Trichechus manatus latirostris (Florida manatee): 101342056
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Entry
101342056 CDS
T05135
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04360
Axon guidance
tmu04514
Cell adhesion molecule (CAM) interaction
tmu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101342056
04517 IgSF CAM signaling
101342056
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101342056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101342056
04090 CD molecules [BR:
tmu04090
]
101342056
04091 Lectins [BR:
tmu04091
]
101342056
Cell adhesion molecules [BR:
tmu04515
]
Immunoglobulin superfamily
L1 family
101342056
CD molecules [BR:
tmu04090
]
Proteins
101342056
Lectins [BR:
tmu04091
]
I-type lectins (Siglecs)
101342056
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Fn3_ROS1
Ig_C17orf99
Fn3_VIN3
BiPBP_C
Ig_PDGFR_d4
Fndc10
Ig_VSIG10L2_N
Motif
Other DBs
NCBI-GeneID:
101342056
NCBI-ProteinID:
XP_004390630
UniProt:
A0A2Y9EBC1
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MAVALRYVWPLLLCSPCLLIQIPEEYEGHHVMEPPVITEQSPRRLVVFPTDDISLKCEAS
GKPEVQFRWTWDGVHFKPEEEPGVTVHQAAHSGSFTLTGNNSNFAQRFQGTYRCFASNRL
GTAMSHEIQLVAEGAPKWPKETVKPVEVEEGEPVVLPCHPPLSAEPPRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTTDNHSDYICHAHFLGARTIIQKEPIDLRVKATNSMIDRKP
RLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNYNKTLQLV
NVGEEDDGEYRCLAENPLGTARHAYYVTVEAAPYWLHKPQSQLYGPGETARLDCQVQGRP
QPEVTWRINGIPLKELSEDQKYWINPENALILSNVQPSDTMVTQCEAHNRHGLLLANAYI
HVVQLPTKILTPDNQTYLAVEGSTAYLLCKAFGAPVPSIQWLDEEGATVLQDERFFPYAN
GTLGIRDLQANDTARYFCQAANDQNNVTIVANLQVKDATQITQGPRSAIEKKGSRVTFTC
QASFDPSLKHSITWRRDGRDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTKLDA
VESRAQLLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMEP
EKWYSLGKVPGNQTSTTLKLSPYIHYTFRVTAINKYGPGEPSPASETVVTPEAAPEKNPV
DVRGEGNETNNMVITWKPLKWMDWNAPQVQYRVQWRPQGARGAAWQEQILSEPFLVVTNT
STFVPYEIKVQAVNSQGKGPEPHVTVGYSGEDFPQASPQLDGVEILNSSAVLVKWWPVDP
AQVKGHLRGYNVTYWWEGSQRKHSKRHVHRGHVVVPANTTSAILSGLRPYSSYHLEVQAF
NGRGAGPASEITFSTPEGVPGHPEALHLECQSDTSLLLRWQPPLSHNGVLTGYILSYHPL
DEGGKEQLSFDLRDPELRTHNLTNLDPHLRYRFQLQATTKKGPGEAIVREGGTMALSGVP
DFGNLSATAGENYSIVSWVPREGQCNFGFHIRFKALGEEKVDYLPSQYVSYNQSSYTQWG
LQPDTDYEIHLLKEKMLLHQVAVKTNGTGRVRLPPAGFATEGWFIGFVSAIILLLLILLI
LCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDI
KPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPTVTLE
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcgctgcggtacgtgtggcctcttctcctgtgcagcccctgcttgctcatc
cagatccccgaagaatatgagggacaccacgtgatggagccacccgttatcacggagcag
tctccccggcgcctggttgtcttccccaccgatgacatcagcctcaagtgcgaggccagt
ggcaaacccgaagtgcagttccgctggacatgggatggtgtccacttcaaacccgaggag
gagccgggcgtgaccgtgcaccaggcggcccactcgggctccttcaccttgaccggcaac
aacagcaactttgcccagagattccagggcacctaccgctgctttgccagcaacaggctg
ggcaccgccatgtcccatgagatccagctcgtggctgagggtgcccccaagtggccaaag
gagacggtgaagccggtggaggtggaggaaggggagccggtggtgctaccttgccaccca
cccctcagcgccgagccccctcgcatctactggatgaacagcaagatcctgcacatcaag
caggatgagcgcgtgacgatgggccagaacgggaacctctactttgcgaacgtgctcacc
acggacaaccactcggactacatctgccatgcccacttcctgggcgcccgtaccatcatc
cagaaggaacccattgacctccgggtcaaggccaccaacagcatgattgacaggaagccg
