Trichechus manatus latirostris (Florida manatee): 101344394
Help
Entry
101344394 CDS
T05135
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmu03016
]
101344394
Enzymes [BR:
tmu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
101344394
Transfer RNA biogenesis [BR:
tmu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101344394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
DUF3280
Motif
Other DBs
NCBI-GeneID:
101344394
NCBI-ProteinID:
XP_004380908
UniProt:
A0A2Y9DV10
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MDPSLDTWNFSSPLISLWINRFYIYLGFAFGISLWICVQIVLKKQDKNSQEKSVPKVTWD
LMTNGSVSHQKREVFVSGVKIFYGSQTGTAKGFAEVLAESVTSLDLPATIINLKDYDPDD
HLVEEVTSENVCAFLVATYTDGQPAESAKWFCKWLEEAANDFRFGRTYLKGMRYAVFGLG
NSAYTSQFNKVGKNVDKWLWLLGARRVLTRGEGDCDTVKSKHGSIEADFSAWKTRLTSRL
QELHQGEKKPCGSNCKKGKCESGQHGPEGREPGPHTLEESPHRDAEEEEPFESSSEEECG
TEDQQSLNSVVDVEDLGNIMDRVKKEKKEKEQQEEKSSLFRNTGKNEDNERRAMITPALR
EALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCV
FCWRHHTNPVGTEWRWKMDQPEMILKEAIENHQNMIKQFKGVPGVRAERFEEGMKVKHCA
LSLVGEPIMYPEINRFLELLHQCKISSFLVTNAQFPEEIRNLKPVTQLYVSVDASTKDSL
KKIDRPLFKDFWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDELQAYAELVSLGNPDFIE
VKGVTYCGESSASNLTMANVPWHEEVVRFVHELVDLIPDYDVACEHEHSNCLLIAHKKFK
IDREWWTWIDYNRFQELIQEYENSSGSKTFCAKDYMAKTPQWALFGAHERGFDPKDTRYQ
RKNRSKDISGR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctttggatacgtggaacttctcctcacctttaatatcattatggataaac
aggttttacatatatttgggctttgcctttggtattagcctttggatctgtgtccagatt
gtcctcaagaagcaggataagaactcacaggagaaatctgttccaaaagtcacttgggat
ctgatgacaaatggttctgtctcccatcaaaagagggaagtctttgtgtctggagtgaag
attttctatggttcccagactggaacagcaaagggatttgctgaagttcttgctgaatca
gttacctcccttgatctgcctgcaacgattattaatttgaaagactatgatccagatgat
catctagtggaagaggttactagtgaaaatgtctgtgccttcctggttgctacgtacact
gatggtcagccagccgagagtgctaagtggttctgcaagtggttggaggaagcagccaat
gattttcgatttggcagaacttacctgaaggggatgagatacgcggtgttcggcctggga
aactctgcctacacaagccagttcaacaaggttggcaaaaatgttgataagtggctctgg
ctgctgggtgcccgtcgtgtgctgactcgaggggagggagactgtgacacggttaagagc
aaacatggcagcattgaagctgacttcagcgcttggaagaccaggctcacctcccggctg
caggagcttcatcaaggagagaaaaaaccctgtggcagcaactgcaagaaagggaaatgc
gaatccggtcagcatggccccgaggggcgggagccggggcctcacactctagaggaatcg
ccccacagagatgctgaggaggaggagccctttgagagcagcagcgaggaggagtgtggt
accgaggaccagcagagtctgaattctgtcgttgatgtggaggatcttggcaatattatg
gatcgtgtgaagaaagaaaagaaagaaaaggagcaacaggaagagaaaagtagcttgttc
aggaacacagggaagaatgaagacaatgagagaagagctatgataacgcctgctctccga
gaagcccttactaaacaaggatatcagttgattgggagccactctggggtgaagctttgc
aggtggacaaagtcaatgctccgagggagaggaggttgctataaacatacattttatggc
atcgaaagccatcgctgcatggaaaccacccctagcctggcatgtgcaaataaatgtgtc
ttctgctggcggcaccacaccaatccggtgggcaccgaatggcggtggaagatggaccag
cctgaaatgatcttaaaagaagccattgaaaaccatcaaaacatgattaagcaatttaaa
ggagtaccaggtgtcagagctgaacgctttgaggaaggaatgaaggtcaaacactgtgct
ttgtcccttgtgggagaaccaatcatgtacccagaaatcaacaggtttttggagctcctc
caccaatgtaaaatctccagcttcctggtcacaaacgcacagttccccgaggaaatcagg
aacctcaaaccagttacccagctctatgtcagtgtggatgccagtaccaaagacagcctg
aagaaaatcgaccgcccactcttcaaggatttctggcaaagattccttgacagtttaaaa
gctttggctgaaaagcaacaacggaccgtctacagactgacactcgtgaaagcgtggaat
gtggatgagctccaggcctacgctgagctggtgtcccttgggaatcctgacttcattgaa
gtgaagggtgttacctactgtggagaaagttctgcaagcaatctgaccatggccaacgtg
ccctggcacgaggaagtggtgcgctttgtccacgagctggtggatctgatccccgactat
gatgttgcatgtgaacatgaacactccaattgcctcctgatagcacacaaaaagtttaag
attgatagagaatggtggacgtggatcgattataatcgcttccaggagctcatccaagaa
tatgaaaatagcagtggatcaaaaactttctgcgcaaaggattatatggccaaaactcct
cagtgggcattatttggtgcccatgaaagaggctttgatcccaaggacacaagatatcag
agaaagaacagatcaaaggatatttctggacgttga
DBGET
integrated database retrieval system
