Trichechus manatus latirostris (Florida manatee): 101343962
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Entry
101343962 CDS
T05135
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
101343962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101343962
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
101343962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
101343962
NCBI-ProteinID:
XP_004379102
UniProt:
A0A2Y9DRX1
LinkDB
All DBs
Position
Unknown
AA seq
2210 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ
YFYPMVLKKKEELKEEEELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSGAS
AGGHITVGQQGLGSVKDPSNCGMPLTPPTSPEQVLIGESGGTQSAVSHLGSQEGGMITMH
SPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQVSTPTLEEEPANSPATWDFVDPTQR
VSCSCSRHKLLRRCAAGPNRPPTISQPGFSAGPSSSSSLPPPASSKHKTTERQEKGDKLQ
KRPLIPFHHRPSVAEELCMEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQM
NLNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLELQQLSTLDDRTV
LVGQRLPLMAEVSETALYCGIRPSNPESSDKRWHSYCLPPSDDAEFRPPELQGERCDAKM
EVNSESTALQRLLAQPNKRFKIWQDKQPQMQPLHFLDPLPLTQQPGDSLGEVNDPYTFED
GDIKYIFTANKKCKQGTEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATK
TDVRQDNAAGRAGSGSLTQVTDLAPSLHDLDNIFDNSDDDELGAVSPALRSSKMPTVGTE
DRPLGKDGRTAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVTALGMMES
PMVSMVPTQLTEFRMEVEDGLGSPKPEEIKDFSYVHKVPTFQPFVGSSMFAPLKILPSQC
LLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNVPSVGSLADPDYLNTPQMNT
PVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQG
SPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNI
KGADVGLYIPDSSNEDQYRCTCGFSAIVNRKLGYNSGLFLEDELDIFGKNSDIGQAAERR
LMLCQTTFLPQLEGARKSQEPPISLLLLLQNQHTQPFASLSFLDYISSNSRQALPCVSWS
YDRVQADNNDYWTECFTALEQGRQYVDNPTGGKVDEALVRSATAHSWPHSNVLDISMLSS
QDVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPL
PIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRD
LSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELVSEWFSQPWGSEENDNHSRLK
LYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAQGQATPGNAGPLASNSGSAVPPAGS
AFNPTSNGSSANPAASSSAPGSSVPPVSSSSSAPGINQMSTTSSSGFSGSVGGQNPSTGG
SSADRTQGNIGCGGDTEPGQSSAQPSQDGQESVTERERIGIPTEPDSADSQAYPPAVVIY
MVDPFTYTSEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDEQ
VFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLYSPPF
ILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCIVNIAL
PNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILLGECS
LQTISKQLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRSTALNM
QSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMDNDIG
ILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLALGYF
VSTARAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHPLDSK
TTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL
NT seq
6633 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcagcgaactgggtggcgaacggggcgagcctggaggattgtcactccaac
ctcttctcgctggctgagctcacgggaatcaaatggcgtaggtacaattttggagggcac
ggggactgtggacccataatttcagccccagcccaggatgatccaatcctgttgagtttc
atccgctgcctgcaagccaacttgctgtgtgtgtggcgtcgtgacgtcaaaccagactgc
aaagagttatggatattctggtggggagatgaacccaacctagtaggtgtaatacatcat
gaactgcaggttgtggaggaaggactctgggaaaatggcctttcctatgaatgcaggacg
ctgctcttcaaagcaatccacaatctgttagaaaggtgcctaatggataagaacttcgtc
