Trichechus manatus latirostris (Florida manatee): 101346294
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Entry
101346294 CDS
T05135
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03440
Homologous recombination
tmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101346294
03460 Fanconi anemia pathway
101346294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101346294
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101346294
FA (Fanconi anemia) pathway
Downstream FA components
101346294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
101346294
NCBI-ProteinID:
XP_004373516
UniProt:
A0A2Y9DFL2
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MEEPTGKPLSCEEKEKLKQKLAFLKREYSKTLARLQRAQRAEKIKNSIKKTVEEQSCLLQ
QEIAPRLNHSEPKNKVSPFEKLQISTHLDDETGEKTCITLDIEPESFNLGDGPVEESHLQ
RTDGIQEHFPYRVSDPDGEKRQNKLPGRGKQQQKRTFISQGRESSFDCDSLILSGKRIKE
QEKINRENPQTPVSEIKTHLSSPKHEIPDSPALVTETNERNVLIPPTAKPERDTHGLLRG
NNFPRATTLHLHTPSDTSRGQQLEHIPPKANCELANISTTSPVNLEAQGKKMTVFVNNPV
VNKNVSAGDQVPGSRNLVADNSCFVNELTYNNLLASENQNLKERNHIEKSLKPPSNIPDG
RNESLLENEVLNQSKSFSLESVSPVSTEDQTYSCTMLEGLLFPAEYYVRTTRSMSNRQRN
VALEAVNQSHLDVKKKGFKNKETTENLNLSYEETDQSEIRVSDTWTGQPSSRSPQKIVSL
TEVSRPTRPAKDNDFFRKSVAQPSSRRNRGKRKSTCTPILDDHELILPTSGTSGVTRSKE
EVTLHKYQNEKEIHGKDGRGQKENSLLSRDKAYSLALDRDAFNPLFHKDEMLSLKFLSSF
FKITDFQLPDDDFGLLKLQKLKSCSEKMIESFALKTCAERHLKEGNCTVWEELIPKQIDT
EKEVLEKELIVLPGKAHPKMPNLESQSKKGLSSSILLFTPSNTVAPDDNDRPTADMCSPA
FPILGTTPAFDSQAHYENVSAEVVGHTCYIPQLSQSKDTVSLANDNKQCNSSISPSKLDT
TLHVSDRKGQPNCDSGSQPAPLPMESLTAKGNQLRGSTRLELCNESVEQAEIADLPTCDS
LNPGSLQLISKLKNPSGSCSVDVSTTWWEIAGCKEPCIITACEYVVSLWKPLDTWQWKKV
YTWHFTEVPVLQIVSVPDVCNLVCVALGNLEIREIRALLCSSNDGSEKQLLLKSGNIKAV
LGLTKRRLVSSSGTLCDQQVEIMTFAEDGGSKEKQFLMPPEETILTFAEVQGMPEALLGT
TIMNSIVIWNLKTGQLLKKMHMGDSCQASVCHKAYSEMGLLFVVLSHSCAKESEWLGSPV
FQLIVINPKTTLSVDMMLYCLPQGKAGRFLEGDVKNNFAAAVLTSGTIAIWDLLLGHCTA
LLPPVSDQNWSFVKWSDTDSYLLAGQKDGSIFVYRCL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctaccggaaagcccctcagctgtgaggagaaggaaaagttgaagcaaaaa
ctagcattcttgaaaagggaatacagcaagacactggcccgccttcagcgtgcccagaga
gctgagaagattaagaattctattaagaaaacagtagaagaacaaagttgcttgcttcag
caggaaattgcgccacggctaaaccactcagaacctaaaaataaagtatctccttttgaa
aaattacaaatcagcacccatcttgatgatgaaactggagaaaagacatgtatcaccctt
gatattgagcctgagtcatttaaccttggagatggcccagtggaagaatcacatctacaa
agaacagatggtatccaagaacattttccctacagggtcagtgaccctgatggtgagaaa
aggcagaataagctgccagggagaggaaagcagcagcagaaaagaacatttatttctcag
gggagagaatcttcctttgactgtgattcacttatactctctggaaaaagaataaaggaa
caggaaaaaatcaatagggaaaatcctcagactccagtatctgaaataaaaactcacctt
tctagtcctaagcatgaaattccagattctccagcattagttacagagactaatgaaagg
aatgtattaattccaccaactgccaagccagaaagagatactcatggactcttaagaggg
aataatttccccagggcaactacacttcatttgcatactccctcagatactagtagaggc
cagcaacttgaacacatacctcctaaagctaactgtgagcttgctaacattagcactact
