Trichechus manatus latirostris (Florida manatee): 101345874
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Entry
101345874 CDS
T05135
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04136
Autophagy - other
tmu04140
Autophagy - animal
tmu05010
Alzheimer disease
tmu05014
Amyotrophic lateral sclerosis
tmu05016
Huntington disease
tmu05017
Spinocerebellar ataxia
tmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101345874
04136 Autophagy - other
101345874
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101345874
05014 Amyotrophic lateral sclerosis
101345874
05016 Huntington disease
101345874
05017 Spinocerebellar ataxia
101345874
05022 Pathways of neurodegeneration - multiple diseases
101345874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101345874
03029 Mitochondrial biogenesis [BR:
tmu03029
]
101345874
Membrane trafficking [BR:
tmu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
101345874
Mitochondrial biogenesis [BR:
tmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101345874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NWD2_C
WDR55
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT140_1st
EIF3I
DUF5711
BCAS3_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
101345874
NCBI-ProteinID:
XP_004374245
UniProt:
A0A2Y9DGN1
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAAEAADAPPGGIDPPLTCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHVKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEGS
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYLAYPGSLTTGEIVLYDGNSLRTVC
TIAAHEGMLAAIAFNSSGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLSDSRPEEPSTWSSYMGKVFMAATNYLPAQVSDMMNQ
DRAFATGRLSFSGQRNICTLSTIQKLPRLLVASSSGHLYIYNLDPQDGGECVLIKTHSLL
GSETTEENKENDLRPSLPQSYAATVARPSTSSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaggccgcggacgctcccccgggcgggatcgatccgccactcacttgcttt
tccttcaaccaggactgcacatccctagcaattggaacaaaggccggttataagctgttt
tccttgagttctgtggagcaactggaccaagtccatggaagcaatgaaatcccggacgtc
tacatcgtcgagcgcctcttctccagcagcctggtggtggtggtcagtcacgttaaaccg
aggcagatgaatgtgtatcacttcaagaaaggcacagagatctgtaattacagctactcc
agcaacatcctctccataaggctgaaccggcaaaggctgctggtgtgcctggagggctcc
atttacattcacaacattaaggacatgaagctgttgaagaccatcctggatatccctgca
aaccccacaggtctgtgtgccctctctatcaaccattccaattcttacttggcctatcct
ggtagcctgactacaggggagattgtgctttacgatggaaactccctgagaacagtctgc
actatcgctgcccacgaggggatgctggctgccattgccttcaactcctcgggctccaaa
ctagcgagcgcgtcggaaaagggcacagtcatccgggtgttctcggtacctgacgggcaa
aagctctatgagttccggagagggatgaaaaggtacgtgaccatcagctccctggtgttc
agtatggactcgcagttcctctgtgcctccagcaacaccgagactgtgcacatcttcaag
ctggagcacctctccgacagccgcccagaagagccctcgacctggagcagctacatggga
aaggtgttcatggctgccaccaactacctccctgcccaagtgtcagacatgatgaatcag
gacagggcctttgccaccgggcgtctcagtttctccgggcagaggaatatctgcacgctg
tcaacgatccagaaattgccaaggctgttggttgcatcatccagtggacacctttacatc
tacaacttggaccctcaggatggtggagagtgcgtcttaatcaagacccacagcttgctt
ggctcagaaacaacagaagagaataaagaaaatgacctcagaccttcattacctcagtct
tacgcagcaactgtagccagacccagcacatcttcagcctccacggtgccaggttattct
gaggacggcggggcgctccgaggagaggttattcctgaacacgagtttgccacgggacca
gtgtgtcttgatgatgagaatgaattcccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcaatcatga
DBGET
integrated database retrieval system
