Trichechus manatus latirostris (Florida manatee): 101343071
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Entry
101343071 CDS
T05135
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101343071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tmu00535
]
101343071
Proteoglycans [BR:
tmu00535
]
Extracellular matrix (ECM) proteoglycans
Others
101343071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
CBM_4_9
Arylsulfotran_N
VWA_3
Motif
Other DBs
NCBI-GeneID:
101343071
NCBI-ProteinID:
XP_023583938
UniProt:
A0A2Y9QX64
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MKIFQCKMRYWLLPSFVAIAYFCTIVQGQVAPPTRLRYNVLSHDSIQISWKAPKGKFSGY
KLLVTPASGGKTNQLNLQNTATKAIIQGLMPDQDYAVQIIAYNKDKESKPAQGQFRIKDL
EKRKDPKPRVKVVDKGNGTRPSSPEEEVKFICKTPAIADIVILVDGSWSIGRFNFRLIRL
FLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFSTKDEVIEAVRNLPYKGGNTLTGL
ALNYIFENSFKPEAGARSGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADV
NELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDKEIKALATIGPPTELIT
SEVTARSFMVNWTHAPGNVEKYRVVYYPTRGGKPDEVVVDGSVSSTVLKNLMSLTEYQIA
VFAIYSRTASEGLRGTETTLALPVVADLELYDVTENSLRVKWNTVPGASGYLILYAPLTE
GLAEDEKEMKIGETHTDVELRGLLPNTEYTVTVYAMFGEEASDPVTGQETTLPLSPPRNL
RISNIGPNSARLSWDPTSTKITGYRIVYNNVDGTEINEVEVDSITTFPLKGLTPLTEYNI
AIFSMYDEGQSEPLTGIFTTEEVPSEQYLEIDEVTTDSFRVTWHPLSADEGQHKLMWIPV
YGGKTEEVVLEEDQDSYVIEGLEPGTEYEVSLLAVLDDGSESEVVTAVGTTFDSAWTEPA
TTIPPTTPVTSVFRTGIRNLVVDDETSSSLRVKWDISDSSVQQFRVTYLTAQGDPAEEVV
ATVMVPGSQNHLLLKPLLSDTEYKVTVTPIYTDGEGVSVSAPGKTLPLSGPRNLRVSEEW
YNRLRITWDPPSSPVKGYRIVYKPVSVPGPTLETFVGADINTILITNLLSGMDYNVKIFA
SQASGFSDALTGVVKTLPLDVTNLQANRIEMTNLCAQWQLHRHATAYRIVIESLQDKQKQ
ESTVGGGTTRHCFYGLQPDSEYKISVYTKLQELEGPSVSIMEKTRPLPTQPPTFPPTIPP
AKEVCKAAKADLVFMVDGSWSIGDDNFNKIVNFLYSTVGALDKIGADGTQVAMVQFTDDP
RTEFQLNAYKTKESLLDAIKRISYKGGNTKTGRAIKYVRDSLFTAESGTRRGIPKVIVVI
TDGRSQDDVNKISREMQSDGYSIFAIGVADADYSELVSIGSKPSARHVFFVDDFDAFKKI
EDELITFVCETASATCPLVHKYGIDLAGFKMMEMFGLVEKDFSSIEGVSMEPGTFNVYPC
YQLHEDALVSQPTKYLHPGGLPPNYTISFLFRILPDTPEEPFALWEILNKNSDPLVGVIL
DNGGKTLTYFNYDYSGDFQTVTFGGPEIRKIFYGSFHKLHIVVSKTLAKVVIDCKQVGEK
AINASANITSDGVEVLGRMVRSRGPNGNSVPFQLQMFDIVCSTSWANKDKCCELPGLRDE
ETCPELPNSCSCSELSKGALGPAGPPGSPGLRGPKGQQGELGPKGPEGLRGETGPSGPQG
PPGPQGPSGLSIQGMPGIPGEKGEKGDAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKDGA
SGPPGPPGLIGIPGAPGVPGITGSTGPQGALGPPGAPGLKGERGERGDLQSQAMVRAVAR
QVCEQLIQSHMARFTTILNQIPSHSSSVRTIQGPPGEPGRPGSPGAPGDQGPPGSPGFPG
NAGVPGTPGERGLTGIKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGPP
GHLGVPGPPGPSGQPGYCDPSSCSAYGGRASHPDQPEFTPVQDELEAMELWGPGI
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcagtgcaagatgcggtactggctgcttccaagttttgtggcaattgct
tatttctgcaccattgtccagggtcaagtggctccacctacaagattaagatataacgta
