Trichechus manatus latirostris (Florida manatee): 101345935
Help
Entry
101345935 CDS
T05135
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04114
Oocyte meiosis
tmu04120
Ubiquitin mediated proteolysis
tmu04218
Cellular senescence
tmu04310
Wnt signaling pathway
tmu04340
Hedgehog signaling pathway
tmu04390
Hippo signaling pathway
tmu04710
Circadian rhythm
tmu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101345935
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101345935
04340 Hedgehog signaling pathway
101345935
04390 Hippo signaling pathway
101345935
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
101345935
04218 Cellular senescence
101345935
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101345935
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101345935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101345935
03036 Chromosome and associated proteins [BR:
tmu03036
]
101345935
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101345935
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101345935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
WDR55
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
NBCH_WD40
F-box
Beta-prop_IFT140_1st
WD40_like
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
F-box_5
WD40_2
DUF4508
PAN_3
DUF6188
Motif
Other DBs
NCBI-GeneID:
101345935
NCBI-ProteinID:
XP_004370105
UniProt:
A0A2Y9D8R6
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLASTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGTAPPNSFYRALYPKIIRDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYVVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTY
TYISR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgctgaggcggtgctgcaggagaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctctgagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacttac
aacagctgtgccagactctgcttaaaccaggaaacagtatgcctagcaagtactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatgattgtg
cccaagcaacggaaactctcagcaagctatgagaaggaaaaggaactgtgtgtcaaatat
ttcgaacagtggtcagagtctgatcaagtagaatttgtggaacatcttatatcccaaatg
tgtcattaccaacatgggcatataaactcatatcttaaacctatgttgcagagggatttc
ataactgctctgccagctcgaggtttggatcacattgctgagaacattctgtcatacctg
gatgccaaatcactatgtgctgctgaacttgtgtgcaaggaatggtaccgagtgacatct
gatggcatgttatggaagaagctcattgagagaatggtcaggacggattctctatggaga
ggcctggcagaacgaagaggatggggacagtatttattcaaaaataaacctccggatggg
actgctcctcccaactcattttatagagcactttatcctaaaattatacgagacattgag
acaatagaatctaattggagatgtggaagacatagtttacagagaatccattgccgaagt
gaaacaagcaaaggagtttactgtttacagtatgatgatcagaagattgtaagcggcctt
cgagacaacacaatcaagatctgggataaaagcacattggaatgcaagcgaattctcaca
ggccacacaggttctgtcctgtgcctccagtatgatgagagggtgatcataactggatca
tcggattccaccgtcagggtgtgggatgtaaatacaggtgaaatgctaaacacactgatc
caccattgcgaagcagttctgcacttgcgtttcaataatggcatgatggtgacctgctcc
aaagaccgttccattgccgtatgggatatggcctccccaactgacattaccctccggagg
gtgctggttggacatcgagctgctgtcaatgttgtagactttgatgataagtacgttgtt
tctgcgtctggggataggactataaaggtatggaacacaagtacttgtgaatttgtaagg
accttaaatggacacaaacgaggcattgcctgtttgcagtacagagacaggctggtcgtg
agtggctcatctgacaacaccatcagattgtgggacatagaatgtggagcatgtttacga
gtgttagaaggccatgaggaattggtgcgctgtattcgatttgataacaagaggatagtc
agtggggcctatgatggaaaaataaaagtgtgggaccttgtggctgctttggacccccgt
gctcctgcagggactctctgtctacggacccttgtggagcattccggaagagttttccga
ctccagtttgatgaattccagattgtcagtagttcacatgatgacacaatcctcatctgg
gacttcctaaatgatccagctgctcaagctgaacccccccgctccccttctcgaacatac
acctatatctccagataa
DBGET
integrated database retrieval system
