Trichechus manatus latirostris (Florida manatee): 101342570
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Entry
101342570 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein C9orf84 homolog
KO
K28108
shortage in chiasmata 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
101342570
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101342570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
101342570
NCBI-ProteinID:
XP_004372221
UniProt:
A0A2Y9DD84
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MTDTSVLDQWKASLFVEDFLEKKTITGMPTLINCEFEQVVPSSNPNSQIEVEEASLYTHE
HYSEVFALANSLEKYPALQTQDQDLFIDDEEILFVNNLMDYKSHLPTLDTLLSRLKLFLV
KDPLLDFKGQIPTKANFFRECFPFQENLKVNEKKDFSMDKENFCREKLEDTVGXNEIIIL
AFNNFLINCEFLISTSPKQKTDIPSFSELKESLNLMPEIINYVDENEKLFKRDLTTKYTI
DKDIKCSCTEILTFQRPCKPACSEPGRLEMPLTHLHITSQHSSVNSLCTGLQTFPFSPVC
KITLLATEESANKYWMVWQLESCRSVLKPFLLTVQRTQEPNSQYSVTDFKKMFSIEEESL
VISPLRAEWWKQAGPNLKMTETLEHLNTDLCHNYLSSDNTKKEILLPTKLLQLESWLEDK
SCSLPIICINEKSANGHLSFPQRSLSLAKEIPALCFPNKCISIKRPTKEEKPKNDPELDY
RIIQKKENKDHFELDCTVPSIESCSSSRIEKVSFEHGKKRGNNLDLLSDFIMLRNKYKTC
ISKTEVTNSDEKDDKEEHSLTLQDESAIVCTNKTVEKINQERGADNIIEIQASDSQCQAY
CFLEAAATPILKKLVCLCTLSAANWKFATVIFDQSRFLLKEQEKVISDTFHQGTNDEREM
TFKHAALLHLLVTVRDVLLTCSLDTALGYLSNAKDVYKSILGSYLDDIWRQLEIVHFTRK
KNPETNYKIQELQCQILSWMQIQQQIKVLIIIRMDSDGEKHLLIKMLNKIDGLTLTVLYS
NERKGSLKSKGVLNGTCSCVVVHNQYIGADFPWNSFSFVVEYNYAENSCWTKHCEKLNIP
YMAFKTILPDTVLKRSSLLDRFSGFLLEIQIPYVFFASEGLLNTPEILQLLESNYNITLV
ERSCSESLKLFGGIEHYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYTCCW
IILYSRKTLNSEYHLTEETLHHLALIYAALVSFGLKSEELDVKLIIAPGIKETALIIRQI
ADHNLMTSKRDPHEWLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLQWILLAT
LCQLQDLLPEVPEKVLKHFCGITSLFQINSSSVTKSPQISSPQEKRNRTSTFASQNSATS
SSDSVIHEHNESYQYSDLGEAVQEDTNTISNYNSSLMELREMPCILPSVHSFSQTSYWKD
SSCNQNTVQNNPFLISTESRKATCHSFLNQNDSESDVFGLGLTQMNCETRISPTCTHKRV
APNFINYQKKRTHEVKGSINKEVSSPVFSLEGSQSPLHWKNVWEQNHSFNLQYGTCDKWY
SQKDNLFTNQQKCLSDELEDFIYESSNAGTKKTFWKELPSAPSLDLFCSSNSNVNQKKFD
SLYFCQRAGKCLGQKRYLESSSNAGDKESLTGFMYSQLPQFKKRRLVYEKVPGRPDGQTR
LRFF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacttcagtcttggatcaatggaaagcaagtctctttgtggaggatttcctt
gagaagaaaacaattacaggaatgccgaccctgattaactgtgaatttgaacaagttgtt
ccaagttcaaacccaaattcccaaattgaagtagaggaagccagtttatatacccatgaa
cactacagtgaagtttttgcacttgccaactctttagaaaagtatccagcacttcaaaca
caggatcaagatttgtttattgatgatgaagaaatactttttgtaaataatttgatggac
tataaaagtcatttaccaactttggatactctcttgagtaggctaaaactgtttttggta
aaggatccccttttagatttcaaaggacagatccccacaaaagctaattttttcagggaa
tgcttcccttttcaagagaatttgaaagttaatgagaaaaaagatttttccatggataaa
gagaacttttgtcgggagaaactagaggatacagtaggttaaaatgaaattataatactt
gctttcaataattttcttataaattgtgaattcttaatatctacaagtcccaaacaaaag
actgatattccatcattctcagaactaaaggagtcattaaacttaatgccagaaataata
aattatgtagatgaaaatgaaaagcttttcaaaagagatcttactaccaagtatacaatt
gacaaggatataaaatgcagctgcacagagattctgacatttcaaagaccatgcaaacca
gcttgtagtgaaccaggaaggttagaaatgccattaactcatctacacataacaagccaa
cattcttcagtgaattcattatgtacagggcttcagacatttccattttctcctgtttgt
aaaatcactttgcttgccactgaagaatcagctaataaatactggatggtatggcaatta
gaaagctgcagaagtgttttgaaaccatttttgcttacagtacaaagaactcaagagccc
aacagtcagtattcagttacagattttaaaaagatgttttccattgaagaagaaagcctt
gtgattagtcctttaagggcagagtggtggaaacaagcaggaccaaatctgaaaatgaca
gaaactttggaacatctaaatacagatttgtgtcacaattatctatcttctgacaatact
