Trichechus manatus latirostris (Florida manatee): 101342664
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Entry
101342664 CDS
T05135
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101342664
03009 Ribosome biogenesis [BR:
tmu03009
]
101342664
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101342664
Spliceosome [BR:
tmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101342664
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
90S particles
Helicases
101342664
Pre-60S particles
101342664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
101342664
NCBI-ProteinID:
XP_004375128
UniProt:
A0A2Y9DI15
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASGMSLSEAQNGDVCEETVGGVKDKKSVKQC
MNAGLSEAQNGDMPKETLEKVKIKKSPKKFAILTNGEATTQPPNSESKKKKKKKKRKMED
VAGPDIKKAKAEDEEASEEGDAEAPAEAETRVEKPGDEDDSEVPGLPLGLTGAFEDTSFT
SLTNLVNENTLKAIKEMGFRNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVEL
IVKLKFMPRNGTGALILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLAN
GINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLIPVRRQT
MLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCASEKRFLLLFTFL
KKNRKKKLMVFFSSCKSVKYHYELLNYIDLHVLAIHGRQKQNKRTTTFFQFCNADSGILL
CTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRY
LKQSKVPLSEFEFSWSKISDIQSQLEQLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFN
VNNLDLPQVALSFGFKVPPFVDLNVNSSEGKCKKRGGGGGFGYQKARKVEKSKIFKNISK
KSPGSRQFSH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacctaccgatgaaactcctgcgaaagaagatcgagaagcggaacctgaaattg
cggcagcgaaacctaaagctacagggggcctcaggtatgagcctgtcagaagcccaaaat
ggagatgtgtgtgaagaaacagtgggaggtgtaaaagataaaaaatccgtaaaacagtgt
atgaatgcaggcttgtcagaagcccaaaatggagacatgcctaaagaaacactggaaaag
gtgaaaattaaaaaatcccccaagaaatttgccattttaaccaatggggaagcaacaaca
cagcctcccaattcagaatcaaaaaagaaaaagaagaagaaaaagagaaaaatggaggat
gttgctgggcctgacataaaaaaagcaaaagctgaagacgaagaggcatctgaagaaggt
gatgccgaggctcctgcagaagcagaaacaagggtggagaagccaggtgacgaagatgac
agcgaagtgcccggcctgcccctgggactcacaggagcttttgaggatacttcatttact
tctctaactaatcttgtcaatgaaaacactctgaaggcgataaaagaaatgggctttaga
aacatgactgaaattcagcataaaagtatcagaccacttctggaaggcagggatcttcta
gcagctgcaaaaacaggcagtggcaaaacccttgcatttctcatccctgcagttgaactc
attgttaaattaaaatttatgcccaggaatggaacaggagctcttattctctcacctacc
agggagctggccatgcagacttttggtgtgctaaaggagctgatgacgcaccacgttcac
acatatgggttgatcatggggggcagtaacagatctgctgaagcacagaaacttgctaac
gggatcaacatcattgtggccacaccaggccgcctcttggaccacatgcagaatacccca
gggtttatgtataaaaacctacagtgtctggttattgatgaggctgatcgtatcttggat
gttggatttgaagaggaattaaagcaaattattaaacttataccagtacgcagacagacc
atgcttttttctgccacacaaactcgaaaagttgaagacctggcaaggatttctctgaaa
aaggagcccttgtatgttggtgttgacgatgataaggccaatgcaacagtggatggtctt
gagcagggatacgttgtttgtgcctctgaaaaaagattccttttgctctttacattcctt
aaaaaaaaccgaaagaagaaactaatggtgttcttttcatcctgcaagtctgttaaatac
cactatgagctgctgaactacattgatttgcatgtcttggccattcatggaaggcagaag
caaaataagagaacaaccacattctttcaattctgcaatgcagattcggggatattattg
tgtacagatgtggcagctcgaggtctggatattcctgaagtcgactggattgttcagtat
gaccctccagatgaccccaaggagtatattcatcgtgtgggtagaacagccagaggccta
aatggaagagggcatgccttgctcattttgcgcccagaagaattgggtttccttcgttac
ttgaagcaatccaaggttcctctaagtgaatttgagttttcctggtccaaaatttctgat
attcagtctcagcttgaacaactgattgaaaagaactacttccttcataagtcagcccag
gaagcatataagtcatacattcgagcatatgattcccattctctgaaacaaatctttaac
gttaataatttagatttgcctcaagttgctctgtcatttggtttcaaggtgcctcctttc
gttgatcttaacgtgaacagcagtgaaggcaaatgtaagaagcgaggaggaggtggtgga
ttcggctaccagaaagccagaaaggttgagaagtccaagatctttaaaaacatcagcaag
aaatcacctggcagcagacagttctcacactga
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