aggattgggaaatggtttgttcgaccctatgaaaaggatgaaaagccggtcaacaaaagt
gagcatttgtcctgtgcttttacattctttcttcacggggaaagtaatgtatgcacgagt
gtggagattgcccaacaccagccaatttatctgatcaacgaggagcatatacacatggct
cagtcttcacctgcaccatttcaggtactggtaagtccttacggcttaaatggcacgcta
acaggccaagcatacaagatgtcagacccagccacccgtaagttgatcgaggaatggcag
tatttctacccaatggtgctgaaaaagaaagaggaactgaaagaagaagaagagttggga
tatgatgatgatttccctgtggcagttgaagtaattgttggtggtgtgcggatggtttac
ccatcggctttcgttttgatctcgcagaatgacattccagttcctcagagcggagccagt
gctggaggccatattacagttgggcagcagggtcttgggagtgtgaaggacccaagtaac
tgtgggatgcctcttaccccccccacctctccagaacaggttctcataggtgagagtgga
ggtacgcagagtgctgtcagtcacctaggttcccaagaagggggaatgataactatgcac
agtccaaagagatcggggaagattcctccaaaactccacaatcatatggtccatcgagtc
tggaaggaatgcatcctcaacagaacccagtccaagaggagccaagtgtcaactccaact
cttgaagaagagcctgctaacagtcctgctacttgggattttgtggatccaacccaaaga
gttagctgttcttgttccaggcataaacttttaagacgttgcgcagcaggacccaaccga
cctcccacaatatctcaaccagggttcagtgcaggaccatcatcatcttcatctttgcca
cctcctgcttcttctaagcacaaaacaacagaacgacaggaaaaaggagacaagttgcaa
aagagacccttgataccttttcaccataggccctctgtggctgaagagttatgcatggaa
caagatacaccaggacagaagctagggttggcagggatagactcctccttagaggtgtct
agcagtaggaagtatgataagcaaatggccgtgccttccagaaatacaagcaagcaaatg
aatctgaatcctatggattcacctcattcccctatttcccctctgccgccaacactcagc
cctcagcctcgaggtcaggaaacggagagtttggacccaccgtctgtccctgtgaatcca
gccctctatggaaatggcctagagctccagcagttgtctactctggatgacagaactgtc
ctcgtaggccaaagactgcctctgatggcagaggtcagtgagacagccttatattgtggg
atcaggccctcaaacccggagtcatcagataagcggtggcacagttactgtcttccaccc
agtgatgatgctgagttcaggcctccagagctccagggtgagaggtgtgatgccaaaatg
gaggtcaactcagagagcactgcactgcaaagactcctagcacaacctaacaaacggttt
aaaatctggcaagacaagcagccccagatgcagccactccacttccttgatccattgcct
ctaacccagcaacctggagacagtttgggagaagtcaatgacccatatacctttgaggac
ggtgacataaaatacatctttacagcaaacaagaaatgcaagcaagggacggagaaagat
tccctgaaaaagaataagtcagaggatggatttggtaccaaggatgtcactacaccaggt
cattccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctactaaa
acagatgtccggcaggataatgctgctggcagagctggctccggtagtcttacgcaggtg
acagatttggcaccttccctgcatgacttagacaacatctttgataattctgatgacgac
gaacttggggctgtgtcacctgcactgcggtcatcaaaaatgcctacggttgggacagaa
gaccgacctcttggaaaggatggaaggactgccgttccttacccaccaacagttgcagac
ctgcaaaggatgttccccacccctccatctttggaacagcaccctgccttttctcctgtg
atgaattataaagatggaatcagttcagagacagtgacggcattaggcatgatggagagc
ccgatggtcagcatggttcccacacagctcacagaattcagaatggaagtggaagatggg
ttaggaagtcccaagccagaggagataaaggacttttcgtatgtgcacaaagttccaacc
ttccaaccttttgtgggatcctccatgtttgctccactgaagatattgccgagccagtgc
ctgctacctctgaagatccccgatgcctgtctgtttcggccttcatgggcaattcctcct
aaaattgaacaactgcccatgccacctgcagccactttcattagagatggctacaataat
gtgcctagtgtcgggagcctagcagacccagactatctgaacacaccacagatgaacaca
ccagtgacgctcaacagtgccgccccagccagcaacagtggggcaggagtcttgccatct
ccagcaacccctcgcttctctgtccccacaccacgaacccccaggaccccaagaactccc
agaggtgggggcactgccagtggtcaagggtctgtgaaatatgacagcaccgaccagggg
tcaccagcctctaccccctctaccacgcggccccttaactctgtggagcctgccaccatg
cagccaatccctgaagcccacagtctctatgtcaccttgattctctccgattctgtgatg
aatatctttaaagacagaaactttgacagctgttgcatctgtgcctgcaacatgaacatc
aaaggggcagacgtcgggctctacatccccgactcttccaacgaggaccagtaccgctgc
acctgtggttttagtgcgatcgtgaatcgcaaacttggctacaactcgggactcttcctt
gaagatgagttggatatctttgggaagaattctgatatcggtcaggctgcggagaggcgc
