Trichechus manatus latirostris (Florida manatee): 101343761
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Entry
101343761 CDS
T05135
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu05014
Amyotrophic lateral sclerosis
tmu05200
Pathways in cancer
tmu05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101343761
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101343761
09162 Cancer: specific types
05216 Thyroid cancer
101343761
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101343761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101343761
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101343761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
101343761
NCBI-ProteinID:
XP_004372976
UniProt:
A0A2Y9DF45
LinkDB
All DBs
Position
Unknown
AA seq
2436 aa
AA seq
DB search
MPSSGLVPRSRQKGRPMTARGFEGSRRGSLRRAGTREPPSEATEATAQTPGFSWSSSFLS
TSAPSAAAAPAPADMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKF
KVESEQQYFEIEKRLSHSQERLVNETRECQNLRLELEKLSSQLKAVTEKNKELEIAHDRS
IAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKDSNTTKGELQLKL
DELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNL
ENKKEEVSRMEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHMKLS
NLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLEKI
EKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQ
DQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQ
RLREDTDKANKHCSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADI
SSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQFKLESS
LTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVVIPLQASNLDDISVLSTPKRSS
TSQTTSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKTDNEKIQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLSCQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNL
HLNTKELLKNAQKEIAALKQHLSNMEVQLTSQSSQRSGKGQPSDKEDVDELRSQLRQTEE
QVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK
KLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRAGTALSNEQQARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQASKMASVRQHLEETTQKAESQLLE
CKASWEERERVLKDEVSKCVSRCEDLEKQNRLLHDQIEKLSDKVVASVKEGIQGPLNVSL
SEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAER
EKVQVTAKTIAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTK
RIQQLTEELGRLKAEIARSNASLTNNQNLIQSLREDLNKVRTEKENIQKDLDAKIVDIQE
KVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLSQA
ETKSKSLESQVENLQKTLSEKEMEAKNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQI
TEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSEPPT
ANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQ
EAMQSEGPVEHVPVFGSTSGSVRSTSPNIQPSISQPILTVQQQTQATAFVQPTQQSHPQI
EPANQELSPNVVEVVQSSPIERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEASDQV
SDDTVEMPVPKKLKSVTTVGPEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPM
EDSEETSQSLQIDLGPLQSDQQTTSSQDAQGKGDDVIVIDSDDEEEDDDENDGEHEDYEE
DEEEDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGES
SQRAADSQNSGEGNTGAAELSFSREISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESATSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVF
VEAESEGISSEASLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVR
LQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggcttagtacctagaagccgccaaaaaggacgacccatgacagcccgg
ggctttgaggggtcccgccgcgggagtctgcggcgggcaggtacgcgggagcccccgagc
gaggcgacggaggcgacggcccagactcctgggttctcctggtcttcatctttcttgtct
acttctgccccatcggccgctgcggcccctgcgccggccgacatggcggcggtattgcag
caagtgctggagcgcacggagctgaacaagctgcctaagtccgtccagaacaaacttgaa
aagttccttgctgatcagcagtccgagatcgatggcctaaaggggcggcacgaaaaattc
aaggtagagagtgaacaacagtacttcgagatagagaagaggctctcccacagtcaggag
