Trichechus manatus latirostris (Florida manatee): 101344298
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Entry
101344298 CDS
T05135
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03082
ATP-dependent chromatin remodeling
tmu04714
Thermogenesis
tmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101344298
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101344298
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101344298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101344298
03021 Transcription machinery [BR:
tmu03021
]
101344298
03036 Chromosome and associated proteins [BR:
tmu03036
]
101344298
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Helix-turn-helix
ARID
101344298
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101344298
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101344298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
101344298
NCBI-ProteinID:
XP_004377131
UniProt:
A0A2Y9DM72
LinkDB
All DBs
Position
Unknown
AA seq
2276 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAERGEMKAAAGQESEGPTVG
PPQPLGKELQDGAESNGGGGGGAGSGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGG
GSSDGVGAPPHSAAAALPPPAYGFGQPYGRSQSAVAAAAAAVFHQQHGGQQSPGLAALQS
GGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPGPGAAA
ATGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA
RGYQGYPGGDYGGGPQDGSAGKGPADMASQCWGAAAAAAAAASGGAQQRSHHAPMSPGSS
GGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPTGPQQGHGYPGQPYGSQTP
QRYPMTMQARAQGTMGSLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQQPYSQ
QPPSQTPHAQPSYQQQPQSQPPQLSSSQPPYSQQPSQPPHQQSPTPYPSQQSTTQQHPQS
QPPYSQPQTQSPYQQQQPPQPASSTLSQQATYPQPQSQQSQQTAYSQQRFPPPQELSQDS
FGSQASSVPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGIS
SSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPR
PPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQMHTGMGS
YQQNSMGSYGPQGAQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAGGQMHGQPGI
PPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAANS
IQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGMAASPEM
MGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRY
LAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSS
AASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQGPQTP
QSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQKRNSMTP
NPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPG
LGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGMYSPSRYPPQ
QQQQQQRHDSYGNQFSTQGTPSGSPYPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEM
YSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYSNAYPATAAAATERRPA
GGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASSEVAQQGTMWQGRNDMTYNY
ANRQSAGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPTYGPSAPVPPMTRPP
PSNYQPPPSMQNHIPQVSSPAPLSRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPT
PVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWAL
DTINILLYDDNSIMTFSLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPG
RFSKASSPAPVEGEEEEDLLGPKLEEAEEEEVVENDEEMAFSSKDKPASENSEEKLISKF
DKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLPTR
PYVPCPPAPRKHVTAAEGMPGTTEQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDGAKS
AEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIR
SLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWW
WDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPN
AVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVV
LLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTSVD
MMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6831 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggtaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcagcg
gccgagcgcggggaaatgaaggcagccgccgggcaggagagcgagggccccactgtgggg
ccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaatgggggtggcggc
ggcggagccggcagcggcgggcccggcgcggagccggacctgaagaactcgaatgggaac
gcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggcggcggtggc
ggcagcagtgacggggtgggggcgcctcctcactcggccgcggccgccttgccgccccca
gcctacggcttcgggcagccctacggtaggagtcagtccgccgtcgctgccgccgcggcc
gccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcgctgcagagc
ggcggcggcggcgggggcctggagccctacgcggggccccagcagaactcgcacgaccac
ggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctaccccccgccc
ccccaggcctacgcgctgagctccccgagaggcggcactccgggccccggcgcggcggcg
gccaccggctccaagccgcctccctcctccagcgcctcggcctcctcgtcgtcttcgtcc
ttcgctcagcagcgcttcggggccatggggggaggcggcccctcagcggccggcggggga
accccccagcctaccgccacccccaccctcaaccaactgctcacgtcgcccagctcggcc
cgcggctaccagggctaccctgggggcgactacggcggcgggccccaggacgggagcgcc
ggcaagggcccggcggacatggcctctcagtgctggggggccgcggcggcggcggcggcg
gccgcctcgggaggggcccaacaaaggagccaccacgcgcccatgagcccagggagcagc
ggcggcggggggcagccgctcgcccggaccccgcagccatccagtccaatggatcagatg
ggcaagatgagacctcagccatatggtgggactaatccatactcgcaacaacagggacct
ccgacaggaccgcagcaaggacatgggtacccagggcagccatatgggtcccagacccca
cagcggtatccgatgaccatgcaggcccgggcgcagggtaccatgggcagcctctcttat
gcacaacagattcctccttatggacaacaaggccccagcgggtatggtcagcagggccag
actccatattacaaccagcaaagtcctcacccccagcagcagcagcaaccctactcccag
cagccaccatcccagacccctcatgcccaaccttcatatcagcagcagccgcagtctcag
ccaccacagctctcgtcttctcagcctccatactcccaacagccatcccagcctccgcat
cagcagtccccaactccatacccctcccagcagtccacgacacagcagcacccccagagc
cagcccccctactcgcagccacagacacagtctccctaccagcagcagcaacctccgcag
ccagcatcctcgacgctctcccagcaggctacataccctcagccccagtctcagcagtca
caacaaactgcctattcccagcagcgcttccctccaccacaggagttatctcaagattca
tttgggtctcaggcatcctcagtcccctcaatgacctccagtaagggagggcaagaagat
atgaacttgagccttcagtcaagaccttcgagcttacctgatctgtctggttcaatagac
gatctccccatggggacagaaggagctctgagccctggagtgagcacatcagggatttcc
agcagccaaggagagcagagtaatccagctcagtctcctttctcgcctcatacctcccct
cacctgcctggcatccgaggcccctccccatcccctgttggctctcccgccagtgttgct
cagtctcgctcaggaccactctcgcctgctgcagtgccaggcaaccagatgccacctcgg
ccacccagtggccagtccgacagcatcatgcatccttccatgaaccaatcaagcattgcc
caagatcgaggttacatgcagaggaatccccagatgccccagtacagttccccccaacct
ggctcagccttatctccacgtcagccttctggaggacagatgcacacaggcatgggctcc
taccagcagaactccatggggagctacggtccccagggggctcagtacggcccacaagga
ggctaccccaggcagccaaactataatgccttgcctaatgccaactaccctagtgcaggc
atggctggaagcatgaaccctatgggtgctggaggtcaaatgcatgggcagcctggcatc
ccaccttacggcacccttcctccagggagaatgagtcacgcctccatgggcaaccggcct
tatggccctaatatggccaatatgccacctcaggttgggtcagggatgtgtcccccaccg
gggggcatgaaccggaaaactcaagaaactgctgttgccatgcatgttgctgccaactct
atccaaaacaggccaccaggctaccctaacatgaatcaagggggcatgatgggaactgga
cctccctatggacaagggattaatagtatggctggcatgatcaaccctcagggaccccca
tatcccatgggtggaaccatggccaacaattcagcagggatggcagcaagtccagagatg
atgggccttggcgatgtcaagttaaccccagccaccaaaatgaacaataaggcagatggg
acacccaagacagaatccaaatccaagaaatccagttcctctactacaaccaatgagaag
atcaccaagttgtatgagctgggtggtgagcctgagaggaagatgtgggtggaccgttat
ctggccttcacagaagagaaggccatgggcatgacaaatctgcctgctgtgggcaggaaa
cctctggacctctatcgcctctatgtgtctgtgaaggagattggtggattgactcaggtc
aacaagaacaaaaaatggcgggaacttgcaaccaacctcaatgtgggcacctcaagcagt
gctgccagctccctgaaaaagcagtatatccagtgtctctatgcctttgagtgcaagatt
gaacggggagaagaccctcccccagacatctttgcagctgctgattccaagaagtcccag
cccaagatccagcctccctctcctgcggggtcagggtctatgcagggaccgcagactcct
cagtcaaccagcagttccatggcagaaggaggtgacctgaagccaccaactccagcatcc
