Trichechus manatus latirostris (Florida manatee): 101343292
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Entry
101343292 CDS
T05135
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101343292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101343292
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101343292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101343292
NCBI-ProteinID:
XP_004388800
UniProt:
A0A2Y9E920
LinkDB
All DBs
Position
Unknown
AA seq
235 aa
AA seq
DB search
MAGEMQIDTPIRAETGAEAGPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVLLRPKTGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGNLVLDPTLKQEKEARAV
LTFALDSVERKLLMSTTKGLYSNAELQQCLAAAQAASQHVFHFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggagatgcagatagacaccccgatccgcgctgagactggggccgaagctggc
ccacggggccccggctgtagcctccggcactttgcctgcgaacagaatttgctgtcccgg
ccggatggctcggcctctttcctgcaaggtgatacctctgtcctcgcgggtgtgtacggg
ccagccgaggtgaaggtcagcaaggagatcttcaacaaggccacactggaagtgcttctg
aggccgaagactgggctgccaggtgtcgcggagaagagccgggagcggctgatcagaaac
acatgcgaggcggtggttctgggggcactgcacccccgcacctccatcaccgtggtgttg
caggttgtcagtgatgctggctcccttctggcctgttgcctgaatgctgcgtgcatggca
ctggtggatgcaggtgtgcccatgcgggccctcttctgtggggttacctgtgccctggac
tctgatgggaatcttgtgctggaccccacactaaagcaagaaaaggaggcgcgggcagtc
ctgacctttgccctggacagtgtggaacggaagctgctaatgtccaccacaaagggactg
tactccaatgctgagctccagcagtgtctggctgcagcccaggctgcctcgcaacatgtc
ttccacttctaccgggaatccctccagaggcgttactccaagagctga
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