ttatctcatgacagtatacagatttcatggaaggctccaaaagggaaatttagtggatac
aaacttcttgtgactccagcttcaggtggaaaaaccaaccagttgaatctccagaacact
gcaacgaaagcaattattcaaggtctcatgccagatcaggattatgcagttcaaattatc
gcgtacaataaagacaaagaaagcaagccagcccaaggccaattcagaattaaagattta
gaaaaaagaaaggatccaaagcccagagtcaaggttgtggacaaaggaaatgggacaaga
ccatcctcgccagaagaagaagtgaaattcatctgcaaaactccagctattgctgatatt
gtaatcctggtcgatggttcatggagtattggaagattcaacttccgactgattcggctt
ttcttggagaacttggttacagcatttaatgtgggctcagagaagacacgaattggcctt
gcacagtatagtggtgaccccagaatagaatggcacttgaatgcctttagcacaaaggat
gaggtcatcgaagctgttcgaaacctaccgtacaagggaggaaacacactaacaggtctt
gccttgaactacatttttgaaaatagctttaaaccagaagcaggagcaaggagtggcgta
tccaaaattggcattttaatcactgatggaaaatcccaagatgatattattcctccatcc
agaaaccttcgtgagtctggtgtagaactgtttgccataggggtgaagaacgctgatgtg
aatgagctgcaggagatcgcctccgaacctgacagcactcatgtgtacaatgttgcggaa
tttgatctgatgcacactgttgtagagtccctgaccaggactgtctgctccagagtggaa
gaacaggacaaggaaatcaaagcccttgccaccattgggccacctacagagttgattact
tctgaagtcactgccagaagctttatggttaactggactcatgccccaggaaatgtggaa
aaatacagagtcgtgtattatcctaccaggggtggaaaaccagacgaggtggtggtagat
ggtagtgtgtcttccacggtgctgaaaaacttgatgtctttaactgaatatcagatagca
gtctttgcaatatattcccgcactgctagtgaaggcctccgtggaactgaaactacactt
gctttacccgtggttgctgaccttgaactgtatgatgtgactgagaacagtctgcgggtc
aaatggaacacagtgcctggggcatcggggtacctgatactctatgcacctctcactgag
ggtctggctgaggatgaaaaagagatgaaaattggagagacccacacagatgttgagttg
cgtggtttgttgcccaatacggaatacaccgtcaccgtttatgccatgtttggagaagag
gccagtgatccagttacaggacaagaaacaacattgcctttaagtccaccaagaaacctg
agaatctccaatattggccctaacagtgctcgattaagttgggacccgacatcaacgaag
atcactggttatcgaattgtatataacaatgttgatgggactgaaatcaatgaggttgaa
gttgattctatcactacatttcctctgaaaggcttgacaccccttacagagtataacatt
gccatattctccatgtatgatgaaggacagtcagagcctctgactggaatttttacaacc
gaggaagttccatctgaacaatacttggaaattgatgaggtgacgacagatagttttaga
gtgacctggcatcccctgtcggcagacgaagggcaacataagttgatgtggattccagtc
tatggtggaaagactgaagaggttgtcctggaagaagatcaagactcatatgttattgaa
ggcttggagcctggcactgaatatgaagtttcattgttggctgtacttgatgatggaagt
gagagtgaggtggtgactgctgtcgggactacatttgacagtgcttggacagaaccagcc
acgaccataccacctaccacacctgtgacttcagttttccggacaggaatcagaaacctg
gttgtagatgatgaaacctcttctagcctgcgggtaaaatgggacatttctgacagcagt
gtgcagcagttcagggtgacctatctgactgctcaaggggaccctgcagaagaagtggta
gcaacggttatggtacctggtagtcagaaccatctccttctgaagcctctgctttccgat
actgaatacaaagtcacggtgactcccatctacactgatggagaaggtgtcagtgtctca
gcccctgggaaaaccttaccactgtctggtcctcgaaacttacgggtctcagaggagtgg
tataaccgattgcgtattacatgggaccccccatcttcccctgtaaagggctatagaatt
gtctacaaacctgttagtgttcctggcccaacattggaaacttttgtgggagctgacatt
aacaccattcttatcacaaacctcctcagtgggatggactacaatgtgaaaatatttgcc
tcccaggcttcaggcttcagtgatgctctgacgggcgtggtgaaaacattgcccttggat
