Trichechus manatus latirostris (Florida manatee): 101345896
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Entry
101345896 CDS
T05135
Name
(RefSeq) THO complex subunit 2 isoform X5
KO
K12879
THO complex subunit 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101345896
09122 Translation
03013 Nucleocytoplasmic transport
101345896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101345896
03041 Spliceosome [BR:
tmu03041
]
101345896
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101345896
Spliceosome [BR:
tmu03041
]
Complex C
Other components
EJC/TREX
101345896
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101345896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
101345896
NCBI-ProteinID:
XP_004379645
UniProt:
A0A2Y9DRH8
LinkDB
All DBs
Position
Unknown
AA seq
1600 aa
AA seq
DB search
MAAATVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKNKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPSGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHR
REIVEAKQIVRKLTMVVLSSEKMDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVTALQNKRAPKQ
AENFEDLRRDVFHMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHISKVWDDISPQFYATFWSLTMYDLAVPQTSYE
REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKIYQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSSNGNSGS
NSSKTVKENDKEKAKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERANKDEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTAVPNVESKSTQEKEREKEPSRERDIAKEMKSKENVK
GGEKTAVSGSLKSPVPRSDIAEPEREQKRRKIDTHPSPSHSSTVKDNLIELKESSAKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRR
KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKQYPFRCNFFSQCNGKL
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtggttcccgcagagtggataaagaattgggagaaatcaggg
agaggcgaatttttgcatttatgccgaatcctcagtgaaaataaaagccatgatagttca
acttatagagatttccagcaagctctctatgagttatcataccatgtcattaagggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaaacaaaagagactattttacacagttggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattggggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataaacagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacattgtgtcacattcttgggttcaaattcaagttttatcaggaaccaagtgga
gagactccatcatctttatacagagttgcagcagtacttctacaatttaatcttattgat
ttagatgatctttatgtacatttacttccagctgataattgcattatggatgaacacaga
cgagaaatagtggaagctaagcagattgttagaaaacttacaatggttgtgttgtcttcc
gaaaaaatggatgagcgagaaaaagaaaaggaaaaagaagaggagaaagtagaaaagcca
cctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccatactatgcagcttcgcataagctaatagcc
cttgctatttgtaagctcattcatataactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttactgctttgcaaaacaagagagcaccaaaacaa
gcagagaactttgaagatttgaggagggacgtattccatatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtggttcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttgcttagcattactgatcaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcgtctctatggccagtggaagaacgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtgaaaccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacgtcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcaa
agtctggctagtttctgcggtgcagtttttcgtaaatacccaattgatcttgctggtctt
cttcagtatgtcgccaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcagcta
gaggctatgactggtggagagcagctaaaagctgagggtggctattttggccagatcaga
aacactaaaaaatcctctcagaggctaaaggatgcactattggaccatgatcttgcgctt
cctctgtgtttgcttatggctcaacagaggaatggtgtaatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaagctctatgatcagtgtcatgataccctggtacagttt
ggtgggtttttggcatctaacctaagcacagaagattatataaagcgagtaccttcaatt
gatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcacaccatatttcatcaaaatatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcataagtatatcacatcatgtgagatggtgatggctcctgtc
catgaagcagtggtctctttgcacatttccaaagtctgggatgacatcagccctcaattc
tatgccacgttctggtcattgacaatgtatgaccttgcagttccacaaaccagctatgaa
agagaagtcaataaacttaaaatccagatgaaagcaattgatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgctgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagcgagttctacaaagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagtcgcaagctgtactgaaaatgaagctagtcgatatggg
agatttctttgctgcatgttagagaccgtgaccaggtggcacagtgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggatttgat
ggtggaaataaagctgatcagttagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatcagtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaggctttggaaagaagagtgcataaaatctaccaagaagaaaaagagaagaggcct
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggccttcatcatcatcgataggaagtgcatctaaatcggat
gaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagct
gttaataaagcttctagtgccacaccaaaagggaattcaagcaatggaaatagtggctct
aacagcagcaaaactgttaaagaaaatgacaaagaaaaagcgaaagagaaagaaaaagag
aaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccaaaggaagagcgggcaaataaagatgaaaaagcaagagagaccaaggaaaga
acaccaaaatctgacaaagagaaggaaaaattcaagaaggaagaaaaagctaaagatgaa
aaattcaagaccgctgtccccaatgtagaatcaaaatcgactcaagaaaaggaaagggag
aaggagccatccagagaaagagatatagcaaaggaaatgaaatccaaggaaaatgttaaa
ggaggagaaaaaacagcagtttctgggtccttgaagtcacctgttccccgatcagatatt
gcagagcctgaaagggaacagaaacgccgcaaaattgatactcacccttctccatcacat
tcctcaacagtaaaggacaatctcatcgaactcaaggagtcttcagcaaagctctacatt
aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaaatcaagggaaagatccagagagagagagaaaaaagatgaaaaggacaggaaagag
cggaaaagggatcattcaaacaatgaccgtgaagtgccaccggacttaaccaagaggcgt
aaagaggaaaatggaacaatgggagtttcaaaacacaaaagtgaaagtccatgtgagtct
ccttacccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
ggcggcgattcttttaaatctgaaaagatggataaaatctcctccggcggcaaaaaggaa
tccaggcatgataaagaaaagatagaaaagaaagaaaaacgggacagttcaggaggaaag
gaagagaagaaacaatatccttttcgttgtaattttttcagtcagtgtaatggaaagctt
tga
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integrated database retrieval system
