Trichechus manatus latirostris (Florida manatee): 101345211
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Entry
101345211 CDS
T05135
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101345211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101345211
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
101345211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
101345211
NCBI-ProteinID:
XP_004379108
UniProt:
A0A2Y9DQH1
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGSNYDFFAHGP
PSQAQSPADPNFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHSMPGEVFSGGPSPPFPMGGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccgggtgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgttcagtgctgcgagtgcaagaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttt
ggcaccaagtgcgcgggctgcgcgcaaggcatctcgccgagcgacctggtgaggaaggcc
cgcagcaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctatgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcgtccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggacccactccaggacgaccccaaggagacggacaactcgact
tcgtccgacaaggagacggccaataacgagaacgaggagcagaactccggcaccaagcgg
cgcggcccacgcaccactatcaaagccaagcagctggagacgctcaaggccgccttcgcc
gccactcccaagcccacgcgccacatccgcgagcagctggctcaggagaccggcctcaac
atgcgtgtcatccaggtgtggttccagaatcgaaggtccaaagaacgccggatgaaacag
ctgagcgcgctgggcgctcggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccactccgtacacctactacgga
gactaccaaggcgactactacgggccggggagcaactatgacttcttcgcgcacggcccg
ccgtcgcaggcgcagtccccggccgacccgaacttcctggctgcctcggggcccggctcg
acgccgctgggcgcgctggagccgccgctcgcgggcccgcacgccgccgacaaccccagg
ttcaccgacatgatctcgcacccggacacgccgagcccggagccgggcctgccgggcgcg
ctgcactccatgcctggcgaagtcttcagcggcgggcccagcccgcccttccccatgggc
ggcacaagcggctacagcggacccctgtcacaccccaaccccgagctcaacgaggccgcc
gtgtggtaa
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