Trichechus manatus latirostris (Florida manatee): 101343491
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Entry
101343491 CDS
T05135
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101343491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
101343491
NCBI-ProteinID:
XP_004372540
UniProt:
A0A2Y9DDD9
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All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MKLFLSVFQNSSENMLPQIAFLLLMALNFVHGVFYAERYQTPTGIKGPPPNTKTHFFIPY
AIKSKGIPVRGEQGIPGPAGPAGPRGQPGPSGPPGKPGYGSPGPRGEPGLPGPPGPSVTG
KPGVPGLPGKPGERGPYGPKGDIGPAGLPGPQGPPGPPGIPGPAGLSVPGKPGQQGPTGA
PGPRGFPGENGAPGVPGMIGQKGETGYGAPGRAGERGLPGAQGPVGPPGPTGVGKRGENG
LPGQPGIKGDRGFQGERGPTGPPGPQGPPGEQGLEGIGKPGPTGAPGQPGIPGAKGHPGA
PGIAGPPGAPGFGKPGLPGLKGQRGPAGLPGSPGVKGEPGPAGYPGEPGLPGPPGNMGPQ
GPKGIPGNHGIPGSKGETGPAGTAGHPGAKGERGFPGLDGKPGYAGEPGLDGPKGNPGLP
GPKGDPGVGGSPGLPGPMGPAGAKGVPGHNGDPGPRGAPGIPGTRGPIGPPGIPGFPGAK
GDPGYPGPPGPAGIATKGLSGPTGPAGPPGPRGHAGEPGLPGPPGPPGPPGQAVMPEGFI
KAGQRPSLSGMPLVRANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYNPRT
GIFTCVIPGIYYFSYNMHVKGTHVWVGLYKNGTPIMYTYDEYTKGYLDQASGSAVIDLAE
NDQVWLQLPNAESNGLYSSEYVHSSFSGFLVAPM
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattcctttctgtttttcagaattcatctgagaatatgctgccacaaatagcc
tttttgctgctaatggccttgaactttgttcatggagtgttttatgctgagcgataccaa
acacccacaggcataaaaggcccaccacctaacaccaagacacacttcttcattccctat
gccataaagagtaaaggcataccagtaagaggagagcaaggtattcctggaccagcaggc
cctgctggacctcgaggacagccaggtccttctggaccgccaggaaaaccgggctacgga
agtcctggacccagaggagagccggggttgccaggaccaccaggaccatcagtcactgga
aagccaggtgtgccaggactcccaggaaaaccaggagaaagaggaccatatggaccaaaa
ggagatattggaccagctggtttaccaggaccccagggtccaccagggccacctggaatc
cctggcccagctggactttctgtgccaggaaaacctggacaacagggacctacaggagcc
cctggacctagaggctttcctggcgaaaacggagcaccaggtgtccctggtatgattgga
cagaaaggggaaacaggatatggtgctcctggccgtgcaggtgagaggggccttccgggc
gctcagggacctgtgggaccacctggacctactggagtaggaaaaagaggtgaaaatggg
cttccaggacaaccaggcatcaaaggtgatcggggctttcaaggggaaaggggacccact
ggcccaccaggtccacaaggtcctcctggggaacaaggactagaaggcattggaaagcca
ggacccactggagccccaggtcagccaggaattccaggagcaaaaggtcaccccggggct
ccaggaatagctgggcccccaggggctccaggctttgggaaaccaggcttgccaggcctg
aaagggcaaagaggacctgctggccttccagggagtccaggtgtcaaaggggaaccgggt
ccagcaggttatcctggggaaccaggtctgccaggaccccctggaaatatgggaccccaa
ggaccaaagggcatcccaggtaaccatggtatcccaggctctaaaggtgagacagggcca
gcagggactgctggacaccctggggctaagggagaaagaggcttccctggtttagatgga
aaaccagggtatgcaggagaaccaggtctcgatggtcctaaaggtaacccaggtttacca
ggcccaaaaggtgatcctggagttggagggtctcctggtcttccaggtcctatgggccca
gcaggagctaagggagtgcctggacataatggtgaccctggtccaagaggtgcccctgga
ataccaggtactagaggccccattgggccaccaggcattccaggattccctggagctaaa
ggggatccaggatatccaggtcctcctggcccagctggcatagcaactaagggcctcagt
ggaccaactgggccagctggacctccaggcccaagaggtcatgctggagagcctggcctc
ccagggcctccagggcccccaggtcccccaggacaagcagtcatgcccgagggcttcata
aaggcaggccaaaggcccagtctttctggaatgcctcttgttagggccaatcagggtgtt
acaggaatgcctgtgtctgcttttactgtcattctctccaaagcttacccagcaataggc
acccccatcccatttgataagattttgtataacaggcaacagcactataacccaagaact
ggaatctttacctgtgtgataccaggaatatactatttctcctacaacatgcatgtgaag
gggacccatgtttgggttggcctatataagaacggcacccccataatgtacacctatgat
gaatatactaaaggctacctggatcaggcttccgggagcgcagtaattgatctcgcagaa
aatgaccaggtgtggctccaattgcccaatgctgagtctaatggcctgtactcctctgag
tatgtccactcctctttctcaggattcctagtggctccaatgtga
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