Trichechus manatus latirostris (Florida manatee): 101346050
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Entry
101346050 CDS
T05135
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04082
Neuroactive ligand signaling
tmu04721
Synaptic vesicle cycle
tmu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101346050
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101346050
04721 Synaptic vesicle cycle
101346050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmu02000
]
101346050
Transporters [BR:
tmu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101346050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101346050
NCBI-ProteinID:
XP_004376236
UniProt:
A0A2Y9DKC1
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Position
Unknown
AA seq
630 aa
AA seq
DB search
METKPLNSQKEPSACKDGEDCQENGVLRKGVPAPGDKVETDQISNEYSAVASPGTGDDTQ
HSTPAATTALVAEVHQVERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYLELALGQYHRNGCISIWRKICPIFKGIGYTICIIAFYIASYYNTII
AWALYYLISSFTNQLPWTSCKNSWNTGNCTNYFSQDNITWTLHSTSPAEEFYIRHVLQIH
QSKGLQDLGGINWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFISGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDECPHIWAKRREWFVLGVVITCFFGSLVT
LTFGGAYMVKLLEEYATGPAVVTVVLIEAIAVSWFYGVNQFCSDVKEMLGFSPGWFWRIC
WMAISPLFLLFIICSFLMSPPQLRLFQHNYPRWSVILGYCIGTSSFICIPTYIAYRLITT
PGTFKERIIKSITPETPTEIPCGDIRLNVV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaagcccttaaattctcagaaggagccgtcagcctgtaaggatggagaagat
tgtcaggaaaatggagttctacggaaaggtgtccctgccccaggtgataaagtggagact
gaccaaatctccaatgagtactcagcggttgccagccctggtacgggagacgacacccag
cactccaccccagcagccaccaccgccctagtggctgaggttcatcaagtggaacgggag
acctggggcaagaaggtggatttcctcctctcggtcattggctatgccgtggacctgggc
aatgtgtggcgctttccctacatttgttaccagaatggaggaggggccttcctcctcccc
tacaccatcatggccatttttggagggatcccactcttctacctggagctagcgctgggc
cagtaccacagaaacggatgcatttcaatatggcggaaaatctgcccgattttcaaagga
atcggttacaccatctgcatcattgccttctacattgcctcctactacaacactattatt
gcctgggcgctctactacctcatctcctccttcaccaaccagctgccctggacaagctgc
aagaactcctggaacactggcaactgcaccaactacttctcccaggacaacatcacctgg
actctccactccacctctccagctgaagagttttacatacgccatgtcctgcagatccac
cagtctaagggactccaggacctgggtggcatcaactggcagcttaccctctgcatcatg
ctgatctttactgttatctactttagtatctggaaaggcgtcaaaacatctggcaaggtg
gtgtgggtgacagctaccttcccttatatcatcctctctgtcctgctggtgaggggagcc
accctccctggagcctggagaggtgtcctcttttacctgaaacccaactggcagaaactt
ctggagacaggggtgtgggtggatgctgcagctcagatcttcttctctcttggtcctggc
tttggggtcctactggcttttgctagctacaacaaattcaacaacaactgttaccaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcatttcgggatttgtcatcttc
acggtactcgggtatatggctgaaatgaggaacgaagacgtgtctgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
acattctttgccatcatcttcttcttgatgttaatcacgctgggcttggacagcacgttt
gcaggcttggagggggtgatcacggctgtgctggatgagtgtccccacatctgggccaag
cgtcgggagtggttcgtgctcggagtggtcatcacctgcttctttggatccctggtcacc
ctgacttttggaggggcctacatggtgaagctgctagaggaatacgccacggggcctgcg
gtcgtcactgtcgtgcttatcgaagcaattgctgtgtcttggttctatggcgtcaatcag
ttctgcagtgacgtgaaggaaatgctgggcttcagccctggatggttttggaggatctgc
tggatggccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccc
ccacagctacggctcttccaacataattacccccgctggagtgtcatcttgggctactgc
ataggaacctcgtctttcatctgcatccctacgtatatagcttatcggctgatcaccact
ccagggacctttaaggagcgtattattaaaagtatcactccagaaacaccaacagaaatt
ccctgtggggacatacgcttgaatgttgtgtaa
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