acgccacacagtcagatcccccctttgccaggcatgagcaggagcaattcagtcgggatc
caggatgcctttcctgatggaagtgaccccacattccagaagcggaattccatgactcca
aaccctgggtaccagcccagtatgaatacctctgacatgatggggcgcatgtcctatgag
ccaaataaggatccttatggcagcatgaggaaagctccagggagtgatcccttcatgtcc
tcaggacagggtcccaatggtgggatgggggacccctacagccgtgctgccggccctggt
ctggggaatgtggcgatgggaccacgacagcactacccttatggaggtccttatgacaga
gtgaggacggagcctggaataggacctgagggaaacatgggcactggggccccacaaccg
aatcttatgccttccaacccagattcgggaatgtactctcctagccgctaccccccacag
cagcagcaacagcagcagcgacatgattcctatggcaatcagttctccacccaaggcacc
ccttctggcagcccctaccccagccagcagaccacaatgtatcagcagcagcagcagaat
tacaagcggccgatggatggcacatacggccctcctgccaagcggcatgaaggagagatg
tacagcgtgccatacagcacagggcaggggcagcctcagcagcagcagttgcccccagcc
cagccccagcctgccagccagcaacaagctgcccagccttcccctcagcaagatgtgtac
aaccagtatagcaatgcctatcctgccactgccgctgctgctacagagcgccgaccagca
ggcggcccccagaaccaatttccattccagtttggcagagaccgtgtctctgcaccccct
ggctccaatgcccagcagaacatgccaccacaaatgatgggtggccccatacaggcatcg
tctgaggttgctcagcaaggcaccatgtggcaggggcgtaatgacatgacctacaattat
gccaacaggcagagcgcaggctctgccccccagggtcccgcctatcatggtgtgaaccga
acagatgaaatgctgcacacggatcagagggccaatcacgaaggcccatggccttcccat
ggcacacgccagcccacatatggtccctctgcccccgtgccccccatgacaaggccccct
ccatctaactaccagcccccaccaagcatgcagaatcacattcctcaggtatccagcccc
gctcccctgtcgcggccaatggagaaccgcacctctcctagcaagtctccattcctgcac
tctgggatgaaaatgcagaaggcaggcccaccagtgcctgcctcgcacatagcacccacc
cctgtgcagccccccatgattcggcgggatattaccttcccacctggctctgttgaagcc
acacagcctgtgttgaagcaaaggaggcggctcacaatgaaggacattggaaccccggag
gcatggcgggtaatgatgtccctcaagtctgggctgctggcagagagcacgtgggcatta
gacaccattaacatcctgctatatgatgataacagcatcatgaccttcagcctcagtcag
ctcccagggttgctggagctccttgtggaatatttccgacgttgcctgatcgagatcttt
ggcattctaaaggagtatgaggtgggtgacccaggacagagaacattactagaccctggg
agattcagcaaggcctctagtccagcccctgtggagggggaggaggaagaagacctccta
ggtcctaaactggaggaggcagaagaagaggaagtagttgaaaatgatgaggagatggcc
ttttcgagcaaggacaagccagcctcagagaatagtgaggagaagctgatcagtaagttt
gacaagctaccagtgaagatcgtacaaaagaatgacccatttgtggtggactgctcagat
aagcttgggcgcgtgcaggagtttgacagtggcctgctgcactggcggattggtgggggg
gacaccactgagcatatccagacccactttgagagcaagacagagctgctgcctacccgg
ccttatgtgccctgcccaccagccccccggaaacatgtcacagcagcagagggcatgcca
gggacaacagagcaggagggtcccccacctgatggcccgccagaaaaacgaatcacagcc
accatggatgacatgttgtccacccggtctagcacattgaccgaggacggagctaagagt
gcagaagccaccaaggagagcagcaagttcccattcggcatcagcccagcacagagccac
cggaacatcaagattctagaggatgaaccccacagtaaagatgagaccccactgtgtacc
cttctggactggcaggattcccttgccaagcgctgcgtctgcgtgtccaacaccatccgt
agcctgtcatttgtgccaggcaacgactttgaaatgtccaaacacccggggctgctgctg
atcctgggcaagctgatcctgctgcaccacaagcacccagaacggaagcaggcaccactg
acttatgagaaggaggaggagcaggaccaaggggtgagctgcaacaaagtagaatggtgg
tgggactgcttggagatgctccgggaaaacaccttggtcacgcttgccaacatctcgggg
cagttggacctctccccataccctgagagcatctgcctacctgtcctggacggactccta
cactgggcagtctgcccttcagctgaagcccaggaccccttctccaccctgggccccaat
gccgtcctctccccccagagattggtcttggaaaccctcagcaaactcagcatccaggac
aacaatgtggacctgatcctggccacaccccccttcagccgtctggagaagttgtatagc
accatggtgcgcttcctcagtgaccgaaagaacccggtatgccgggagatggctgtggta
ctgctggctaacctggctcagggtgacagcctggcggcccgcgccattgcagtgcagaag
ggcagcatcggcaaccttctgggcttcctagaggacagccttgctgccacgcagttccag
cagagccaggccagcctgctccacatgcagaacccaccctttgagccaaccagtgtggac
atgatgcggcgggctgcccgcgcgctacttgccctggccaaggtggacgagaaccactcg
gagttcacactatatgagtcacggctgttggacatctcagtatcaccattaatgaactca
ttggtttcacaagtcatttgtgatgtactgtttttgattggccagtcatga
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integrated database retrieval system