agacttgtgaatgaaacccgagaatgccagaacttgcggcttgaactagaaaaactcagc
agtcagctgaaggcagtaactgagaaaaataaagaacttgaaattgctcatgatcgcagc
attgccattcagagccagtttacaagaacaaaggaagaattagaagctgagaaaagagac
ttaattaggaccaatgagagactatctcaagaacttgaatatttaacagaggacgtcaaa
cgtctaaatgaaaaacttaaagacagcaatacaacaaagggtgaacttcaattaaaatta
gatgaacttcaagcttctgatgtttctgttaagtatcgagaaaaacgtttggagcaagaa
aaggaattactgcataatcagaatacatggctgaatacagagttaaaaaccaaaactgat
gaacttctggctcttggcagagaaaaaggaaacgagattctagagcttaaatgtaatctt
gaaaacaaaaaagaagaggtttctagaatggaagaacagatgaatggcttgaaaacatca
aatgaacatcttcaaaagcacgtagaagatctcttgaccaaattgaaagaggccaaggaa
cagcaggccagtatggaagagaaattccacaatgagttgaacgctcacatgaaactctct
aacctgtacaagagtgctgctgatgactcagaagcaaagagcaatgaactgacccgggca
gtggatgaactacacaaacttttgaaagaagctggagaagccaacaaagcaatacaagat
catcttctagaggtggaagaatctaaagatcaaatggaaaaagaaatgcttgagaaaata
gagaaattggagaaggaactggagaatgcaaatgacctactttctgccacaaaacgtaaa
ggagccattttatctgaagaagaacttgcagccatgtctcctactgcagcagctgtagct
aagatagtgaaacctggcatgaaattaactgagctatataatgcttatgtggaaacacaa
gatcagttgcttttggagaaactagagaacaaaagaattaataagtatctagatgaaata
gtgaaagaagttgaagccaaagcaccgattttgaaacgccagcgggaagagtatgaacgt
gcacagaaagctgtggcaagtttgtctgttaaacttgaacaagctatgaaggagattcag
cggttgcgggaggacactgataaagcaaataaacattgttctgtgcttgaaagagacaat
caaagaatggaaatacaaataaaagatctttcacaacagattagagtgcttttgatggaa
cttgaagaagcaaggggtaaccatgtaattcgtgatgaggaagtaagctctgctgatata
agtagttcatctgaagtaatatcacagcatctagtatcttacagaaatattgaagagctt
cagcagcaaaatcagcgtctcttagtggcccttagggaacttggggaaactagagaaaga
gaagaacaagaaacaacttcatccaaaatcaccgaacttcaattcaaacttgagagctcc
ctcactgaattggaacagcttcgtgaatcacgacaacatcagatgcagcttgtcgattcc
atcgttcgtcagcgtgatatgtaccgtattttgttgtcacaaacaacaggagttgtcatt
ccattacaagcttcaaacttagatgacatttctgttttgtcaactccaaaacgttcaagt
acatcacagactacttccactcctgctccagtacctgttattgagtcaacagaggctata
gaagctaaggctgcccttaaacagttacaggaaatttttgagaactacaaaaaagaaaag
acagataatgaaaagatacaaaatgagcagcttgagaaacttcaagagcaagttacagat
ttgcgatcacaaaacaccaaaatttctacccagctagattttgcttctaaacgttatgaa
atgctacaagataatgttgaaggatatcgccgagaaataacatccctacatgagagaaat
cagaaactcactgcaacaacgcaaaaacaggaacagatcatcaatactatgactcaggat
ttgagaggagcaaatgaaaagctggctgttgcagaagtaagagcagaaaatttgaagaag
gaaaaagaaatgcttaaattgtcagaggtccgtctttctcaacagagagagtctttgtta
gctgaacagagagggcaaaacttacttttaactaatctgcaaacaattcagggaatacta
gagcgatctgaaacagaaaccaaacaaaggcttagttgccagatagaaaaactggaacat
gaaatatctcatctaaagaagaagttggaaaatgaggtggagcaaaggcatacacttact
agaaatctagatgttcaacttttggatacaaagcgacagctggatactgagacaaatctt
catcttaacacaaaagaactgctaaaaaatgctcaaaaggaaattgctgcattgaaacag
cacctcagtaatatggaagtccaacttacttctcagtcttcacaaagaagtgggaaaggt
cagcctagtgacaaggaagatgtggatgagcttcggagtcagctgaggcaaacagaagag
caggtgaatgatttgaaggagagactcaaaacaagtactagtaatgtggaacagtatcga
gcaatggttactagtttagaagaatccctcaacaaggaaaaacaggtgaccgaagaagta
cgtaagaatattgaagttcgtttaaaagagtcagctgagtttcagacacagttggaaaag
aagttgatggaagtagaaaaggaaaaacaagaacttcaagatgacaagagaaaagccata
gagagcatggaacaacagttatctgagttaaagaaaacactttctagtgttcagaatgaa
gtacaagaagctcttcagagagcaggtacagctttgagtaatgaacagcaagccagacgt
gactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgaaagagaattg
atgctacatgctgctgatgttgaagctctacaagctgccaaggaacaggcttcaaaaatg
gcatcagtccgtcagcatttggaagaaacaacccagaaagcagaatcacagttgttggaa
tgtaaagcatcttgggaggagagagagagagtgttaaaggatgaagtttccaagtgtgtg
tctcgctgtgaagatctagagaaacaaaacagattacttcatgatcagattgaaaaatta
agtgacaaggtagttgcctctgtgaaggagggtatacaaggaccattgaatgtatctctc
agtgaagaaggaaaatctcaagagcaaattttagaaattctcagatttatacgacgagaa
