Trichechus manatus latirostris (Florida manatee): 101345847
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Entry
101345847 CDS
T05135
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tmu03037
]
101345847
04040 Ion channels [BR:
tmu04040
]
101345847
Cilium and associated proteins [BR:
tmu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101345847
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101345847
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PLAT
Polycystin_dom
PKD_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101345847
NCBI-ProteinID:
XP_012414878
UniProt:
A0A2Y9G1I1
LinkDB
All DBs
Position
Unknown
AA seq
2499 aa
AA seq
DB search
MPVTRPFDKPSAVIKFFIFQCNPSAGAPYSLKMEISNCIIRPLCSAEDVVKKLPHGTHVL
LTTVETGTWTEAMGPVQVRSKLSLLWSTSHSLAVPRSSANVPPGARHSQGRSATQSEPRK
LCFLSPCLTEAITTHDPAVVVVNPVSQWLSEGDTWASPNLGFKVQMASEGSLCLVIDFGD
SSGVQMKTRNTSEDITVTAYHHYRKEGVYMLKAVIYDEFCGTEVELGPYYMEIGHEVVSV
FMNSSSVHDGEVLTFAGSHTDQKSTVVMHHFPSTSSYNVSFTSQNKAGDSQAWPSVTVWY
KMQPVSVYTNGTVFATDADITFVAVTKEMRPLEFEWHFGEDPPVRTTSRSIEKRLHIPQR
YQVVVKASNGITSVVSEPHPINIQKKIVANRLLSTSSALVNASVTFECRINFGTDVAYLW
NFGDGTVGLGNSTNTHVYSREGEFTVEVLAFNKVSSASLTEQLFIVGTSCQPPPVKNMGP
GKVQVWRSQPVRLGVTFEAAILCDIFQGLSYTWSFMKSNGSHVSLPPAVDIHRQTVTVPS
YFLEYGNYTAVAKVQVKGSMVHSNYSVGVDVRARTPVSVVSEGTHLFITKAPSSTIVLSG
SQSYDPDSPGTPLRYHWRCAPAGAPAHPCFHTPTPSGLDSTAPVISFAATDLSDGYDQFL
VTLKVSSGSRTSSEAQVFLSLRSKPALRFIHISWVNFKNSFVNWNEELSLQAVCEDCGDI
QDLSYSWDLFLVNATEQYSIEDFEAYYDDIQEAIPSKGRQPGNSVNFPGSEPSGSDDKSP
SEGDNLVGPFHSMGSAVPSLMIDWPKSLIRRAIFQGYTSSGIMEQTVTVKPFSLRRGETY
VIQASVASKHTLLGKAQLYLTVNKGPQDVACQVQPHHGHEAHTIFSVFCMSGKPDFHYEF
SYQIGNASKRTLYRGRDTQYYFALPAGEPLDSYRVMVFTEITDGEGSKLQPCAVVVTVLP
RYRGNIASANYCLGEDLYNSSLQNLSTLLLMGSYMEIRNYITMITRILSCLAKEDRGSSC
GQWSRIQDALISSVCKLEFADQEEIIDSVLMLSDLLSFPNKLTFRSAVLILKYTRMLLAQ
SRLSGRFVIDRRLMSNLIFLISGVLEVSDQEKSSNVDYLQEEGIKVISDLLLSSLSVSSE
LQLHIGTGQMEFRVCLHYSLQNTVQSIGSVQVHLPSDLAEQSLDGTDIQNPCYISQLILF
KNNPYPRGRAPGQVGGAVGLSLYDCSSRQPISRHWLQTPVTVEFGEEDDLNNRRNNTTFL
LPRDEMNFHQFIGLPENSQESLQIRIKFSKTITRAFPIMLLVRFSKKPTPSDFLVKQVYL
WDEQIVQIYIPAFSLEDTSSGYLALLDADYDRTPPNKYLAKAVNYTVDFRWIQCLFWDKR
EWKSSTFPPQPGTFPEKVNCSYDRLTAFSLVRRKLNTSFEMSDISKLQSHPENLIPSIFI
VLFMIFYAFLVTKSKHVDHHEKKKTGYIFLQESPSPDQQLYAVVIDTGFRAPAQLTAKVY
IVLYGENGLSGTKELYCPEKPLFERNSRHTFILSVPGHLGPLWKIRLWHNNCGPSPDWHI
SHVLVKELRTGQSWFFSAECWLAAGRGDGRVERELIPLHRGLGFQKLLYAKFTEYLEDVH
VWISVYSRPSYSSYLHTQRLTVCFSLLCTYSCLTAALTAAQHEQLSLDIGLTHVTPGSFR
TGLLCSLLASPGALLLSLLFRLSQDTTGPSREEPGCRLRAVLGKGTQAPSRGLAGLAPQG
QRVLPPWSGSAVWALCTMVSIACGLGTGVLGYRFGPTQCVRWLHLLFLSVVSCAFVTQPL
MICLMALNFAWKRKDDKAFFTESLCDATKDLEFELEQLSQTRVPLSSSCGIPDCASEFEK
ILAARQRARRLRWARPPSMAQLKATKERMRKEIRARATLRDFFMYLLMLLLLMFITYGKF
SHDEYALNQAIRNEFTRNAENSFGGLRSTDAWWEWSLTRLLDGLYGADMQGAQSGALGGK
CYLIGISIIKQLNTSLNSLCKLPSPFASLIKDSLPACSPGVRGPVNHHMIDPKNQKVTSG
