Trichechus manatus latirostris (Florida manatee): 101342486
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Entry
101342486 CDS
T05135
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04110
Cell cycle
tmu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101342486
04114 Oocyte meiosis
101342486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
101342486
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tmu00535
]
101342486
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101342486
Meiosis-specific proteins
Cohesin complex and associated proteins
101342486
Proteoglycans [BR:
tmu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101342486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
101342486
NCBI-ProteinID:
XP_004374898
UniProt:
A0A2Y9DHS0
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattatccagggttttcgaagttacagagatcaaacaattgta
gatcccttcagttcaaaacataatgttattgtgggcagaaacggatctggaaaaagtaac
tttttttatgcaattcagtttgttctcagcgatgagtttagtcatcttcgtccggaacag
cgattggctttgttgcacgaaggtactggtcctcgtgttatttctgcttttgtggagatt
atttttgacaattcagacaaccgattaccaattgataaagaggaagtttcacttcggaga
gtaattggtgccaaaaaggatcagtatttcttagacaagaaaatggtcacgaaaaatgat
gtgatgaacctccttgaaagtgctggtttttctcgaagcaatccttactatattgttaaa
caaggaaagatcaaccagatggcaacagcaccagattctcagagactaaagctattaaga
gaagttgctggtactagagtatatgatgagcgaaaagaagaaagcatctccttaatgaaa
gaaacagagggcaagagggaaaaaatcaatgaattgttaaaatacattgaagagagatta
cataccttagaggaagaaaaggaagaactagctcagtatcagaagtgggataaaatgaga
cgagccctggaatataccatttacaatcaggaacttaacgagacccgcgctaaacttgat
gagctttctgctaagcgagagactagtggagaaaaatccaggcaattaagagatgcccag
caggatgccagagataaaatggaggatattgaacgccaagttcgagaactgaaaacaaaa
atttcagctatgaaagaagaaaaggaacagctcagtgctgaacgacaggaacaaattaag
cagaggactaagttggagcttaaagccaaggatttgcaagatgaattggcagggaatagt
gagcaaaggaaacgcttattaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagtgtaaaagaaaaagaagagcga
ggcattgctagattggcccaagctacccaggaaagaacagatctttatgcaaaacaaggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaaa
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggacactgaggcaaataaagagaaaaatctggaacagtataataaattggatcaggat
cttaatgaagtcaaagctcgagtagaagaactggacagaaaatactatgaagtaaaaaac
aagaaagatgagttacaaagtgaaagaaattacttgtggagagaggagaatgcagaacag
caagctcttgctgctaaaagagaagatcttgaaaagaagcagcaactgcttagagcagca
acaggaaaggccattttaaatggaatagatagcataaacaaagtgttggaccactttcgt
cggaaaggaataaaccagcatgttcaaaatggctatcacggcattgtgatgaataacttt
gaatgcgagccggctttctacacatgtgtggaagtcactgctggaaacaggttattttat
catattgttgattcagatgaagtcagtacgaagattttaatggaatttaataaaatgaat
cttcctggagaagtaactttcctgcccctcaacaagttggatgtcagggatactgcctat
cctgaaaccaatgatgctattcctatgatcagtaaactgaggtacaatcctagatttgac
aaagctttcaaacatgtgtttggaaaaacacttatttgtcgtagcatggaggtttcaacc
cagctggcccgtgctttcacaatggactgcattactttggaaggtgaccaagtcagtcat
cggggtgctctaactggaggttattatgacacaaggaagtctaggcttgaattacaaaaa
gacgttagaaaagcagaagaagaactaggtgagcttgaagcaaagctcaatgaaaacctg
cgcagaaatattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcaacag
atagagacccagcaaaggaaatttaaagcatcccgagatagtatattatcagaaatgaag
atgctaaaggagaagaggcagcagtcagagaaaacctttatgcctaagcaacgtagcttg
caaagtttggaggcaagtttgcatgcgatggaatctaccagggaatcattaaaagcagaa
ttgggaacagatttgctttctcaacttagtctggaagatcagaagagagtagatgcactg
aatgatgaaattcgtcaacttcagcaggaaaatagacagttgctgaatgaaagaattaaa
ctggaaggtattattactcgagtagagacatatctcaatgagaatctgaggaaacgctta
gaccaagtagaacaggaacttaatgaactgagagagacagaagggggtactgttctcact
gccacaacatcagaacttgaagccatcaataaaagagtaaaagatactatggcacgatcg
gaagatctggacaattccattgataaaacagaagctggaattaaggagcttcagaagagt
atggaacgctggaaaaatatggaaaaagaacacatggatgctataaatcatgatactaaa
gaactggaaaagatgacaaatcgccaaggcatgctactgaagaagaaagaagaatgtatg
aagaaaattcgagaacttggatcacttcctcaggaagcatttgaaaaatatcagacactg
agcctcaaacagttgtttcgaaaacttgaacagtgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagaccagtttgtaaatttctccgagcagaaagaaaagtta
ataaaacggcaagaagagttggatagggggtacaaatcaatcatggaattgatgaatgta
cttgaactccgaaaatatgaggctattcagttaactttcaaacaggtatctaagaacttc
agtgaagtattccagaagttggtacctggtggcaaagctactttggtgatgaagaaagga
gatgtggagggcagtcagtctcaggatgaaggagaagggagtggtgaaagtgagaggggt
tctgggtcacaaagcagtgtcccatcagttgaccagttcactggagttggaattagggtg
tcatttacaggaaaacaaggtgaaatgagagaaatgcaacagctttcaggtggacagaaa
tccttggtagctcttgctctgatatttgcaattcagaaatgtgacccagctcctttttac
ttgtttgatgagattgaccaagctctggatgctcagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgctcaatttattacaactacattcaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagtttagaaacaaagttagtcatattgatgtg
atcacagcagagatggccaaagactttgtagaagacgataccactcatggttaa
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integrated database retrieval system
