Trichechus manatus latirostris (Florida manatee): 101344111
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Entry
101344111 CDS
T05135
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04010
MAPK signaling pathway
tmu04020
Calcium signaling pathway
tmu04713
Circadian entrainment
tmu04925
Aldosterone synthesis and secretion
tmu04927
Cortisol synthesis and secretion
tmu04929
GnRH secretion
tmu04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101344111
04020 Calcium signaling pathway
101344111
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101344111
04925 Aldosterone synthesis and secretion
101344111
04927 Cortisol synthesis and secretion
101344111
09159 Environmental adaptation
04713 Circadian entrainment
101344111
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
101344111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101344111
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101344111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101344111
NCBI-ProteinID:
XP_023584309
UniProt:
A0A2Y9QY19
LinkDB
All DBs
Position
Unknown
AA seq
2355 aa
AA seq
DB search
MQALVAGVQGPVVGVPTWGENLGRGCHEGPGLGLLTEPQAGQGALSFGAPCSGGTRDFRG
WHSGEEGLCLEGDQACGSGGALGAGPGSLVPSSCRGSLTRTPARTWFEHVSMLVILLNCV
TLGMFRPCEDVECRSERCNILEAFDDFIFAFFAVEMVIKMIALGLFGQKCYLGDTWNRLD
FFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLL
LCFFVFFIFGIVGVQLWAGLLRNRCFLDSAFARNDNLSFLRPYYQPEEGEENPFICSSHR
DNGMQKCSHIPSRRELRRECTLGWEAFTQPPAEGAGGASRNGCINWNQYYNVCRSGGANP
HNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLC
LVVIATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHVVRKVRRR
GLRLYARWQSRWRKRADSDAALPGEGPGRRQGRAGRRIASIHHLVYHHHHHXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADCHVEGPQERARVAH
AAATAAAGLKLASGVGVMNYPTILPSGAAGKGIASPGPKGPPGTRVHSPTGLSSPDPYEK
IQHLVGEHGLGRTPSCLSGLSVPCPLPSPQAGTLACELKSCPYCASALDDPELEVSSPES
GDSDNNSVYEFTQDVQRGDHRDPLQPSTAETPGQGGGPQQRAHGPAVGELGRLGRLWAAF
SGKLRRIVDSKYFNRGIMVAILVNTLSMGVEYHEQPDELTSALEISNVVFTSLFALEMLL
KLLACGPLGYIRNPYNIFDGVIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALR
RQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLQTDTGDTVPDRKNFDSLLW
AIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEG
DANRSDTDEDKTSARFEEDLDKLRELRAAEMKMYSLAMTPNGHLEGQGSLPPPLIMRTAA
TPMPTPKGSPHLDSAPGLLESRRGSSGSVDPQLGDQKSLSSLRSSPCAHWGPNSTWSSRR
SSWNSLGRAPSLKRRSQCGERVSLLSGEGRGSTDDEAEDGRPGARAAPGARATPLRRTES
LDHRSTLDLRPPRPVALLPAKFHNCNGQTVALPSEFFLRIDSHKEDPADFEDDMEDSCCF
RLHAVLDRYKPQWCRRREPWALYIFSPQNRFRVVCQKVIAHKMFDHVVLVFIFLNCITIA
LERPDIDPGSTERVFLSVSNYIFTAIFVVEMMVKVVALGLVSGEHAYLQSSWNVLDGLLV
LVSLVDIVVAMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGN
IVLICCAFFIIFGILGVQLFKGKFYYCEGADTRNISTKAECRAARYRWVRRKYNFDNLGQ
ALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQHQEAEEARRREEKRLRRLERRRRSTFPNPEAQRRPYYADYAPTRRAIHS
LCTSHYLDLFITFIIGVNVITMSMEHYDQPKSLDEALKYCNYIFTIVFVVEAVLKLVAFG
FRRFFKDRWNQLDLAIVLLSIVGITLEEIEMSAALPVNPTIIRIMRVLRIARVLKLLKMA
VGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLDCSEDNPCEGLSRHATFT
NFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPVISPVYFVTFVLVAQFVLV
NVVVAVLMKHLEESNKEAREDAELDAELELEMAHSPPAATTMPEGLGTGPEAPSLLVVRK
VSVSRMLSLPNDSYMFRPVVPAAPQPLQEVEMETYTGAAALGTVPPASSPREPRATLQVP
PETMPMPTPATPSPARSSDTLRAPSPRAAPRSPGLSRLLCRQEAVRTDSLEGQVDGCRDS
TSGPGDSGEKAAARPALLGAPLRTPPRSPRPVSTRTRGHTFGQPCVASRPPAADEAADLA
DEEVRCITSAARPWPPEPEPHSPKASLAARGGLRRLCSADGWSCRAGPGRADGQRQPGPE
PGGDGRRDEAPEAEPALGARRKKKMSPPCISIDPPAEDEGAGRPPAAEGSSTTLRRRTPS
CEVPLGLAVPHRDPLEPTEGPVTGLDPSGKGERWGQASARAEHLTVPNFVFEPLDVGAPT
GDPFLDSGQGVAPEPCVFSLGATTPLEPPNIEPPAPSSDNLEKGQEVLMVSQSPPKKPGS
PPGTPAPDDSVEEPV
NT seq
7068 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcattggtggcgggtgtccaagggcctgtggttggggtacccacctggggtgag
aatttggggagagggtgtcatgaggggcctggcctgggtctcctcactgagccacaagcg
ggtcagggggctctgtcctttggtgctccgtgctccggcggcacgcgggactttcggggt
tggcactcgggagaggagggtctctgcctcgagggggaccaggcctgtggaagtggcggg
gcgctgggggcaggtcctgggtccctcgtaccttcctcttgccgtggatccttaactcgc
acgcccgcccgcacgtggtttgagcacgtcagcatgctggtcatcctgctcaattgcgtg
accctgggcatgttccggccctgcgaggacgtcgagtgccgctcagagcgctgcaacatc
ctggaggccttcgatgacttcatctttgccttcttcgcggtggagatggtcatcaagatg
attgccctggggctgtttgggcagaagtgctaccttggcgacacctggaacaggctggat
ttcttcatcgtcatggcgggcatgatggagtactccctggatggacacaacgtgagcctc
tccgccattcgaaccgtgcgcgtgctgcggccgctccgcgccatcaaccgcgtgcccagc
atgcgcatcctggtcacgctgctgctggacacgctgcccatgctcgggaacgtcctcctg
ctctgcttcttcgtcttcttcatcttcggcatcgtcggcgtacagctctgggccggcctg
ctgcgcaaccgctgcttcctggacagcgccttcgccaggaacgacaacctgagcttcctg
cggccatactaccagccggaggagggcgaggagaaccccttcatctgctcctcgcaccgc
gacaacggcatgcagaagtgctcgcacatccccagccgccgcgagctgcgccgtgagtgc
acgctgggctgggaggccttcacgcagccgcccgccgagggcgcagggggcgccagccgc
aacggctgcatcaactggaaccagtactacaacgtgtgccgctccgggggcgctaacccc
cacaacggtgccatcaactttgacaacatcggctacgcctggatcgccatcttccaggta
atcacgctggagggctgggtagacatcatgtactacgtcatggacgctcactccttctac
aacttcatctactttatcctgctcatcatcgtgggctccttcttcatgatcaacctgtgc
ctggtggtgatcgccacacagttttcggagaccaagcagcgggagaaccagcttatgcgc
gagcagcgagcccgctacctgtccaatgacagcaccctggccagcttctcggagcccggc
agctgctacgaagagctgctgaagtacgtgggccacgtggtacggaaggtacggcggcgt
ggcctgcgcctctatgcccgctggcagagccgctggcgcaagcgagcggactcagacgcc
gcgctccccggcgagggccccgggcggcggcagggccgggcaggccggcgcatagcttcc
atccatcacctggtctaccaccaccaccaccatnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnncgccgactgccacgtggaggggccacaggagcgtgcccgggtggcccac
gccgcagccaccgccgccgccggcctcaagctggcctcgggtgtgggtgtcatgaactac
