Trichechus manatus latirostris (Florida manatee): 101344610
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Entry
101344610 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101344610
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101344610
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101344610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
101344610
NCBI-ProteinID:
XP_023583684
UniProt:
A0A2Y9QWD3
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQQLPQHAERCDFAPARCRHPGCGQV
LLRRDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARALRAHNGALQARLGALH
KALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGGK
GEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQIH
DRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSELQLVDTGTQTD
ITFEHIMALSKLSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIHQEMDREELELEEVDLYR
VNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEA
VALLTSEENKNFSLLIARTELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTGSMLQ
QKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDPTASSNPLSGQS
KLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDECERFRELLELKCQVKSASPYSL
YYPSSPLDASKSDPESVDKELELLNEELRNIELECLSIVRAHKMEQYRESWMLHNSCFRN
YTSIDVRRHKLSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLKRATEGISSQ
GSDGAAGTTEAYGASPKNLLSITEDPEVGSPNYSPPKELDLSQPLESKERKPSDGSPTPS
QKLGGSYLSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNSA
SQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAISEMKMGRY
WSKEERKQHLVKAKEQRRRREFMMQSRLDCLREQQGADDKKEMNIIELSHKKMMKKRNKK
IFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccgga
tgcgtgttgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagcttaaccacgtcctgccgctgaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcggccgagtggtcaagctgcagcagctgccgcag
cacgctgagcgctgtgactttgcgcccgcacgctgccgccacccgggctgcggccaggtg
ctgctgcggcgcgacgtgngannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ngcgcgcgggcactgcgggcgcacaacggcgcgttgcaggcccgcctgggcgcgctgcac
aaggcgctcaagaaggaggcgctgcgcgcaggcaagcgcgagaaatcgctcgtcgcgcag
ctggccgcagcgcagctcgagttgcagatgacggcgttgcgctaccagaagaagttcacc
gagtacagtgcgcgcctcgactcgctcagccgttgcgtggccgcgccgcccggcggcaag
ggtgaagaaaccaaaagcctgactcttgtcctgcaccgagactctggctccctgggattc
aatattattggtggtcggccctgtgtggacaaccaagatggatcatccagtgaagggatc
tttgtatccaaaatagttgacagtgggcctgctgccaaggaaggaggcctgcagattcac
gacaggattatagaggtaaacggcaaagacttatccagagcaactcatgatcaagctgtg
gaagctttcaagacagccaaagagcccatcgtggtccaggtgttgaggagaacgccacgg
accaaaatgttcacacctccctcggagttgcagctggtggacacgggaactcagactgac
atcacctttgagcacatcatggctctctccaaactgtcctctcccaccccgccagtgctg
gatccatacctcttgccagaagagcatccctcagcccacgaatactacgatcccaatgac
tacattcatcaggagatggacagggaagagctggagctggaggaggtggacctgtacaga
gtcaacagccaggacaagctgggcctcacagtgtgctaccgaacggacgacgaagacgac
attgggatttacatcagtgagatcgaccccaacagcattgcggccaaggacgggcgcatc
cgagaaggagaccgcattatccagattaatgggatagaggtacaaaaccgtgaagaggcc
gtggctcttctaacaagtgaagaaaacaagaacttctccctattgattgcaaggactgaa
ctccagctggacgaaggctggctggacgatgaccggaacgactttctggacgacctgcac
atggacatgctggaggagcagcaccaccaggccatgcagttcacagggagtatgctacag
cagaaaaagcatgaggaagatggtggaaccacagacacggccaccattttgtccaaccag
cacgagaaggacagcggtgtgggacgcacggacgaaagcacccgcaatgatgaaagctca
gagcaggagaacaatggagacgaccccacggcgtcctccaacccgctgtcggggcagagc
aagctgacctgcagccaggacactctgggcagtggtgacctacccttcagcaacgagtcc
ttcatctcggccgactgcaccgacgccgactacctgggcatcccggtggacgagtgtgag
cgcttccgggagctcctggagctcaagtgccaggtgaagagcgccagtccctacagcctg
tactaccccagcagccccctggatgcgagcaagagcgaccccgagagcgtggacaaggag
ctggagctgctcaacgaggagctgcgcaacatcgagctggagtgtctcagcatcgtgcgc
gcccacaagatggagcagtaccgcgagtcctggatgctgcacaacagctgcttccgaaac
tacaccagcatcgatgtccgcagacacaagctctctgacatcaccgagctcccggagaaa
tccgataaagatagctcgagcgcctacaacactggggagagctgccggagcaccccactc
accttggaaatctcccccgacaactccttgaagagagccacggagggcatcagcagtcag
ggcagcgacggggcggcaggtaccacagaagcatacggggcatccccaaagaatctgctc
tccatcaccgaagatccggaagtcggcagccctaactatagccctcctaaagagctggac
ctcagccagcccctggagagcaaagagaggaaacccagcgacgggagccccacccccagt
cagaagctgggtggctcctacctgtccccctaccaccattctccgtacaagcatgcccac
atcccggcccacgcccagcactaccagagttacatgcagctgatccagcagaagtcggcg
gttgagtacgcgcaaagccagatgagtctggtgagcatgtgcaaggacctgaactccgcc
agccagtcagagccgaggatggagtggaaggtaaagatccggagtgatggcacgcgctat
atcaccaagaggcccgtgagggatcgcctgctgagggagcgcgccctcaagatccgggag
gagcgcagcggcatgaccacggatgacgacgccatcagcgagatgaagatggggcgctac
tggagcaaagaggagcggaagcagcacctggtgaaagccaaggagcagcggcggaggcgt
gagttcatgatgcagagcaggttagattgtctgagagagcagcagggggccgacgacaag
aaggagatgaacatcattgaactgagccacaaaaagatgatgaagaagaggaataaaaag
atatttgacaactggatgacaatccaagaactcctaacccacggcacaaagtctccagat
ggcactagagtatacaattccttcttatccgtgactactgtataa
DBGET
integrated database retrieval system
