Trichechus manatus latirostris (Florida manatee): 101343564
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Entry
101343564 CDS
T05135
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03015
mRNA surveillance pathway
tmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101343564
09122 Translation
03013 Nucleocytoplasmic transport
101343564
03015 mRNA surveillance pathway
101343564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101343564
03041 Spliceosome [BR:
tmu03041
]
101343564
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101343564
Spliceosome [BR:
tmu03041
]
Complex C
Other components
EJC/TREX
101343564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
101343564
NCBI-ProteinID:
XP_004389981
UniProt:
A0A2Y9EB74
LinkDB
All DBs
Position
Unknown
AA seq
1340 aa
AA seq
DB search
MPCDWFCITNATVVIEGLTKAVGGVSWVRSKGVGGNYRRCPKPSGRDPSTSRKMAELEEV
TLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAAFQPNS
QIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVASLLPP
DFQSSRERPELELSRHSPRKSSSVSEEKGESDDERPRKGERRSPRVRQARAAKLSECSQT
AEEEEDQEAPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEEEEENEVQKSREAPILKQFE
EEEEEEEMSRAKPEEVMDERPKTIRSQEEEGLEKGGRVTRSQEETRRSHLARHQQEKEMK
TASPLEEKEREIKSSKGLEGNSKSPSPPQLTEDLEKVPLILQREQTASEEETLPPLLTKE
PCSPSPNIQLRSEEEVDPVEGPAPPVLVQLSPPNADAEARELLVAQHTVRLVGGLSPLLS
PTDTKVESPAEKMPEESVLPLVHKSTLAESSIQKGLETEPEKSAQPLPLKIEELAPPKGI
TEESLKQPSLEQKESKRASHTLRPSHSSKRSPDSSSSSRSSSSSSSTSRSRSRSPDSSGS
RSHSPPRSKHRDGSRARSHSSPHSRLKMGSRSTSESRSRSRSHSRSRSASSNSRKSLSPR
ISRDSNTSYTETKDPSSGQEVATPPVPQLQVLEPKERTATSSSSIQVRRVSQPEPPEKHV
RLQPEQGSPKKCEAEEAEPPAATQPQTSETQTSQQPESERIQHTVEEKEEVNMDTTENRP
ENEIPEPPMPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSASKGVPAGNSDTE
GGQPGRKRRWGASTATTQKKPSISITTDSLKSLIPDIKPLAGQEAVVDLHADDSRISEDE
TERNGDDGTHEKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPVAPQVSVEVALP
PPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVR
PFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKF
LCADYAEQDELDYHRGLLVDRPSETKAEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERA
VREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEK
VQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQK
EREKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRERDRRDT
KRHSRSRSRSTPVRDRGGRR
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgactggttttgcatcactaatgcaactgtggtaatcgaggggttgactaag
gcagtgggcggggtcagctgggtacgttcgaagggcgttggcggaaattaccgaagatgc
ccgaagccgtcgggacgggacccgagtacctcacgcaagatggcggagctggaggaggtg
actctggacgggaagcctcttcaggcgctgcgggtgaccgacctgaaggccgcactggag
cagcgaggcctagccaaaagcgggcagaagagtgccctggttaagcggcttaaaggggct
ctaatgctagaaaatttacagaaacactcgacaccccatgctgcattccagccaaattcc
cagattggtgaggaaatgagccagaacagtttcataaagcagtatctggaaaagcagcag
gagttgcttaggcagcgtctggaacgtgaagctcgagaagctgcagaacttgaagaagcc
tcagctgagtcggaggacgagatgatccatcctgagggagtggcttccctgctgcctcct
gactttcagagcagccgggagagaccagagctggagctcagcagacattcgccccgaaag
agctcctctgtttctgaagaaaaaggtgaatctgatgatgagagaccaaggaaaggagaa
aggcgatctcctagagtcagacaggcaagagcagctaaactctctgagtgcagccagact
gctgaggaagaagaggaccaagaagcaccttccagaaatctgagggtcagagcagatcga
aatttgaaaacagaggaggaagaagaggaggaggaggaggaagaagaagaggaggaggag
gaggaagaagaaaatgaggttcaaaagtctagagaggcaccaatcctgaaacagtttgag