cccaccatcctgccctcgggggcggccggcaagggcattgccagccctgggcccaagggg
ccgccaggcactagggtgcacagccccacgggcttgagcagccccgacccctacgagaag
atccagcacttggtcggggagcatggactgggccggacccccagctgcctgtcgggcctg
agcgtgccctgcccgctgcccagcccccaggcaggcacgctggcctgtgagctcaagagc
tgcccgtactgcgccagtgccctggacgaccccgagctcgaggtcagcagccccgagagc
ggcgactcggacaacaacagcgtctacgagttcacacaagatgtacagcgtggtgaccac
cgtgatcccctgcagccgtccactgccgagacacccggccagggtggcgggcctcagcag
cgggcacacgggccagcggtgggtgagctgggcaggctgggccgcctctgggccgccttc
agcggtaagctgcggcgcatcgtggacagcaagtacttcaaccgtggaatcatggtggcc
atcctggtcaacacgctgagcatgggtgtcgagtaccacgagcagcccgacgagctgacc
agtgccctggagatcagtaacgtggtcttcaccagcctcttcgccctggagatgctgctg
aagctgctggcctgcgggccgctgggttacatccgcaacccctataacatcttcgacggc
gtcatcgtggtcatcagtgtctgggaaatcatcgggcaggcggacggcggcctgtcggtg
ctgcggaccttccggctgctgcgggtgctgaagctggtgcgcttcatgcccgcactgcgg
cgtcagctggtggtgctcatgaagaccatggacaacgtggccaccttctgcatgctgctc
atgctcttcatcttcatcttcagcatcctgggcatgcacctgtttggctgcaagttcagt
ctgcagacggacacgggagacactgtccccgacaggaagaacttcgactcgctgctatgg
gccatcgtcacggtgtttcagatcctcacccaagaggactggaacgtggtcctctacaac
ggcatggcctccacctcctcctgggctgccctctactttgtggcactgatgaccttcggc
aactacgtgctcttcaacctgctggtggccatcctggtggagggtttccaggcggagggc
gatgccaacaggtctgacaccgacgaagacaagacgtcagcgcgcttcgaggaggacttg
gacaagctcagggagctgcgggccgcagagatgaagatgtattccctggcgatgaccccc
aacgggcacctggagggccagggcagcctgccccctcccctcatcatgcgcacagcggcc
acgcccatgcccacccccaaggggtccccccacctggactcagcccccgggctgctggaa
tctcggcgtggcagcagcggctctgtggatccccagctgggagaccagaagtctctgtcc
agcctccgcagctcgccctgtgcccactggggccccaacagcacctggagcagccggcgc
tcgagctggaacagcctgggccgcgcgcccagcctcaagcgccggagccagtgcggcgag
cgggtgtcgctcctgtcgggcgagggcaggggcagcacggacgatgaggccgaggatggc
aggcccggcgcaagggctgccccgggggcacgtgccaccccgctgcggcgcactgagtct
ctggaccacagaagcacactggacctgcgtcccccacggccagtcgccctcttgcccgcc
aagttccacaactgcaatgggcagacggtggccctgcccagtgagttcttcctgcgcatc
gacagccacaaggaggacccggccgacttcgaagacgacatggaggacagctgctgcttc
cgcctccacgcagtgctggaccgctacaagccccagtggtgccgccgccgcgagccctgg
gcgctctacatcttctcgccgcagaaccggttccgcgtcgtctgccagaaagtcatcgct
cacaagatgtttgaccacgtggtgctggtcttcatcttcctcaactgcatcaccatcgcc
ctggagcggcccgacatcgaccccggtagcactgagcgcgtcttcctcagcgtctccaac
tacatcttcacagcgatcttcgtggtcgagatgatggtgaaggtggtggccctgggcctg
gtatcgggcgagcatgcctacttgcaaagcagctggaacgtgctggacgggctgctggtc
ctggtgtccctggttgacatcgtggtggccatggcctccgccggcggcgccaagatcctg
ggcgtactgcgggtgctgcggctgctgcggacgctgagaccgctcagggtcatcagccgc
gccccaggcctcaagctggtggtggagacgctcatctcctcgctcagacctatcgggaac
atcgtcctcatctgctgcgccttcttcatcatcttcggcatcctgggcgtgcagctcttc
aaggggaagttctactactgcgagggcgccgacaccaggaacatctccaccaaggccgag
tgccgagctgcccgctaccgctgggtgcggcgcaagtacaactttgacaacctgggccag
