Trichechus manatus latirostris (Florida manatee): 101342499
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Entry
101342499 CDS
T05135
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101342499
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
101342499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
DUF4129
Motif
Other DBs
NCBI-GeneID:
101342499
NCBI-ProteinID:
XP_023588279
UniProt:
A0A2Y9R8X8
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MDFPSSLRPTLFMSGPLGLSSVPSLSFMCSWRDALTLPESWSQSAENAAPHLARGLRWEP
ETPGPFPLLPPSPDPWDPGLTAQDLLFRGGHQSCRRPRATLDVTEQLSRFLWDHGDIAFG
PLGNLMQENFKLEGARSRSKKKTVVSVKRLLQDLGGHQPWGCPWAYLSHRQRRFSILGGP
VLGRPVASLLGELLQEELAGRWGQLLLDDAFTGGALAWLPGRTPLAGQLVYPNGGALDRL
CLQEVSLTPDGSPQLLGDPGHIQLRGPVRQVVTRTVQGEALLAVRSDYHCAVWKVSKQGR
PAPLQVLQVEKGATGINLSPHLPGELAVCSRSGAVCLWTPQDGLQQVYKDPETLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKMIDMQGPPGCGLLLFRGGAEASCQKGERVLLTQYLGT
SSPTSLNPTLHLICTQLLPGPQFSLYLVDERLPLVPMLKWAHGLPSAPLLAQLLPASHPG
APRPLLLGGQGGQLQLLHLSGEGASAPRLAGPPQSLPARTDALSGFPLLEPTDQRRLQER
LNAPTIGLAAAIPPSASTPGLALFHLSMAGDVFYQHLRLQEESSFCRDAGLPGDPGPEPQ
APMVAAPAPDRTPTPTTASWTPQATACCNRWLKALLKVPLPPPVWTAPTFSHRHLLSYKE
QQQDEGKVLVGLRAAMAQGRLLRQSDLGLLPTAEPPPAPESGPEDELSERLGEAWEGRGA
AWWERRQGRSLGPGHRPRRHKRRTQLSSTFSSLSGRWDLSDGPSPPPSPDRTCPEPRPLP
PATPPSQELTQELWARGVPVERQQTLRDYMARLPSSGLGATSAPPSQASSIRSTPSRQQA
PRKKSRMGF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctccgccccaccctgtttatgagcggcccccttggtctgagc
agtgtccccagcctgtcctttatgtgtagctggagagatgcgctgaccctgccggagtcc
tggtctcagagtgccgagaatgcggcaccgcacttggccaggggcctgcgatgggagcca
gagacccctgggccctttcccttgctgccccctagtcctgatccctgggaccctgggctg
actgcccaggatctgcttttccgtggtggtcaccagtcctgcagacggccccgagccacg
ctggatgttactgagcagctcagccgcttcctgtgggatcatggggacatcgcctttggg
cccctggggaacctgatgcaggagaatttcaaacttgagggtgcacggagccgctctaag
aagaagacagtggtcagtgtgaagaggctgctccaggacctcggtggacaccagccctgg
gggtgtccctgggcatacctcagccaccggcagcgccggttctccatccttgggggcccg
gtcctgggcaggcccgtggccagcctcctgggggagcttctgcaggaggagttggcagga
cgctgggggcagctgctcctggatgatgccttcactgggggtgccctggcctggctgcct
gggaggacacccctggccgggcagctggtctaccccaacggaggtgccctggacaggctg
tgcctccaagaggttagtttgaccccagatggcagcccccagctcctcggggaccctggc
cacatccagctccgagggcctgtccggcaggtggtgacccgcaccgtccaaggagaagct
ctgctggcggtccgctccgactaccactgtgccgtgtggaaggtcagtaaacaggggcgg
ccagccccgctccaggtgctgcaggtggagaagggagccacagggatcaatctcagccct
caccttcctggggagctagccgtctgcagccgttctggagctgtctgtctgtggaccccc
caggatgggctgcagcaagtctacaaggaccctgagaccctagtgttccgggacccctct
ccctggcgctgggcagatttcactgcccaccctcgggtgctgactgttggtgatcgcact
ggagtgaaaatgatagacatgcagggcccaccgggctgtggtctcctgctttttcgtggg
ggggcagaggcctcgtgccagaaaggggaacgcgttctgctcacccagtacctggggacg
tccagccctacatctctgaatcccaccctccacctcatctgtactcagcttctccctggc
ccgcagttctctctttatctggtggatgagcgcctccctttggtgcccatgctgaagtgg
gcccatggcctgccctctgcgcccctgctggcccagctgctgcctgcgtcccaccctggt
gcccctcggcccctgctcctggggggccagggtggccagctgcagctgctgcatctctca
ggagagggggcctccgcgccccggctggcagggcccccacagtccctcccagcgaggacc
gatgccctctccgggttccctttgctggaacccacagatcagcgacggctgcaggagcgg
ctgaatgcgccaaccataggtctggcggctgccatcccaccctctgcctcaacaccaggc
ctggcgctcttccacctctccatggctggagatgtgttctaccagcacctgcgcctccag
gaggaatccagcttctgcagggatgctgggcttcccggcgaccctggccctgagccccag
gcccccatggtggcagcgcctgccccagacaggacgcccacacccaccacagcttcctgg
accccccaggccactgcctgctgtaaccggtggctgaaggctctgctcaaggtgcccctt
cccccacctgtgtggacggcacccaccttttcccaccgccaccttctgagctacaaggaa
cagcagcaggatgagggtaaagtgctggtaggtctgcgagcagccatggcccagggacgg
ctcctgcggcagagtgacctaggcttgctccccacagctgagccacccccagccccggag
tccggcccggaggacgagctcagtgaacgactgggtgaagcctgggagggccggggggca
gcctggtgggagaggagacagggcaggagcttggggccagggcaccggccaaggcggcac
aagcgccgcactcagctctccagcaccttctcctcgctcagcggccgctgggacctctct
gacggccccagcccccctcctagcccagaccgcacctgccctgagccccggcctctgccc
ccagccacacccccctcccaggagctgacccaggagctgtgggcccggggtgtccctgtg
gagcggcagcagacactccgggattacatggccaggctgccttcttctggccttggggcc
acctccgcacccccctcccaggcctccagcatccggagcaccccctccagacagcaggcc
ccccggaagaagtcccgcatgggcttctga
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