HPEGCRARENCALRLGRTRPEAHTTLTHLRANRWIGRDTRAVSVHFVLYNPPTRLLTSVS
LRAEVTPTGHLLPSSQVESASVFLRDLALRYPLMVTELVFLVLNLVHLCFQLYIMIEEGI
LSYWRKPSNWLELSVVGLSLAYYAASSHLVILAGDVIDQFHKGFVQEFMDLSLITSWNQR
ARWLQGILLLLLILKSIYLLCTPKTMSSCSFMLRRSLSSTITLGLAGVLMVAIHSHLHRF
LLSSQALPLSTFADSSHMLPFPFLGRSRREAFSGLSKSNQRAVACYHGAIFTVMTILWLV
MLRGSFMTFARKRKSFPSKHLVRLKDVTAHTWGKALTFLGLERPRLEETQMVENHTYYLD
EFAELLDELLLKINSLSDSLHLPLLEKQSNSTVDAKAEDSPLVGVSGYQATGPLNYANLD
QEKSSWPAGCFLFVLPWDAFVQALVVASPRDSLTLQELG
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaactaggccatttgataaaccttcagctgttattaaattttttatatttcag
tgcaacccttctgcaggggcaccctacagcttgaaaatggagatttccaattgtatcatt
agaccactgtgctctgcagaggatgtagtcaagaagctccctcatgggacccatgtgtta
ttgactactgttgagacggggacctggactgaggcaatgggccctgttcaggtcaggagc
aagctgtccctcctgtggtcaacttcacattcccttgctgttcccagaagctctgcaaat
gttcctcctggcgctcgccactcccagggccgctctgcaacccaatctgagcccaggaag
ctctgcttcctcagtccatgtcttactgaggccatcactacacacgatcctgccgttgtt
gtggtgaatcctgtcagccagtggttatcagaaggtgacacttgggcatctccaaatctg
ggtttcaaagtccaaatggcttctgaaggatctctttgtctggtgatagattttggggac
agctcaggagtccaaatgaagacccgaaatacgtctgaggatatcacagtcacagcctat
caccactacaggaaagaaggtgtctatatgctcaaggcagttatttatgatgagttttgt
ggaactgaagtggaacttggaccttattacatggagattggtcatgaggttgtgtctgtg
ttcatgaattccagcagtgtgcatgatggtgaagttcttacctttgctggctcccacaca
gatcagaaaagcactgttgtcatgcatcattttccatccacttcctcatataatgtgtcc
ttcacttctcaaaacaaagcgggtgacagccaagcctggcccagcgtgactgtttggtat
aagatgcagcctgtttctgtctacacaaatggaactgtgtttgccacagatgcagacatc
acttttgtagctgttaccaaggaaatgagacccttggagtttgagtggcattttggagaa
gacccaccagtgaggacaacttcaagaagcatagaaaagagactccacatcccacagcgg
taccaggtggtggtcaaggcttccaatgggatcactagtgtggtctctgagccccacccc
atcaacatccagaagaaaattgttgccaatcgcctcttatccacctcctctgctctggta
aatgccagtgtgacctttgagtgcaggattaacttcggcacggatgttgcttacctgtgg
aactttggggatggtactgtcggtctgggaaacagcaccaacacccatgtctacagcagg
gaaggagaatttacagtggaggtcctcgcctttaacaaggtcagctctgcctcactaaca
gagcagcttttcatcgtgggcacatcctgccagcctccgccagtgaagaacatggggcct
gggaaggtccaggtatggcggtctcagccagtgagactgggagtgacctttgaagctgcc
attctctgtgacattttccaaggcctttcttacacctggagctttatgaagtctaatggc
tcccatgtgtcccttccccctgctgttgacatccacagacaaaccgttactgtcccaagc
tactttctggagtacggaaactatactgcagttgctaaggttcaagtcaaaggcagcatg
gtgcacagcaactactcagtgggggtggatgttcgagccaggacccccgtcagtgtggtc
tcagagggcacacacctcttcatcaccaaggctccctcctccaccatcgtcctcagtggg
tcccagtcctatgaccccgacagcccgggtacacctctcaggtaccactggaggtgcgct
cccgctggggcgcctgcacacccatgcttccacactcccacgcccagtggactggactcc
acggcgccggtcatctcctttgcagcaacagatctcagtgacggctatgaccagttcctg
gtgaccctgaaggtgtccagcggcagccggacctcctccgaagctcaggtgttcctgtcc
ctccgctccaagccagcactcagattcatccatatttcctgggtcaactttaaaaacagc
tttgttaactggaatgaagaactttctcttcaagctgtgtgtgaagactgtggtgatata