gccctgatgtcgctgtttgtgctctcgtccaaggacggctgggtgaacatcatgtacgac
gggctggacgctgtgggcattgaccagcagcccgtgcagaaccacaacccctggatgctg
ctgtacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggc
gtcgtggtggagaacttccacaagtgccggcagcaccaggaggccgaggaggcgcggcgg
cgcgaggagaagcggctgcggcgcctggagcggaggcgacggagcacgttccccaaccca
gaggcccagcgccggccctactacgctgactacgcgcccacccgccgggcgatccactca
ctctgcaccagtcactacctggaccttttcatcaccttcatcattggggtcaacgtcatc
actatgtccatggagcactacgaccagcccaagtcactagacgaggccctcaagtactgt
aactacatattcaccatcgtcttcgtggtggaggccgtgctgaagctggtggcgtttggg
ttccggcggttcttcaaggacaggtggaaccagctggacctggccatagtgctgctgtcc
atcgtgggcatcacgctggaggagattgagatgagcgcagcgctgcccgtcaaccccacc
atcatccgcatcatgcgcgtgctccgcatcgcccgggtgttgaagctgctcaagatggcc
gtcggcatgcgggcattgctggacacagtggttcaagccctgccccaggtagggaacctt
ggcctacttttcatgctgctgttttttatctatgctgccctgggagtggagctgtttggg
aggctagactgtagcgaggacaacccctgtgagggcctgagcagacacgccaccttcacc
aacttcggcatggccttcctgacgctgttccgtgtgtccacgggtgacaactggaacggg
atcatgaaggacacgctccgagagtgtgcgcgtgaggacaagcactgcctcagctacctg
cctgtcatctctcctgtctacttcgtcaccttcgtgctggtcgcccagttcgtgctggtc
aacgtggtggtggccgtgctcatgaagcacctggaggagagcaacaaggaggcacgcgag
gacgccgagctggacgctgagctggagctggagatggcccacagcccgcccgccgccacc
accatgccagagggcctgggcaccggcccagaggccccgagcttgctagtggtgcgtaag
gtgtccgtgtcccgcatgctctcgctgcccaacgacagctacatgttccggcctgtggtg
cccgccgcccctcagccgctgcaggaggtggagatggagacctacacgggagctgcagct
ttgggtactgttccccccgccagctcgcccagggagccccgtgccaccctccaggtgccg
cctgagacgatgcccatgccgaccccagccactccttccccagcgaggtccagtgacacc
ctgcgggccccctccccacgagccgcaccccgctcccctggccttagccggctgctctgc
agacaggaggcagtccgcacagactccctggaaggacaggtagacggctgccgggacagc
acctcgggaccaggggactctggggagaaggcggcagccaggccggcactgctgggggcc
cccctgcggaccccgccccgctccccgaggcccgtgagcacgcgcacccgcgggcacacg
tttgggcagccctgcgtggccagccggccgccggccgctgacgaggctgcggacctggct
gatgaggaggtgcggtgcatcaccagcgcggcgcggccctggcctcccgagcccgagccc
cacagccccaaggcctccctggccgcccgcgggggcctacgtcgactctgcagtgccgat
ggctggagctgccgggcggggccgggccgggcggacgggcagaggcagccgggcccagag
ccaggcggggatggcaggcgcgacgaggcccccgaggccgagccggccctgggcgcgcgc
cgcaagaagaagatgagccccccctgcatctccatcgaccctcctgcggaggatgagggc
gccggccggccccccgcggccgagggcagcagcaccaccctgcggcggagaaccccatcc
tgtgaggtcccactgggcctggccgtcccccacagggaccccctggagcccacagagggc
ccagtgaccgggctggacccttcgggcaagggagagcggtggggccaggcctcagcccgg
gcagagcatctgacggtcccgaactttgtctttgagccattggatgtgggggcccccact
ggggacccctttttggacagtggccagggtgtggccccagaaccttgtgttttctccttg
ggggccacgacgcctctggaaccccccaatatagagcctcctgcgccctccagtgacaac
ctagagaaagggcaggaggtactcatggtttcccagagccccccaaagaaaccagggtcc
cccccaggcacccctgccccagatgacagcgtagaggagcctgtgtag
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integrated database retrieval system