gaggaagaagaggaggaggagatgtccagagcgaaaccagaggaggtgatggatgagaga
cccaaaaccataagatcccaggaggaggaagggttagagaaaggagggagagtgacaagg
tcccaggaagagaccagaagaagtcatctggccaggcatcagcaagagaaagagatgaaa
acagcttctccccttgaagagaaagaaagagaaataaaatcttcgaaaggcttggaggga
aattcgaagtccccttcccctcctcagttgactgaagatctagagaaggtccctcttatc
ctacaacgagagcaaactgccagtgaggaggagactctcccacctttacttaccaaggaa
ccctgttcaccatcacctaatatacagctccggagtgaagaagaggtagatcctgtggaa
ggcccagcaccccctgttctcgttcagttatctcctcctaatgcagatgctgaggccagg
gagctgttagtagctcagcatactgtccggttggtgggaggcctgtctcctttgttgagt
cctacagacaccaaagtagaatctcctgcagagaaaatgccagaggagagtgtactgcct
ctagttcataaaagcacactggctgaatcctcaatacagaagggtcttgaaactgagcca
gaaaaatctgctcagccactccctctaaaaattgaagaattagcaccacccaaagggatc
actgaggagtctctgaaacagccgtctttggaacaaaaggaaagcaaaagggcttctcat
actcttcgcccaagccacagttcgaagcggtcacctgactcctcatcctctagccggtct
tcctcttcttcatcctccacttcaagatcaagatctcgctctcctgacagctcaggctct
cgatctcactcacctccacgatccaagcatagagatggatcccgggcacgttctcactcc
agccctcatagtagactgaagatgggctctagatcaacatcagagtccaggtcacgttcc
cgttcccattctcgttcacgttcagcatcaagcaacagcagaaaatctctgagccctaga
atctccagggacagcaacaccagctacactgaaaccaaagatccctcttctggtcaggag
gttgcaactccaccagtaccacaactgcaggtccttgagccaaaggagaggactgccacc
tcctcgtcttctatccaagtgaggcgtgtgagccagcctgagccacccgaaaagcatgtg
aggttacaacctgagcaagggagcccaaagaagtgtgaagctgaagaggcagagccacca
gctgccacacagccccaaacctcagagactcagacctctcagcaaccagaatcagaaagg
attcagcacactgttgaggagaaggaggaagtgaacatggacacaactgaaaacagacct
gaaaatgagattccagagccccccatgcctattgcagaccaagtcagcaatgatgaccgc
cctgagggcagtgctgaagatgaggagaagaaagagagctcactgcccaaatcattcaag
aggaagatctccgtcgtctcagccagcaagggggtaccagctggaaacagtgacacagag
gggggccagcctggtcggaaaagacgttggggagccagcacagccaccacacagaagaaa
ccctccatcagtatcaccactgactcactcaagagcctcatccccgacatcaaacccctg
gcggggcaggaggctgttgtggatcttcatgctgatgactcccgcatctctgaggatgag
accgagcgtaatggtgatgatgggacccatgaaaaggggctgaagatatgccgaacagtc
actcaggtagtacctgcagagggccaggagaatgggcagagagaagaagaggaagaagag
aaggagcctgaagcagaaccacctgtagctccccaggtttcagtagaggtggccttgccc
ccacctgtggagcatgaagtaaaaaaggtgactttaggagataccttaactcgacgttcc
attagccagcagaagtctggagtttccattacaattgacgaccctgtcagaactgctcag
gtgccctccccaccccggggcaagatcagtaatatagtccacatctccaatttggttcgt
ccattcactttaggccaactgaaggaattgttgggacgtacaggaaccctggtggaagag
gccttctggattgacaagattaaatctcactgctttgtaacgtactcaacagtagaggaa
gctgttgccacccgcacagctctgcatggggtcaaatggccccagtccaatcccaaattt
ctttgtgctgactatgctgagcaagatgagctggactatcaccggggcctcttggtggac
cgtccctctgaaactaaggcagaggaacagggagtcccacggcccctgcaccccccgcct
ccacccccagcccagccaccacagcacccccgggcagagcagcgggaacaggagcgggcg
gttcgggaacagtgggcagagcgggaacgggaaatggagcggcgggagcgaactcgatca
gagcgcgaatgggatcgggacaaagttcgagaagggccccgttctcgatcacggtcccgt
gaccgccgccgcaaggaacgtgcgaagtctaaagaaaagaagagtgagaagaaagagaaa
gtccaggaggaaccacccgccaagctgctggatgatcttttccgcaagaccaaggcagcc
ccctgcatctattggctcccactgactgacagccagattgttcagaaggaggcagagcgg
gctgaacgggccaaggagcgggagaagcggcgaaaggagcaagaagaagaagagcagaag
gaacgggagaaggaagctgagcgggaaaggaaccgacagctggagcgggagaaacgtcga
gagcacagccgggagagggacagggaaagagagagggaaagggaacgagacaggggggat
cgagatcgagatagggaaagggacagggaacgaggcagggagagagatcgccgagacacc
aagcgccacagcaggagccggagtcggagcacacctgtgcgggaccggggtgggcgccgc
tag
DBGET
integrated database retrieval system