ttaatgctgtgtcagaccaccttccttcctcagctggaaggagcccgaaaatcccaggag
ccacctatcagccttctcctcctcctgcagaatcaacacacacagccttttgcctccctg
agtttcctggactacatttcctccaacagtcgccaggctcttccctgtgtgagctggagc
tacgaccgggtgcaggccgacaacaacgattactggaccgagtgcttcaccgcgctggag
cagggccggcagtatgtggacaatcccacgggtggcaaagtggacgaggctctggtcaga
agtgccactgcccactcatggcctcatagcaacgtgctggacatcagtatgctctcttcc
caagacgtggtccgcatgctgctgtccctgcagccctttctccaggatgccatccagaag
aagcgcacaggccggacctgggagaacatccagcacgtgcaggggccactcacctggcag
cagttccacaaaatggcaggacggggaacctacggttcagaagagtcccctgagcctttg
cccatcccgactctgctggtaggctatgacaaggacttcctcaccatctcgcccttctcc
ttgccattttgggagaggctgttgttggacccatacgggggccaccgtgatgttgcctat
attgtggtgtgtccagaaaatgaggccttgctcgaaggagccaaaactttcttcagggac
ttgagtgctgtgtatgagatgtgtaggcttgggcagcacaaacccatctgcaaagtgctc
cgagacgggatcatgcgtgtggggaagaccgtggcacagaagctgaccgatgagctcgtg
agcgaatggttcagccagccctggggcagcgaggagaatgacaatcattccagactcaaa
ctgtacgcgcaagtttgccgccatcacctagcaccttatttagccactctgcagctggac
agcagcctgttgataccacctaaataccagaccccaccagcagcacagggacaagctaca
cctgggaatgctgggcctttagcttcaaattcaggatcagcagtgcccccagctggcagt
gcatttaatcccacctccaatggtagttctgcgaaccctgcagcaagtagttctgcacct
ggctcctcggtgccaccggtctcatcatcttcctctgcccccggcatcaaccagatgagc
actacctcttcttcgggattcagtggtagtgttggagggcagaaccccagcacagggggc
agttctgcagacagaacgcaagggaacattggctgtgggggagacaccgagcctgggcag
agctccgctcagccctcacaggatggacaagaaagtgttacagaaagggagagaataggc
atccccacggaacctgactctgcagacagccaagcgtatcctccagctgtggtcatttac
atggtggacccgttcacctacacctcagaggaagactccacttccggaaacttttggctg
ttgagcttgatgcgctgctacacagagatgctggataatttacctgagcatatgagaaat
tctttcattctccagattgtgccttgccagtacatgctgcagacaatgaaggatgagcaa
gttttctacattcagtacttgaagtccatggcattttctgtgtactgccagtgcaggcgc
cctctgcctacacagatccacatcaaatccctcacgggatttgggcctgcagccagcatt
gagatgaccctcaagaacccggagcgtcccagcccaatccagctttactcccctcccttt
atactggccccaatcaaagacaagcagacagagctgggagagacgtttggtgaggccagc
cagaagtacaatgtgctctttgtgggctactgtctgtctcacgaccagcgctggcttctg
gcatcctgcactgacctccacggggagttattagagacctgcattgtaaatattgcttta
ccaaacagatcacggaggagtaaagtatctgcacgtaaaattggactacagaagttatgg
gaatggtgcatagggattgtccaaatgacatctctaccctggagagttgtaattgggcgg
ctaggacgtctgggccatggggagcttaaagattggagtatcctccttggagaatgttca
ctacagacaatcagcaaacagctcaaggatgtgtgccggatgtgtggaatctctgccgca
gactctccttctatcctcagtgcctgcctggttgctatggagccccagggctcctttgtc
gtgatgccagatgctgtcacaatgggctctgtttttggccgaagtactgcactgaacatg
cagtcatctcagctcaacacaccgcaagatgcctcctgtacacacatcttggtgttcccc
acatcgtcaaccatccaggtggctccagccaactatcccaatgaagatgggtttagcccc
aacaatgacgatatgtttgttgaccttccattcccggatgatatggacaatgatattggc
atactgatgactgggaacctccattcatctcccaactcctccccagtcccctccccaggc
tctccttctggcatcggtgtgggctctcatttccagcacagtcggagccagggtgagcgt
ctcctctccagagaagcccccgaggagctcaagcagcagccgctggccctcggctatttt
gtatcaactgccagagctgagaacctcccccagtggttttggtcttcgtgtccccaggct
cagaaccagtgcccactcttcctaaaggcttcgctgcatcaccacatttcggtagcacag
acggatgaacttctccctgccaggaattctcagcgggttccacaccctctggactccaaa
accacatctgatgttttaaggtttgttctggagcagtacaatgctctgtcctggctcaca
tgcaacccagccacccaggaccgtacttcctgcctccctgtccacttcgtggtgctcact
cagttgtacaacgccatcatgaatatactttaa
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integrated database retrieval system