tcacctgtaaacttagaggcccaaggtaaaaaaatgactgtctttgtaaataacccagtg
gtaaataaaaatgtaagtgcaggtgaccaggtgcctggaagccgtaacttagtggcagat
aattcatgttttgtaaatgagctcacttacaataacttattggcaagtgaaaaccaaaac
ttaaaagaacggaatcacattgagaagtctttaaaacctcccagtaatattcctgatggt
agaaatgaaagtcttctggagaatgaggttctaaatcaatctaagagttttagcctggaa
tcagtctctcctgtttctacagaagatcaaacatattcttgtacaatgcttgaaggtctt
ctatttcctgcagaatattatgttagaacaacacgaagcatgtcaaatcgccaaaggaat
gtagccttggaagctgtaaatcagagtcatttggatgtcaagaagaaaggatttaaaaat
aaggagacaactgaaaatttaaacctttcctatgaagaaactgaccaaagtgaaattagg
gtatctgacacatggacaggacaaccaagttcaagaagtcctcagaaaattgtctcatta
actgaggtcagccgtcccaccagacctgctaaagataatgacttttttaggaagtcagtt
gcccagccatctagtagaagaaacagaggaaaaagaaaatcaacatgcaccccaatattg
gatgatcatgaacttattttgccaacttctggcacatcaggtgttaccagatccaaggaa
gaagtcaccttgcacaaatatcaaaatgaaaaagaaattcatgggaaggatggtcgtggt
caaaaagagaactcccttttatccagagataaggcttattctttagctttggatcgtgat
gctttcaatcctctatttcataaggatgaaatgctaagtttaaagtttctgtcatctttt
ttcaaaatcacagactttcagttacctgatgacgacttcggactgcttaagctccaaaaa
ctgaagtcctgctcagaaaaaatgattgagtcttttgcattgaaaacatgtgcagagagg
catcttaaagagggaaattgtactgtttgggaggaactgattcctaaacagatagataca
gaaaaggaagtcttggaaaaggaactcattgttctaccaggaaaagcacatcctaaaatg
ccaaacttggaaagccagtctaagaaggggctctcttcatccatattacttttcactcct
tcaaacactgttgcacctgatgataatgacaggcctacagcagatatgtgttcacctgcc
ttccccatcttaggcactactccagcttttgactcccaggcacactatgaaaatgtgtct
gcagaggttgttggacatacttgctatattccccaactctctcagtcgaaagacacagtc
agtcttgctaatgataacaaacaatgcaacagttcaatcagtccctcaaaattggatacc
acccttcatgtgtcagataggaaaggacaaccaaactgtgactcgggctcccaacctgca
cctctccccatggagtcattaactgccaaaggaaatcagctacgtggaagtacacgcctg
gagttgtgtaatgagtcagttgaacaggctgaaatagcagaccttcctacttgtgatagc
ctaaacccaggcagcctacaattgatttctaagttaaagaatccttcaggatcctgttcc
gtggatgtgagtaccacttggtgggaaatagctggttgtaaagagccatgcatcataact
gcttgtgaatatgtagtttctctttggaaacctctggatacttggcagtggaaaaaagtt
tatacctggcacttcacagaggttccagtattacaaatagtttcagtgcctgatgtttgt
aatcttgtgtgtgtggctttgggaaatttggaaatcagagaaatcagggcattactttgt
tcctctaatgatggaagcgaaaagcagttgctactgaaatccggaaatatcaaagctgtt
cttggcctgacaaagaggaggctggtcagcagcagtgggaccctttgtgatcaacaagta
gaaatcatgacatttgcagaagatggaggaagcaaagaaaaacagtttttgatgcccccc
gaagagactatactaacttttgctgaggtccaaggaatgccagaagctctgcttggtacc
accataatgaacagcattgttatttggaatttaaaaactggtcagctcctgaaaaagatg
cacatgggtgattcctgccaggcttcagtctgtcacaaagcctattctgaaatggggctc
ctgtttgttgttctgagtcactcttgtgccaaagagagtgagtggctgggaagccctgtg
tttcagctgattgtgattaaccccaagacgaccctgagtgtggatatgatgctctactgt
cttcctcaagggaaggctggcaggttcctggaaggtgatgtgaaaaataattttgcagca
gcagtattgacttctggaacaattgccatttgggacttacttctgggtcattgcactgct
ctccttccacctgtctctgaccaaaactggtctttcgttaagtggtcagataccgattct
tatttgctggctggacagaaagatggaagtatatttgtataccgctgcttataa
DBGET
integrated database retrieval system
