Trichechus manatus latirostris (Florida manatee): 101343548
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Entry
101343548 CDS
T05135
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101343548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101343548
03032 DNA replication proteins [BR:
tmu03032
]
101343548
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101343548
mRNA cycle factors
Common to processing body (P body) and stress granule
101343548
DNA replication proteins [BR:
tmu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
101343548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
101343548
NCBI-ProteinID:
XP_004388542
UniProt:
A0A2Y9E8T9
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MSQGPPTGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGD
LSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQ
SEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRCKDIKRLLVNFMYLQSLLQP
KSSSVDSELTSLCQSVLEDFNLCLFYLPSSPSLSLASEEEEEYESGYAFLPDLLIFQMVV
ICLMGVHSLKRAGSRQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVSAFQSDGADE
PESREPLEKEEEPGPEPPSAAPQAGKVRKSRKISRLSCLRRRRHPPKAGDDSDLSEGFES
DSSRDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDIEDEEGARSPALE
PPRARSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPPTEPHN
LASCRPCVNGDVDKPSEPASEEGSESEESESSGHSCRNERSIQEKLQVLMAEGLLSAVKV
FLDWLQTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQESGLDLCPEVQDLLEGCELP
DLPASLLLPEDTALRNLPPLRAAHRRFNFDAERPLLSALEESVVRICCIRSFGHFVARLQ
GSILQFNPEVGIFVSIAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQL
EGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLASSGRFIVIIPRTVIDGLDLLKKEHP
GARDGIRYLEAEFKKGNRYIRCQKEAGKSFERQKLKRQDADAWTLYKILDSCKQLTVAQG
AGEDDPSGMVTIVTGLPLDNPSSLSGPMQAALQAAAHASVDIRNVLDFYKQWKEIG
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggccccccgacaggggagagcagcgagcccgaagcaaaggtcctccacact
aagcggctttaccgggctgtggtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccagagaacattagcctgaggaacaagctgcgt
gagctctgcgtcaagcttatgttcctgcacccagtggactatgggaggaaggctgaggag
ctgctatggagaaaggtatactatgaagttattcagcttatcaagactaacaaaaagcac
atccacagccggagcaccttggaatgtgcctacaggacacacctggttgctggtattggc
ttctaccagcatctccttctctatatccagtcccactaccagcttgaactgcaatgctgc
atcgactggacccatgtcaccgaccccctcataggatgcaagaagccagtgtctgcctca
gggaaggagatggattgggcacagatggcatgccaccgatgtctagtgtacctgggggat
ttgtcgcgataccagaatgaattagctggtgtagacactgagctgctggctgagagattt
tactaccaagccctgtcagtagctccccagattggaatgcccttcaaccagctgggcacc
cttgcaggcagcaagtactataatgtggaagccatgtattgctacctacgctgcatccag
tcggaagtgtcctttgagggagcctatgggaacctcaagcggctatatgacaaggcagcc
aaaatgtaccaccagctgaagaagtgcgagactcggaaactctctcccagcaagaagcga
tgtaaggacattaagaggttgctggtgaacttcatgtatctacaaagtctcctgcagccc
aagagcagctcggtggactcggagctgacgtcactttgccagtcggtcctggaggacttc
aacctctgtctcttctacctgccatcctcacccagcctcagcctggccagcgaggaggag
gaggagtacgagagtggttacgcttttctcccggacctgctcatctttcagatggtcgtc
atctgcctgatgggtgtgcacagcttgaaaagagcagggtccaggcagtacagtgcagcc
atcgccttcaccctggccctcttctcccatctcgtcaatcacgtcaacatccgcctgcag
gctgagctggaggagggcgagaaccccgtgtcggcgttccagagtgacggtgcagatgag
cccgagtccagggaaccactggagaaagaggaggagccagggcctgagccgccttctgca
gcacctcaagcgggcaaggtcagaaagagccgtaagatctcccgtctctcttgcttgcgc
cgccgccgccacccacccaaagctggtgacgacagtgacctgagtgaaggctttgaatca
gactcgagccgtgactcggctcgtgccagtgagggctcggacagcggctcagacaagagt
ctcgaaggtggaggaacagcctttgatgccgagacagactcggaaatgaacagccaggag
tcccgatcagacctggaagatatagaggatgaggagggggcacgttccccagccctggag
cccccgcgggccaggtcagaggctcccgagtccctcaatggcccactgggccccagcgag
gccagcattgccagcaatttacaagccatgtccacccagatgttccagaccaagcgctgc
ttccgactggcccccaccttcagcaacctgctcctccagccccccactgaacctcacaac
ttggctagctgcaggccctgtgtcaacggggatgtggacaagccctcagaaccagcctct
gaggagggctctgagtcggaggagagtgaatccagtgggcattcatgtcgtaatgagcgc
agcatccaggagaagctgcaggtcctgatggccgaaggcctgctctctgccgtgaaagtc
ttcctggactggctgcagaccaaccccgacctcatcatcgtgtgtgcacagagctcccaa
agcttgtggaaccgtctgtctgtattgctgaatctgttgccagctgctggcgaactccag
gagtctggcctggatctgtgccctgaggtccaggacctccttgaaggctgtgagctgcct
gacctgcccgcttccctgctgctcccagaggacacagcactccgcaacctgcccccgctc
cgggctgcccaccggcgctttaactttgacgccgagcggcccctgctcagcgccctagag
gagtcggtggtgcgcatctgctgcatccgcagctttggccacttcgttgcccgcctgcag
ggcagcatcctgcagttcaaccccgaggtcggcatcttcgtcagcatcgcccagtcagag
caggagagcctgctgcagcaggcccaggcccagttccgcatggcacaggaggaggctcgg
cgcaacaggctgatgagggacatggctcagctccgccttcagctcgaggtttcgcagttg
gagggcagcctgcagcagcctaaggcccagtcggccatgtccccctacctcgtccctgac
acccaggccctctgccaccacctccctgtcatccgccagctggccagcagtggccgcttc
attgtcatcatcccgaggaccgtgattgatggcctggatctgctgaagaaggaacaccca
ggggcccgggatgggatccgctacttggaggcagagtttaaaaaagggaacaggtacatt
cgctgccagaaagaggcgggaaagagctttgagcggcagaagctgaagaggcaggatgca
gatgcctggacgctctataagatcctggacagctgcaaacagctgactgtggcccaaggg
gcaggcgaagatgacccaagcggcatggtgaccattgtcacaggcctcccactggacaac
cccagctccctttcaggccccatgcaggcagccctgcaggccgctgcccatgccagcgtg
gacatcaggaatgttctggatttctacaagcagtggaaggagattggctga
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integrated database retrieval system
