Trichechus manatus latirostris (Florida manatee): 101343039
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Entry
101343039 CDS
T05135
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101343039
03015 mRNA surveillance pathway
101343039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101343039
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101343039
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101343039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101343039
NCBI-ProteinID:
XP_004387862
UniProt:
A0A2Y9E7G0
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKIKLDANGAVVKTNTNTEKTDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPTNRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCSNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIEGHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccacagactcgtgggccctggcggtggacgagcaggaagcagcggctgagtcgttg
agcaacttgcatcttaaggaagagaaaatcaaactagatgccaatggtgctgttgtcaag
accaatactaatacagagaagacagatgaagaagaaaaagaggacagagctgcccagtcc
ttactcaacaagctgatcagaagcaaccttgttgataacacaaaccaggtggaagtcctg
cagcgggatccaaattctcccctctactctgtgaagtctttcgaagagctccggctgaaa
ccacagcttctccagggagtctatgccatgggcttcaaccgtccatccaagatacaagag
aatgcattgcctttgatgcttgctgaacccccacagaacttgattgcccagtctcagtcg
ggtactggtaaaacagctgcctttgtgttggccatgctcagccaagtagaacccacaaac
agatacccccagtgtttgtgcctctccccgacgtatgagcttgcccttcaaacgggaaaa
gtgattgagcagatgggcaaattttaccctgaactgaagctagcttatgctgttcgaggc
aataaattggaaagaggtcagaagatcagtgagcagattgtcatcggcacccccgggacc
gtcctggactggtgttccaagctcaagttcattgaccccaaaaagatcaaggtgtttgtt
ctggatgaggctgatgtgatgatagctactcagggccaccaagatcagagcatccgtatc
cagaggatgctgcccaggaactgccagatgctgcttttctctgccaccttcgaagactct
gtgtggaagtttgcccagaaagtggtcccagacccaaacattatcaaactgaagcgtgag
gaggagacactggacaccatcaagcagtattacgtcctgtgcagtaacagagatgagaag
ttccaggccctgtgtaacctctatggggccatcaccattgcccaagccatgatcttctgc
catacacgcaagacagctagttggctggcagcagagctctcaaaagaagggcaccaggtg
gctctcctgagtggcgaaatgatggtggagcagagagctgcagtaattgagcgcttcaga
gaaggcaaagagaaggttctggtgaccaccaatgtatgcgcccgtggtattgatgtggaa
caagtgtctgtcgttatcaactttgaccttcctgtggacaaggatgggaacccagacaat
gagacgtacctgcaccggatcgggcgcactggccgctttggcaagaggggcctggccgtg
aacatggtagacagcaagcacagcatgaacatcctgaacaggatcgaggggcattttaat
aagaagatagagagattggacacggatgatttagacgagattgagaaaatcgccaactga
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