Trichechus manatus latirostris (Florida manatee): 101342707
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Entry
101342707 CDS
T05135
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101342707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101342707
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
101342707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
101342707
NCBI-ProteinID:
XP_004368341
UniProt:
A0A2Y9D5S6
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MERIPSAQPPPACLPKAPGLEPGDLPGMDFAHMYQVYKSRRGIKRSDDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKILA
LQSGLQAGELSGRNVDAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQDGTSRKPSDPAPKTMDFKEKPSSLAKGSEGLGKNCVPVIQRTFPHSSGEQSGSDTD
TDSGYGGELEKGDLRSEQPYFKSDHGRRFATGERIGTIKQESEEPPTKKGRMQLSDDESH
FSSSDLIGSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALTSFMNPDKISAPLLMPQRLPSPLPTHPSIDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccacctcccgcctgcctgcccaaagcgccaggactg
gaacctggagacctaccagggatggattttgcccacatgtaccaagtgtacaaatcgagg
cggggaataaagcggagcgacgacagtaaggagacgtacaaactgccgcacaggctcatc
gagaagaagagacgtgaccggattaatgagtgcatcgcccagctgaaagaccttctaccc
gaacacctcaaacttacaactttaggtcacttggaaaaagcagtggttcttgaacttacg
ttgaagcatgtgaaagcactaacaaacctaattgatcagcagcaacagaaaatccttgcc
ctgcagagtggtttacaagctggtgagctgtcggggagaaatgttgatgcaggtcaagag
atgttctgctcaggtttccagacgtgtgctcgggaggtgcttcagtacctggccaagcac
gagaacactcgggacctgaagtcttcccagctcgtcacccacctccaccgagtggtctca
gagctgctgcaagatggtacctccaggaagccatcagacccagctcctaaaaccatggac
ttcaaggagaaacctagctccctggccaaaggctcagaagggcttgggaaaaactgtgta
ccggtcattcagcggactttccctcactcgagtggggagcagagcggcagtgacacagac
acagacagtggctacggaggagaattggagaagggtgacttgcgcagtgagcagccgtac
ttcaaaagtgatcatggacgcaggtttgccacgggagaaaggatcggcactattaagcaa
gaatccgaagaaccccccaccaaaaagggcagaatgcagctttcagatgatgaaagccat
ttctctagcagtgacctgatcggctccccattcctgggcccacacccgcaccagcctcct
ttttgcctacccttctatctgatcccaccatcagcaactgcctacctgcccatgctggag
aagtgctggtatcccacctccgttccagtgttatacccaggtctcaacgcttctgctgca
gccctcaccagcttcatgaacccagacaagatctcggctcccttgctcatgccccagaga
ctcccttctcccttgccaacccatccgtccatcgactcttccgctctactccaagctctg
aagcagatcccccctttaaacttggaaaccaaagactaa
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