caagatctttcttattcctgggacctctttttagtcaacgcaacagaacagtatagtata
gaagattttgaagcttactatgatgatatacaagaagcaataccctcaaaaggaagacaa
ccagggaacagtgtgaactttcccggatcagaaccaagtggaagtgatgacaaaagcccc
agtgaaggggataacctggtcggtccattccactccatgggcagtgccgtgccctcactg
atgattgactggcccaagtccctgattagacgggctattttccaaggttatacctcatca
ggtatcatggaacaaactgtgacagtaaagccattttcactgagaaggggagagacatat
gtcatacaagcttctgtggcttcgaaacacaccttgctaggtaaagctcagctgtacttg
acagtcaacaaaggcccccaggacgtagcctgtcaggtacagccccatcatggccacgag
gcgcacaccatcttcagtgttttctgcatgtcaggaaaaccggactttcactatgaattt
agctaccagataggaaatgcctccaaacgtactttgtaccgtggaagagatacccagtat
tattttgctttgccagctggtgagccattggacagttatagagtcatggttttcactgag
atcacagatggcgaaggctccaagttacagccctgtgctgtggtagtgaccgtgctgccc
cgttaccgtgggaacatagcctctgcaaattactgcctgggcgaggatctatacaattcc
agcctgcaaaacctatccaccctcctgctgatgggaagttacatggaaatcaggaactat
atcaccatgatcaccaggatcctgagttgtttggctaaggaggacagaggctcttcctgt
ggccagtggtcacgaatacaggatgcattaatttcttcagtttgcaaattagaatttgca
gatcaggaagaaatcattgattctgttcttatgcttagtgacctcctaagcttccctaat
aagttaaccttcaggagcgcagttcttatcctcaaatacacacggatgctccttgctcaa
agccggctgtctggaaggtttgtgattgacagacgactcatgtcgaaccttatcttcctc
atatctggagtcttggaagtatctgaccaagaaaaatcaagtaatgtggactatctacaa
gaagaaggaattaaagtcatctcagacttattgttaagctctctctctgtgagcagcgag
cttcagctccacattggcactggacagatggaattccgggtctgccttcattacagtctt
cagaacactgtccagagtattggctctgtccaggttcacttacccagtgacctagctgag
cagagtcttgatgggacagacattcagaacccatgctatatcagtcaactcatactcttc
aaaaataatccatatccaaggggacgagctcctggtcaggttggtggagctgtgggtctc
agcctctacgactgctccagcagacagcccatcagcagacactggctacagacgcccgtg
accgtggagttcggggaggaagacgaccttaataacagaagaaataatacaacatttcta
ttgcctcgggatgaaatgaattttcatcagttcatcggacttcctgaaaactcccaggaa
tctctacagataagaatcaaattttctaagaccatcacaagagcttttcccataatgctg
ctagtaagattctccaagaaaccaactccctctgattttctggtgaaacaggtctactta
tgggatgagcaaattgtacagatttacatacctgctttttcactcgaagataccagctcg
ggttacttggccttattagatgctgactatgacagaacacctccaaacaaatatttagct
aaagcggtgaactacaccgtagatttccggtggatccagtgtctgttttgggataagagg
gagtggaaatctagcaccttccctccacaaccaggaacttttccagaaaaggttaactgc
agctatgatcgcctcacagcattcagtcttgtgagaagaaagctgaacaccagttttgaa
atgagcgacatttctaagttacagagtcacccagaaaacctgattcccagtattttcatt
gtgctttttatgattttttacgcatttttggttactaaaagcaaacatgtagatcatcat
gaaaaaaagaaaactggttacatttttctgcaagaaagcccctcaccagaccaacagctg
tatgcagtggttattgacacaggctttcgtgctccagcccagctgaccgcaaaggtttac
attgttttatacggtgaaaatggactttcaggaaccaaagagctttactgtccagagaag
cccctgtttgaaaggaattccaggcacacctttatactgagcgttcctggtcatcttggt
cctctttggaagatccgcctctggcacaacaactgtggtccttctccagactggcacatc
agccatgtgctggtgaaggagctgcgcactgggcaaagctggttcttctccgcggagtgc
tggcttgctgcaggccgaggggatggaagggtggagcgggagctcatccctctgcaccga
ggcctcggcttccagaagcttctatacgccaagtttacagagtacctggaggatgtccat