gtgaccaatctgcaagccaaccgcattgaaatgaccaacttgtgtgctcagtggcagttg
caccgtcacgctacggcctacaggatagttatagaatccctccaagataagcaaaagcaa
gaatccactgtgggtggagggacaaccaggcattgcttctatggacttcagcctgattca
gaatataaaatcagtgtttacacaaagctccaggaacttgagggacctagtgtgagcata
atggaaaaaacacgaccacttcctactcaaccaccgactttccctccgacaattccacca
gcaaaagaagtatgtaaagctgccaaagcagacctggtgtttatggtggatggatcctgg
agtatcggagatgataatttcaataagatcgttaactttctgtacagcactgttggagcc
ctggacaagattggtgcagatggaactcaagtggcaatggttcagttcactgatgacccc
agaacagaatttcagctaaacgcttacaaaaccaaagagtctcttcttgatgcgattaaa
cgtatttcatacaaaggaggaaatacaaaaacaggaagagccattaagtacgttcgagat
agcttatttactgcagaatcaggtacaaggagaggcatcccaaaggtgatagtggttata
actgatgggaggtcacaagatgatgtgaacaaaatttccagggagatgcaatcagatggc
tacagcatttttgcgattggtgtggcggatgcagattactcagagttggttagcattggc
agtaagcccagtgcccgccatgtcttctttgtggatgactttgacgcctttaagaaaatt
gaagatgagttgattacttttgtctgtgaaactgcatcagcaacctgcccactagtgcac
aaatatggcattgatcttgcaggatttaagatgatggaaatgtttggtttagttgaaaag
gacttttcatcaatagaaggggtatctatggagcctggtaccttcaatgtgtatccatgt
taccaacttcatgaagatgctctggtttctcagccaaccaagtatttgcatccaggagga
ttgccccctaactacaccatcagttttctgttccgaattctgcctgacactccagaggaa
ccatttgctctttgggagattttaaataaaaattctgacccgttggttggggtgatttta
gataacggtgggaaaaccctaacatatttcaactatgactacagtggggactttcaaact
gttacctttggaggacctgaaatcaggaaaattttctatggaagctttcacaagctacac
attgttgtcagcaagactttggccaaagtggttatagactgcaagcaagtgggtgagaaa
gcaataaatgcatcggctaatatcacatcagatggtgtggaagtcttggggagaatggtt
agatcaagaggcccgaatggaaactctgtaccattccagttacagatgtttgatattgtt
tgttccacatcatgggccaataaagacaaatgctgtgaacttccaggcctgagggacgaa
gagacctgcccagagcttccaaattcctgctcctgttctgaactcagcaaaggggctctg
ggaccagcaggaccaccaggtagtccaggactccgaggaccaaagggtcaacaaggtgaa
ctgggtccaaagggacccgagggccttcggggtgaaacaggcccttctggacctcagggt
cctcctggaccccaaggaccaagtggtctgtccattcaaggaatgcccggaataccaggg
gaaaaaggggagaaaggagatgctggtcttcctggaccgcagggtgtcccgggaggcgtt
ggttcgccaggacgtgatggctcacccggccagaggggttttcctggaaaggatggagcc
tctggccctccaggaccaccaggactgattggcattcccggagcccctggagtcccaggg
atcacaggaagcacaggacctcaaggcgccctgggaccacctggtgcccccggattaaag
ggagagcgaggagaacgaggagaccttcaatctcaagccatggtgagggcagtggcacgc
caggtgtgcgaacagctcatccagagtcacatggccaggttcacaaccatcctcaaccag
attcccagccactcctcatcagtccggaccatccaagggcctcctggggagcctgggaga
ccaggctctcctggagcccctggtgatcaaggacccccaggttcaccaggcttcccagga
aatgcaggcgtgcccgggaccccaggagaacgaggtctaactggtatcaaaggagaaaaa
ggaaatccaggcatcggaacccaaggtccaagaggcccccctgggccagcaggaccttca
ggagagagtcgacctggcagtcctggaccacctggctctcctggaccaaggggtccacca
ggccacctgggggtgcctggaccaccaggtccttctggccagcctggatactgcgaccct
tcttcttgttctgcctatggcgggagagcttcccatcctgatcagccggaattcacccct
gtccaagatgagctggaggccatggaactgtggggccctggaatctga
DBGET
integrated database retrieval system
