Trichechus manatus latirostris (Florida manatee): 101343163
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Entry
101343163 CDS
T05135
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101343163
03016 Transfer RNA biogenesis [BR:
tmu03016
]
101343163
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101343163
Spliceosome [BR:
tmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101343163
Transfer RNA biogenesis [BR:
tmu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101343163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
101343163
NCBI-ProteinID:
XP_004373101
UniProt:
A0A2Y9DEU9
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHIKFSKNGKDLGLAFEIPSHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALAKAPESYVTKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SLEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAIGGGNYKGHVDVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctctgagatgggtgttatgcctgagattgcgcaagctgtggaagaaatg
gattggcttctcccaactgatatccaggctgaatctatcccattgatccttggaggaggt
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccagtt
attcagatagtttatgaaactctgaaagatcaacaggaaggcaagaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaaatggcaaatgaacccatatgacagaggatct
gcttttgcaattgggtctgatggtctttgttgtcaaagcagagaagtaaaggaatggcat
gggtgtagagctactagaggattaatgaaagggaaacactactatgaagtatcctgtcat
gaccaaggattatgtagagttgggtggtctaccatgcaggcttccttagacctaggtact
gacaagtttggatttggctttggtggaacgggaaagaagtcccataataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttacctcgatatagataaa
gggcatatcaagttctccaaaaatggaaaagaccttggtctggcatttgaaataccatca
catataaagaaccaagccctctttcctgcctgtgttttgaagaatgctgaattaaagttc
aattttggtgaagaagaatttaagtttccaccaaaagatggttttgttgctcttgccaaa
gcaccggagagttacgtcaccaaatcgcagcatacaggtagtgcacaggtggcacaaaca
aagtttctccccaatgctccaaaagctctcatcgtcgagccctcccgggaattagctgaa
caaactctgaataacgtcaagcagtttaagaaatacattgataatcctaaattaagggag
cttctgataattggaggtgttgctgcccgagatcagctttctgttttggataatggggta
gatatagttgtaggcactccgggaagactagatgatttggtgtcaactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggctat
tctgattttataaacaggattcacaatcagattcctcagattacctctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcattcttttgatgtaaagaaactgtctgag
aagataatgcactttcccacttgggttgatttaaaaggagaagattccgttccagatact
gtacatcatgttgttgtcccagtgaatcccaaaactgacagactctgggaaagacttgga
aaaaaccacattagaactgatgaagtacacgcaaaagataacactagacctggtgctaac
agtctagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattatcttctgtagaaccaaaatcgactgcgat
aacttggagcagtattttatgcaacaaggaggaggacctgataaaaaagggcaccagttc
tcatgtgtttgtcttcatggtgacagaaagcctcatgagcgaaagcaaaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgcacagatgtggctgctagaggaattgat
atccatggtgttccttatgttataaatgtcaccctgcctgatgaaaagcaaaactatgta
catcgaattggcagagtaggaagagctgaaaggatgggtctggccatttctctggtggca
acagaaaaagagaaggtttggtaccatgtatgtagcagccgtggaaaggggtgttacaat
acaagactcaaggaagatggtggctgtaccatatggtacaacgagatgcagttgctgtct
gagatagaagaacacctgaactgtaccatttctcaggttgagccagatataaaggtacca
gtggatgaatttgacggaaaggttacctatggtcaaaaaagggccattggtggtggaaac
tataaaggccatgtggatgttttggcacctacagttcaagagttggctgcccttgaaaag
gaggcacagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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