KEGG   Trichechus manatus latirostris (Florida manatee): 101345932
Entry
101345932         CDS       T05135                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu01524  Platinum drug resistance
tmu03430  Mismatch repair
tmu05200  Pathways in cancer
tmu05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101345932
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101345932
  09162 Cancer: specific types
   05210 Colorectal cancer
    101345932
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    101345932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101345932
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101345932
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP HORMA
Other DBs
NCBI-GeneID: 101345932
NCBI-ProteinID: XP_012411994
UniProt: A0A2Y9FXZ4
LinkDB
Position
Unknown
AA seq 1358 aa
MSRQSTLYTFFPKSPSLNNANKVPTRPSSGGSTAAATGPSPSRSGDAAWSEAGPGPLAGS
ASPPEAKKLNGGLRRPAAPAVRPSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIR
EKGKSVRIHVQFFDDSPTRGWVSKRLLKPYTGSKAKEAQKGGHFYSAKPEILRAMQSADE
ALNKDKIKRLELAVCDEPSEPEEEEEMEVDATNTSDKHEENNEIESEEEVRPKTQGSRRS
SRQIKKRRVISDSESDVGGSDVEFKPDAKEEGSSDEISSGVGDSESEGVYSPVKVAPKRK
KMVTGNGSLKRKNSRKEMPSATKRATGISSETKSTLSAFSAPQNSESQPVSGGGDDGSRP
TVWYHETLEWLREEKRRDERRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFD
LVIFYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVAR
VEQTETPEMMEARCRKMAHSSKHDRVVRREICRVITKGTQTYSVLEGDPSENYSKFLLSV
KEKEEDCSGHSRVYGVCFVDTSLGKFYIGQFADDRHCSRFRTLVAHYPPVQVLLEKGNLS
AETKMILKSSLSSSLQEGLIPGSQFWDAAKTLRILLEGGYFTEKVNEDSGVMLPQVLKGM
TSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSATRP
GAIFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCHTPFGKRLLKQWLCAPL
CSPFPINDRLDAIEDLMAVPDKISEVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRA
IMYEETTYSKKKIIDFLSALEGFKVMCKIIEVTEEVVDDFKSKLLKQVITLQTKNPEGRF
PDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI
GCRTIVYWGIGRNRYQLEIPESFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAE
ERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAILDVLLCLANYSRGGDGPMCRPVILLP
EDDTPPFLELRGSRHPCITKTFFGDDFIPNDILIGCEEEEDSGKAYCVLVTGPNMGGKST
LMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILT
HATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVENYSQNVAV
RLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKARE
FEKMTKSLRLFREVCLASERSTIDAEAVHKLLTLIKEL
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcaccttgtacaccttcttccccaagtctccttcgctgaataatgcc
aacaaggtcccaaccaggccctcaagcggaggcagcacggccgccgccactgggccctct
ccttcccgcagcggggatgcggcctggagcgaggccgggcctgggcccttggcaggctcc
gcgtcgccgcccgaggcgaagaaactcaacggagggctgcggaggccggcggcccctgcg
gtccgccccagcagttcttgtgacttctcaccgggtgatttggtttgggccaagatggag
ggttacccctggtggccttgcttggtttacaaccacccctttgatggaacattcatccgt
gagaaagggaaatcagtccgcattcacgtacagttttttgatgacagcccaacaaggggc
tgggttagcaaaaggctgttaaagccatacacaggttcaaaagcaaaggaagcccagaag
ggaggtcatttttacagtgcaaagcctgaaatactcagagcaatgcaaagtgcagatgaa
gccttaaataaagacaagattaagaggcttgagttggcggtgtgtgatgagccctccgag
ccagaagaggaagaagagatggaggtagatgcaaccaatacatcagataagcatgaagaa
aataatgaaattgagagtgaagaagaagtacggcctaagacacaaggatctaggcgtagc
agccgccaaataaaaaaacgtagagtcatatcagactctgagagtgacgttggaggttct
gatgtggaattcaagccagatgcaaaggaggaaggaagcagcgatgaaataagcagtgga
gtgggggatagtgagagtgaaggtgtatacagtcctgtcaaagttgctccaaagcggaag