aaaaaggagatacttttgcctacaaagttgcttcaattagaatcatggctagaagataaa
agttgttctttacctattatatgtattaatgagaagtctgcaaatggtcatttatcattt
ccacaaaggagtttatctctggcaaaagaaataccagctctgtgttttcctaataaatgt
atctctattaaaagaccaacaaaagaagaaaaaccaaagaatgatccagagctagattac
agaataatccaaaagaaagaaaataaagatcactttgaacttgattgcacagtaccatct
attgaatcatgctcttcttcaagaattgaaaaagtatcttttgaacatggtaaaaaacga
gggaataatttggaccttttgagtgactttattatgctgcgaaataaatataagacttgc
atctcaaagacagaagttacaaatagtgatgaaaaagatgataaagaggaacattctctg
actcttcaagatgaaagtgctattgtctgtactaataaaaccgtagagaaaataaatcaa
gaaaggggagcagataatataattgaaattcaagcatcagatagccagtgccaagcatac
tgtttcctagaagcagcagctactcctatcttaaaaaagcttgtatgcctctgtactctc
tctgctgctaattggaaatttgccactgttatctttgaccaatcaaggttcctcttaaag
gaacaagaaaaagtgataagtgatacttttcaccaaggtacaaatgatgaaagagaaatg
acgttcaagcatgctgctctcttacacctactggtaacagttagagatgtccttttaacg
tgtagcttggacacagcattgggatatttgtcaaatgcaaaagatgtctacaaaagcatt
ttaggctcctatttggatgacatttggagacagctggagattgtacattttactagaaaa
aaaaatcctgaaaccaactacaagatacaagaattgcaatgtcagatactaagttggatg
caaattcaacagcaaattaaggtgctgattataataagaatggactcagatggtgaaaaa
catttactcattaaaatgcttaacaaaatagacggtttaacattgactgtcctttattca
aatgaaagaaaaggttccctgaaatctaaaggcgttttaaatggtacctgttcctgtgta
gttgtacataatcaatatattggagcagatttcccgtggaatagtttctcatttgtggtg
gaatacaattatgcagaaaactcctgttggacaaaacactgtgagaagctgaatattcct
tatatggcctttaaaacgattcttccagacacagttttaaagagaagcagcttgctggat
agatttagtggttttcttttggaaattcaaattccatatgtgttttttgcatctgaagga
cttcttaatactccagaaattcttcagctgctagaatccaactataatatcacactagtg
gagagaagctgcagtgagtcactgaaactctttggaggtatagagcattatgtcgtggtg
acagttgatgaacacactgccataattttgcaggatctagaagaactgaattgtgagaag
gcatcagacaatatcatcatgagactgatggcattatcattccagtacacctgttgttgg
ataattttatattccagaaaaacattaaattcagagtatcatcttacagaagagacactt
catcacctagcactgatttatgcagctttggtttcatttggcctaaaatctgaagaactg
gatgtaaagcttataattgcaccaggaataaaagagactgcattgataattcgtcaaatt
gctgaccacaatttaatgacctccaagagagatcctcatgaatggttggataaatcctgg
ctcgaagtttcaccttctaaggaagaaatgtacttacttgattttccatgtattaatcca
ttggtggctcagctcatgttaaataaaggaccttcactgcaatggatattactagcaact
ctttgtcaacttcaggatctcctacctgaagttccagaaaaagtgttaaagcatttttgt
ggcatcacttccttattccagattaattcttcttccgtcacaaaatcacctcaaatttca
tcacctcaggaaaagaggaatcggactagtacctttgcttctcagaattcagctactagt
tcttcagactcagtcattcacgaacataatgaatcttaccaatattcagacttaggagag
gcggtacaggaagacacaaatactatttctaattataactcttcccttatggaactcaga
gaaatgccatgcattttaccatctgtgcattctttcagtcagaccagctactggaaagac
tccagttgtaaccaaaacacagtacagaataatccttttttaattagtacagaatcaagg
aaagcaacttgtcattcctttctaaaccagaatgattcagagtcagatgtctttggtttg
ggtctaacacaaatgaattgtgaaaccagaatatcaccaacttgtactcataagagagtt
gcccctaattttataaattatcagaaaaagagaacacatgaagtgaaaggatccataaat
aaagaagtatcttcccctgtgttttcactagagggctctcagtctcctcttcattggaaa
aacgtatgggaacagaatcactcattcaacctacaatatggtacatgtgacaaatggtac
tctcagaaagataatttattcactaatcagcaaaaatgtctatcagatgagttagaagac
ttcatatatgaaagttcaaatgctggtactaaaaagactttctggaaagaattaccatct
gcccccagtttggatttattttgttcttctaattctaatgtaaatcaaaagaaatttgac
agcctgtatttctgccaaagagctggaaaatgtttaggacagaaaaggtaccttgaatct
tcatctaatgcaggagacaaggaatcattaacaggtttcatgtactcacaactaccacaa
ttcaaaaaacgacgtctagtatatgaaaaagtccctggtagacccgatggacaaactcgt
ctgaggtttttttga
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