgtcttcagcagagcttgtactattcatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggagcagcagggtaatattaacgaagccaggaat
atcttgagaacatttgaagaatgtgttttaggattggcaatggttcgtttaagaagagta
agtttagaacgacggcatggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccaaatcaaataacgaatcatcgttttatgctatcaaactggcccgacatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaattgaaaga
gacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaacatcctaaattgttttgacaaagctatacatggttcattgcct
attaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttctgaatgcttatgacgaacatcaaacactcctaaaagaacaggat
tctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagcacataca
gaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaatcaagct
gcatataattacagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattaccctcctcctccaacctga
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