aaagaaattgctgaaactaggtttgaggtggctcaggttgagagtctgcgttatcgacaa
agggttgaacttttagaaagagagcttcaggaactgcaggatagtctaaacgctgaaagg
gagaaagtccaggtaactgcaaaaacaatagcccagcatgaagaactgatgaagaaaact
gaaacaatgaacgtagttatggagaccaataagatgctgagagaagaaaaggaaaggcta
gaacaggatctacagcagatgcaagcaaaggtgagaaaactggagttagatattttaccc
ttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaggcagagaagaag
ttattagaagaggatgtcaaacgttggaaagcacgtaaccagcatctagtaagccaacag
aaggatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcataccaag
cgtattcaacagttgactgaagaacttggaagacttaaagctgaaattgcaagatcaaat
gcatctttgactaacaaccagaacttaatccagagtctaagggaagatttaaataaagta
agaactgaaaaggaaaacatccagaaggacttagatgccaaaatagttgatatccaagaa
aaagtcaaaactattactcaggtcaagaaaattggacgtaggtacaagactcaatatgaa
gaacttaaagcacaacaggacaaggtcatggagacctcagctcagtcttctggagaccat
caggaacagcatgtctcagtccaggaaatgcaggagctcaaagaaaccctcagccaagct
gaaacaaagtcaaaatcactggagagccaagtagagaaccttcagaagacattgtctgaa
aaagagatggaagcaaagaatctccaagaacagactgtgcagctacagtctgaactttca
cgactccgtcaggatcttcaagatagaaccacacaggaggagcagcttagacagcagata
actgaaaaggaagaaaaaacaagaaaggctattgtagcagcaaaatcaaaaattgcacac
ttagctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagaaatggg
gccttagatcagcagaaagatgaattggatgtacgtatgactgctcttaagtcgcagtat
gaaggtcgaattagtcgcttggaaagagaactcagggagcatcaagagagacaccttgag
caaagagatgagccccaggaacctactaataaggtcccagaacagcagagacagatcaca
ctgaaaacaactccagcttctggtgaaagaggaattgccagcacatcagaaccaccaaca
gccaatatcaagccaactcctgttgtgtctactccaagtaaagtgacagctgcagctatg
gctggaaataagtcaacacccagggctagcatccgcccaatggttacacctgcaactgtt
acaaatcctactactactccaacagctacagtgatgcctactacacaggtggaatcacaa
gaagctatgcagtcagaagggcctgtggaacatgttccagtttttggaagcacaagtgga
tctgttcgttctactagtcctaatattcagccttctatctctcaacccattttaactgtt
cagcagcaaacccaggcaacagcttttgtgcaacctactcaacagagtcatcctcagatt
gagcctgcaaaccaagagctatccccaaacgtagtagaggttgttcagagttcaccaatt
gagcggccttctacttccacagcagtatttggcactgtttcagctaccccaagttcttct
ttgccaaagcgtacacgtgaagaagaagaagatagcaccatggaagcatcagaccaagta
tctgatgatacagtggaaatgcctgttccgaagaaattgaaaagtgttacaactgtagga
cctgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaagtatac
aaccaggattcccaagattctattggagaaggtgtcacccagggagattacactcctatg
gaagacagtgaggaaacctctcaatcccttcaaatagatcttggaccccttcagtcagat
cagcaaacaacttcatcccaggatgctcaaggcaaaggagatgatgtcattgttattgac
agtgatgatgaagaagaggatgatgatgaaaatgatggagaacatgaggattatgaggaa
gatgaagaagaggatgatgatgatgaagatgacaccgggatgggagatgagggtgaagat
agtaatgagggaactggtagtgcagatggcaatgatggatatgaagctgacgatgctgag
ggtggtgatgggactgatcctggtacagaaacagaagaaagtatgggtggaggcgaaagt
agtcagagagctgctgattctcaaaacagtggtgaaggaaatacaggtgctgcagagttg
tctttttcccgggagatttctagagaacagcagccatcatcagcatccgaaagacagacc
cctcgagcacctcagtcaccaagacgcccaccacatccacttcccccacgactgaccatt
catgctccaccgcaagaattgggaccaccagttcagaggattcagatgacccggaggcag
tctgtgggccgtgggcttcaactgactccaggaataggtggcatgcagcagcattttttt
gatgatgaagacagaacagttccaagtaccccaacccttgtggtgccacatcgtactgat
ggatttgctgaagcaattcattccccacaggttgctggtgttcctagatttcggtttgga
ccaccagaagatatgccacagacaagttctagtcactctgatcttggccagcttgcttct
caaggaggtttaggaatgtatgaaacacccctcttcctagctcacgaagaagagtctggt
ggccgaagtgttcccactacgcctctacaagtagcagccccagtgactgtatttaccgag
agtgccacttctgatgcctcagagcatgcctctcagtctgtcccaatggtgacaacatcc
actggcactttatccacgaccaatgaaacagcaacaggtgacgatggagatgaagtgttt
gtggaggcagaatctgaaggtattagttcagaggcaagcctagaaattgatagccagcag
gaagaagagcctgttcaggcatctgatgagtcggaccttccttccaccagccaagatcct
ccttccagctcttctgtagatactagtagtagtcaaccaaagcctttcagacgagtaaga
cttcagacaacattgagacaaggtgttcgtggccgtcagtttaacagacagagaggtgtc
agccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
