Trichechus manatus latirostris (Florida manatee): 101344656
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Entry
101344656 CDS
T05135
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101344656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101344656
03036 Chromosome and associated proteins [BR:
tmu03036
]
101344656
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101344656
Coactivators
SAGA/TFTC/STAGA complex
101344656
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101344656
STAGA complex
101344656
TFTC complex
101344656
SAGA complex
101344656
SLIK complex
101344656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_RFWD3
PROPPIN
Beta-prop_IP5PC_F
WD_LRWD1
Nbas_N
Beta-prop_DCAF12
vATP-synt_AC39
Mala_s_1-like
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
101344656
NCBI-ProteinID:
XP_004384175
UniProt:
A0A2Y9DZE7
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVLPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLSLHIHLDVQPAKRTDYQLYASGSSSRSESSGLEPSDMPTPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCVKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDSAGTEMKILRGHCGPVYRTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASGSYDRTARLWSFDRTYPLR
IYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSAQQGHSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASGSMDNSVRVWDIR
NTYCSAPPDGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcacagagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggattcagaaggtcccctgaaacaaggattgagactgtcacagactgctgaa
gagatggcagctaatctcacagtccaatcagaatctggttgtgccaacatagtgtctgca
gcaccttgccaggcagagccccagcaatatgaagtacagtttggacgactacggaatttt
ctcactgattctgattcccagcacagccatgaagtgttgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttttacagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaaacttcgagcattcctagat
aacaagtatgtggtccgtctccaagaagacagctacaactaccttatccgctacctccaa
agtgacaacaatactgccctgtgcaaagtcctctccttacacattcatcttgatgtgcag
cctgccaagagaacagactaccaactctatgccagtggcagctcctcacgtagtgagagc
agcggcttagagcccagtgacatgcccacccctattctgcagaatgaggctgccctggag
gtcttgcaggagagcattaagcgagtcaaggatgggcctccttcacttaccaccatctgt
ttctatgccttctataacacagagcagctgctgaacactgcagaaatttccccagatagc
aagctgcttgctgctgggtttgacaactcctgtgtaaaactttggagtttacgatccaag
aagttaaagtcagaaccccaccaagtagacgtgtcccgcatccacttggcttgtgatatt
ctcgaggaagaggatgatgaggatgatagcgcaggcacagaaatgaagatactgcgagga
cattgtgggcctgtgtacagaacaaggttcctgtcagacagctcagggttgctctcttgt
tctgaagacatgtccattagatactgggacctcggaagtttcaccaacactgtgttgtac
caaggacatgcctaccctgtgtgggacctggacattagcccccatagtctgtacttcgcc
agtggctcctacgaccgcactgccaggctgtggtcgtttgaccggacttacccactgaga
atatatgcagggcacctggcagatgtggactgtgtcagattccaccctaattctaactac
ttagccaccggctccaccgataagaccgtccggctgtggagtgctcagcaggggcactct
gtgaggctcttcacgggccaccgaggacctgtgctttctcttgcattttctcccaatggt
aagtacttggcatccgctggcgaggaccagaggttgaagctgtgggacttggcatctgga
accctttataaagagttgagaggccacacggacaacatcactagccttacgttcagcccg
gacagcagcctgattgcctcgggctccatggacaactctgtgcgtgtttgggacatcagg
aacacttactgcagtgctcctcctgatggctcctccagtgaactcgtgggcgtatacact
gggcagatgagtaatgtgctgagtgtacagtttatggcctgtaaccttcttttagtgacg
gggattacacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
