Trichechus manatus latirostris (Florida manatee): 101344268
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Entry
101344268 CDS
T05135
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03250
Viral life cycle - HIV-1
tmu04623
Cytosolic DNA-sensing pathway
tmu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101344268
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101344268
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101344268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101344268
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101344268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
SAM_Ste50p
PDEase_I
Motif
Other DBs
NCBI-GeneID:
101344268
NCBI-ProteinID:
XP_004370425
UniProt:
A0A2Y9DAI2
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MQNADSEQPFKRPRRDGSPRTPPSAHTAAAEKSPGHELHPDHKTWCPEQVCAFLRRSGIS
DPLLQTRFRENKITGSLLPFLDESLLENLGVSSLGERKKLLHHIQRLSETQVDTVKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYVFPGASHNRFEHSLGVGYLAGCLVR
ALHEKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWKHEEGSVKM
FEHLVDSNGLRDVMQHYGLIPEEDICFIKEQITGPLESPTKSLVWTYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNKKHICTREKEVGNLY
DMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPYIEITGAQGKKFHISTAIDDMEAFT
KLTDNIFLEILYSTDPKLDIAREILKKIESRKLYKYVGQTQPMGQEKIKKENYESLPQEV
ADAKPGPDVLLQAELKAEDFIVDVINMDYGMEDKNPIDHVRFYCKNDPNKAIRITKDQVS
QLLPERFAEQLIRVYCKKTDNKSLYAAQQHFVQWCVIRGFTKPQDGDVIAPLITPRKQQW
NCPDLAQSSTHHQEAPKPRVRLFKD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgctgactccgagcagccgttcaagcggccccgacgcgatggcagcccaaga
accccgccaagcgcccacactgcagcggcagagaaatccccgggccacgaactccacccc
gaccacaagacctggtgccctgagcaggtgtgcgcctttctaaggcgcagtggcatcagt
gaccccctgctgcagacacgtttccgagaaaataaaatcacgggttcactactgcccttt
cttgatgagtctcttctggaaaatcttggagttagctccttgggggagagaaagaagctg
cttcatcatatccaaagactaagtgaaactcaagttgatacagtgaaggttattaatgat
cctatccatggccacattgagctgcaccctctcctcatccgaatcattgacacacctcaa
tttcagcggcttcgatatattaaacagttgggaggcagttactatgtttttccaggagct
tcacacaaccgatttgaacatagtctgggggtagggtacctagcaggatgtctagttcgt
gcactgcatgaaaaacaaccggagctgcagataagtgagcgagatatgctctgtgttcag
atcgctgggctttgtcacgatcttggtcatggaccattttctcacatgtttgatggaaga
tttattccacttgcccgccctgaggtaaaatggaagcacgaagagggctcagtcaagatg
tttgagcacctagtcgattctaatggactcagagatgtcatgcaacactatggtctcatc
cctgaagaagatatttgttttatcaaggaacagattacgggaccacttgaatccccaaca
aagtctttggtttggacatataaagggcgtcccaaagagaaaagcttcctctatgagata
gtggctaataaaagaaatggcattgatgtggacaaatgggattattttgccagagactgc
catcatctcggaatccaaaataattttgattacaagcgctttattaagtttgcccgtgtc
tgtgaagtagataacaagaagcatatttgtactagagaaaaggaagttgggaatctgtat
gatatgttccacacgcgcaactgcttacaccgcagagcttaccagcacaaagttggcaac
atcattgagacaatgattacagatgctttcctcaaagcagacccctacatagagattaca
ggtgctcaaggcaaaaagtttcacatttctacagcaattgatgacatggaagccttcact
aaactaacagataacatttttctagagattttatactctactgatcccaaattggacatt
gcacgagagattttaaaaaaaatcgaaagccgaaaactatacaagtatgtgggtcagact
cagccaatgggacaagaaaagattaaaaaggagaactatgaatctcttccacaagaggtt
gctgatgctaaacctggtcctgatgtattgctgcaagctgaactgaaggctgaagatttc
atagtggatgttatcaacatggattacggaatggaagacaagaatcctattgatcacgtt
cgcttctattgtaagaatgatcccaacaaagcaatcagaattactaaagatcaggtttca
caacttctgcctgagagatttgcagagcagctgattcgagtgtactgtaagaagaccgat
aacaagagtttgtatgcggcacaacaacactttgttcagtggtgcgtaatcagaggtttc
accaagccacaggatggcgatgttatagccccactcataacacctcgaaaacagcagtgg
aattgcccagatttagcccagagttcaactcatcaccaagaagcgcccaaaccaagagtc
cggctttttaaggattga
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