cgcctgctcttccctaccaactccagcagccacctggtggccttgcagggacagcctctg
gtcctggagtgcattgctgaggggttccccacacccaccatcaagtggctgcgcccaagt
ggccccatgccagccgaccgcgtcacttaccagaactacaacaagacgctgcagctggtg
aacgtgggcgaggaggacgatggcgagtaccgctgcctggctgagaacccgctgggcact
gcccggcatgcctactatgtcactgtggaggctgccccatactggctgcacaaaccccag
agccaactgtacgggccgggagagacggcgcgcctcgactgccaggtccagggccggccc
cagcccgaggtcacctggagaatcaacggaatccctttgaaggagctgagcgaggaccag
aagtactggatcaatccagaaaacgccttgatcctgagcaacgtgcagccgagcgacacg
atggtgacccagtgcgaggcccacaaccggcacgggctcctgctggccaacgcctacatc
cacgttgtccagctgcccaccaagatcttgactccagacaaccagacgtacctggctgtc
gagggtagcacagcctaccttctgtgcaaggccttcggggcccccgtgcccagcatccag
tggctagacgaggaaggggcaacagtacttcaggacgagcgcttcttcccctatgccaac
gggaccctgggcatccgggacctccaggccaatgacaccgcacgctacttctgccaggct
gccaatgaccaaaacaatgtgaccatcgtggctaacctgcaggtcaaagatgccactcag
atcacgcaggggcctcggagtgcaatcgagaagaagggttcaagggtgacgttcacctgc
caggcttcctttgacccctccttgaagcacagcatcacctggcgcagggatggccgtgac
ctccaggagcttggagacagtgacaagtacttcatcgaggacggccgcctggtcatccac
agcctggactacagtgaccagggcaactacagctgtgtggccagcaccaagctggacgcg
gtggagagcagggcccagctgctggtggtggggagccccgggccagtgccccagctggag
ctgtccgaccaccacctgttgaagcagagccaggtgcgcctgtcctggagccccgccgag
gaccacaatgcccccattgagaaatatgacattgaatttgaagataaggaaatggagccg
gagaaatggtacagcctgggcaaggtgccagggaaccagacctctaccaccctcaagctg
tcgccctacatccactacacctttcgggtcactgccatcaacaagtatggccctggggag
cccagcccagcctccgagaccgtggtaacacctgaggcagccccagagaagaacccggtg
gatgtcaggggggaagggaatgagaccaacaacatggtcatcacgtggaagccgctcaag
tggatggactggaatgccccccaggttcagtaccgggtgcagtggcgccctcagggggca
cggggagcggcctggcaggagcagattttgagcgagccgttcctggtggtgaccaacacg
tctaccttcgtgccctatgagatcaaagtccaggctgtcaacagccagggcaagggccct
gagccccacgtcaccgttggctactctggggaggacttcccccaggccagcccccagcta
gacggtgtcgagatcctcaactcgagtgctgtgctggtcaagtggtggcctgtggaccca
gcccaggtcaagggccacctccggggatacaacgtgacgtactggtgggagggcagccag
aggaagcacagcaagagacatgtacacagaggccacgtggtggtgcctgccaacaccacc
agcgccatcctcagtggcctgcggccttacagctcgtaccacctggaggtgcaggccttc
aacggacggggcgcggggcctgccagcgagatcaccttcagcaccccggagggagtgccc
ggccaccctgaggcgctgcacctggagtgccagtcggacaccagcctgctgctgcgctgg
cagcctccgctcagccacaacggcgtgctcaccggctacatcctctcctaccaccccttg
gacgagggcggcaaagaacagctgtcctttgacctccgcgacccggagcttcggacgcac
aacctgaccaacctcgacccccaccttcggtaccgcttccagctgcaggccaccacgaag
aagggcccaggcgaggccatcgtgcgggaaggaggcaccatggccttgtccggggtcccg
gattttggcaacctgtcagccacagcaggcgaaaactacagcatcgtctcctgggtccct
agagagggccagtgcaacttcgggttccacatccggttcaaggccctcggtgaggagaag
gtggactacctcccgtcacagtacgtcagctacaaccagagctcctacacgcagtggggc
ctgcagccagacaccgactacgagatccacctgctcaaggagaagatgcttctgcaccag
gtggccgtgaagaccaacggcaccggacgggtgaggctgcctccggccggcttcgccacc
gaaggctggttcattggcttcgtcagcgccatcatcctcctgctcctcattctgctcatc
ctctgcttcatcaagcgcagcaagggtggcaagtactcagtgaaggacaaggaggacacc
caggtggactcagaggcccggccgatgaaagatgagaccttcggcgagtacaggtccctg
gagagtgacaacgaggagaaggcctttggcagcagccagccatccctcaatggggacatc
aagcccttaggcagtgacgacagcctggccgattacgggggcagtgtggacgtccagttc
aatgaagacggctctttcatcggccagtacagcggcaagaaggagaaggaggcagcgggt
ggcaatgacagctctggggccacctcccccatcaaccccacagtgaccctggagtag
DBGET
integrated database retrieval system