gtctggatctcagtgtacagccggccctcatacagcagctacctgcacacacagcggctc
acggtctgcttctccttgctgtgcacctactcctgtctcaccgccgcgctcactgctgca
cagcatgagcagctctctttggacatcggcctcacccacgtcacccctggctccttcagg
acaggcctcctgtgcagtcttctggcttctcccggggcactgctcttgtcgctgctcttc
cggctcagccaggacaccacaggaccatccagagaggagcctggctgcaggctgagggcc
gtgctagggaaggggactcaggcacccagtagagggcttgcaggcctcgctccccaagga
cagagggtgcttccaccttggtcaggctctgcagtctgggccctgtgcacaatggtgtcc
atagcgtgtggtttgggaacaggagttctaggatacaggtttggcccgacccagtgtgtg
cggtggctgcatctgctgtttctctccgtggtgagctgcgcttttgtcacccagccactg
atgatatgtttgatggcattgaattttgcttggaagagaaaagatgacaaagcctttttt
actgagtctctgtgtgatgctaccaaggatttagaatttgaattggagcaactttcccag
acccgtgtccccctttcttcaagctgtggcattcctgactgtgccagtgaatttgaaaaa
atattggccgcccggcagcgagcacgccgtctgcgctgggctcgtccgccatccatggcc
cagctcaaagcaacaaaggagaggatgaggaaagagattcgtgcacgagcaactctgaga
gactttttcatgtacctcctcatgctgcttctgcttatgtttataacatatgggaaattc
tcccacgatgaatatgctctcaatcaagctattcggaatgaatttacaagaaatgctgag
aactcctttgggggcctgagaagcaccgacgcctggtgggagtggagtctgaccaggctt
ctggatggcctgtatggggctgacatgcagggggcccagtctggagctcttggaggaaaa
tgctatctaattggcatctcaataattaaacagctaaatacttctctgaatagtttatgc
aagcttcccagcccatttgcatctcttatcaaagactctcttcctgcctgtagccccggt
gtcagagggcctgtaaaccaccacatgatagacccaaagaaccaaaaagtgacctcgggt
catcccgagggctgcagggcgagagagaactgtgcgctccgcctgggcaggacaaggcct
gaagcccacacaaccctgacccacctcagggccaaccgatggatcggccgagacaccagg
gccgtctctgtgcactttgtcctctacaaccctccaacccggctcctcaccagcgtgtcc
ctgagggcggaggtgacccccacagggcatctccttccctcctcacaggtggagtcggcc
agtgtcttcctcagggacttggccctgagataccccctcatggttacagagctggtcttt
ctggtactcaacctggttcatctctgttttcaactctacattatgattgaggaaggcatc
ctcagctattggcgaaaaccaagcaactggctggagctctctgtggttggactgagcctt
gcctactacgcagcctccagccatcttgttattcttgctggggatgttatcgaccagttt
cataagggatttgttcaagaatttatggacctcagtcttatcacatcgtggaatcagagg
gcacggtggctccaaggaatcctcttactcctcttgatattaaaaagcatctatcttctc
tgcactccaaagacaatgtcctcctgctccttcatgcttcgccgctccctgtccagcacc
atcacgctagggctggccggggtcctgatggtggccatccactcacacctgcacagattc
ctgctctcctcccaggctctgccactgagcacctttgcagattcctcccacatgctgccg
tttccttttctgggaaggagcagaagagaagcattctcaggcctctccaagtctaaccag
cgggctgtggcttgctaccatggagccatttttaccgtaatgaccattttgtggctggta
atgctgagaggttccttcatgacttttgccaggaaaagaaaatcttttccaagtaaacat
cttgtgagacttaaagatgtcactgctcacacatgggggaaggccctcacctttctagga
ctggaaaggccaaggttggaagagactcagatggttgagaatcatacttactacctggat
gaatttgcagaactgttagatgaactgctgttgaagattaatagtttgtccgacagccta
catctgcctcttctagaaaaacaatccaacagcacagtggacgcaaaggcagaagacagt
cccttagtgggtgtttctggctaccaagctactgggcctctcaactatgccaatttggac
caggagaagagctcctggccagcgggctgctttttatttgttctgccctgggacgccttt
gtccaagctcttgttgtcgccagtccccgtgactcactcactttgcaggagttaggctag
DBGET
integrated database retrieval system