aaaatggtgactggaaatggctctcttaaaaggaaaaattcaaggaaggaaatgccctca
gccactaaaagagcaactggcatttcgtcagaaactaagagtactttgagtgctttctct
gcccctcaaaattctgaatcccagcccgttagtgggggaggtgatgacggtagtcggccc
actgtctggtatcatgaaaccttagaatggcttagggaggagaagaggagagatgaacgc
aggaggcggcctgatcaccctgactttgatgcatccacactttatgtgcctgaggatttc
cttaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaattttgat
cttgtcatcttttataaggtggggaagttttatgagttgtatcacatggatgctctcatt
ggagttagtgaactgggactggtattcatgaaaggcaactgggcccattccggtttccct
gaaattgcatttgggcgctattcagactccctggtgcagaagggttataaagtagctcga
gtggaacagactgagaccccagaaatgatggaggcacgatgccgcaagatggcacacagc
tctaagcacgatagagtggtgaggagggagatctgtagggtcattaccaagggtacacag
acctacagtgtgctggaaggtgacccctctgagaactacagcaagtttcttcttagcgtc
aaagaaaaagaggaagactgttctggtcacagtcgtgtgtatggtgtgtgctttgtcgat
acctccctgggaaaattttacataggtcagtttgcagacgatcgccattgttccaggttc
aggactctagtggcacactaccctccggtccaagtcttgttggagaaaggaaatctctca
gcagaaactaagatgattctgaagagttcattatcctcttctcttcaggaaggtctgata
ccaggctcccagttttgggatgcagccaaaactttgaggattctccttgagggcggatat
tttacagaaaaggtaaatgaggacagtggggtgatgttaccccaggtgcttaaaggtatg
acctcagagtctgattccattgggttgacaccaggagagaagagtgaactcgccctgtct
gctctgggtggttgtgttttctacctcaaaaaatgccttattgaccaggagcttttatcg
atggctaattttgaagaatatattcccttagattctgacatggtgagtgccacaaggcct
ggtgctatctttgctaaagccaatcaacgaatggtgctcgatgcagtgacattaaacaac
ttggagatctttctgaatgggacaaatggttctactgaagggactctgctagagagaatt
gacacttgccatactccctttggtaagcggctcctaaagcagtggctttgtgccccactc
tgtagccccttccctatcaatgatcgactagatgccatagaagacctcatggctgtgcct
gacaagatctcggaggttgcagaccttttaaagaagcttccagaccttgagaggctgctg
agcaaaatacataatgttggatctcccctgaagagccagaaccacccagatagcagggct
ataatgtatgaagaaactacatatagcaaaaaaaagattattgattttctttctgctctg
gaaggattcaaagtaatgtgtaaaattatagaggtaacggaagaagttgttgatgacttt
aagtctaaactccttaagcaggtcattactctccagacaaaaaatcctgaaggccgtttt
cctgatttgactacagaactgaaccgttgggatacagcctttgaccatgaaaaggctcgt
aagactggacttattactccaaaagcaggatttgactcagattatgaccaagctcttgct
gacataagagaaaatgaacagagcctcctggagtatttagagaaacagcgcaatcgaatt
ggctgcaggaccatagtctattgggggattggcaggaaccggtaccagctggaaattcca
gagagtttcaccacccgcaacttgccagaagaatatgagttgaagtctaccaagaagggc
tgtaaacgatactggaccaaaacaatcgagaagaagttggctaatctgataaatgctgaa
gaacggagagatgtgtcattgaaggactgcatgcggcgactgttctataactttgataaa
aattacaaggactggcagtctgctgtagagtgtattgcaatactggatgtcttgttgtgt
ctggcgaactatagccgaggaggtgacggtcctatgtgtcgtccagtaattctgttgcca
gaagatgacactccccccttcttagagcttagaggatcacgccatccctgcattacgaag
actttttttggagatgactttattcctaacgacatcctaataggctgtgaggaagaggag
gatagtggcaaagcttattgtgtgctcgttactggaccaaatatggggggcaaatctaca
ctcatgaggcaggctggcctattagctgtaatggcccagatgggttgctatgtacctgct
gaagtgtgtaggctcacaccgattgatagagtgtttactagacttggtgcctcagacaga
ataatgtcaggtgaaagtacgttttttgttgagttgagtgaaactgccagcatacttacg
catgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgcaacattt
gatgggacagcaatagcaaatgcagttgttaaggaacttgctgagaatataaaatgtcgt
acattgttctctacccactaccattcactagtagaaaattattcgcaaaatgtagctgtg
cgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagccaggagact
attaccttcctctataaattcattaagggagcttgtcctaaaagctatggctttaatgca
gcgaggcttgctaatcttccagaggaggttattcagaagggacacagaaaagcaagagaa
tttgagaagatgacgaagtcactgcggttatttcgggaagtttgcctggctagtgaaagg
tcgactatagatgctgaagctgtccataagttgttgactttgattaaggaactatag

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