Trichechus manatus latirostris (Florida manatee): 101346358
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Entry
101346358 CDS
T05135
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03410
Base excision repair
tmu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101346358
03450 Non-homologous end-joining
101346358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101346358
Enzymes [BR:
tmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101346358
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
101346358
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
101346358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
BRCT_2
NTP_transf_2
HHH
BRCT
PTCB-BRCT
RTT107_BRCT_5
LIG3_BRCT
SUKH-3
Motif
Other DBs
NCBI-GeneID:
101346358
NCBI-ProteinID:
XP_004370107
UniProt:
A0A2Y9D9D1
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MTVALINPQTERPGYSHTSMDPRGILKAFPKRKQIHANPSSKALAKMPKREDGEEAGEWL
SSLRAHVVPTGIGRARAELFEKQIAQHGGQICPAQAPGVTHIVVDESMDCERALRLLKLP
RLPMGAQLVKSAWLSSCLQERRLVDTAGFSIFIPNRYLYQPQPSKANQDSSSPPGPHEGL
LGTPLSLPPPPTRPVSPFQKAEETPSTQAQPGSDDESSDGEETQVSAADLEILISGHYPT
LLEGDGEPSPTPEALDKWVCAQPSSQKATNHNPHITEKLEVLAKAYSVQGDKWRALGYAK
AINALKSFHKPVTSYQEACSIPGIGKRMAEKIVEILDSGHLRKLDHISESVPVLELFSNI
WGAGTKTAQMWYQQGFRSLEDIHSQVSLTAQQAIGLKYYDDFLERMPREEAAEIQQTVQE
SAQALNPGLLCVACGSYRRGKATCGDVDVLVTHPDGWSHQGIFSRLLDSLRQRGFLTDDL
VSREENGQQQKYLGVCQLPGPRQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAK
TKGMSLSEHSLSTAVVRDNHGLKVGPGWVLPTPTEKDIFRLLGLPYREPAERDW
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgccctgatcaaccctcagacagaaaggccagggtacagccatacctccatg
gaccccaggggcatcctgaaggcatttcccaagcggaagcaaattcatgccaatccatca
tcaaaagcacttgcaaagatgcccaagagggaagacggagaagaagcaggagaatggctg
agctccctgcgggcccatgttgtgcccactggcattgggcgagctcgggctgaactcttt
gagaagcagattgcccagcacggtggccagatatgccctgcccaggccccaggggtgact
cacattgtggtggatgaaagcatggactgtgagcgggccctccgtctccttaaactgccc
cgactgcccatgggtgcccaactggtgaagtcagcctggctgagctcatgccttcaggag
agaaggctggtggacacggcaggattcagcatcttcatccccaacagatacctgtaccaa
ccacagcccagcaaagccaaccaagactcttctagtcctcctggtccccatgaaggtctg
ctcgggacacccctgtctcttccccctcctcctaccagacctgtatctcctttccagaag
gcagaagagacaccaagcacccaagcccagcctggctctgatgatgaatccagtgatgga
gaagagacccaggttagcgcagctgatctggaaatcctgatcagcggccactaccctacc
ctccttgagggagatggtgagcctagcccaacccctgaggccttggataagtgggtctgt
gcacagccttcaagccagaaggcaaccaaccacaacccccacatcacagagaagctggaa
gtgcttgccaaagcctacagtgttcaaggagacaagtggagggccctgggctatgccaag
gccatcaatgccctcaagagcttccacaagcctgtcacctcttatcaggaggcctgcagt
atccctggaattgggaagcggatggctgagaagattgtagagatcctggacagtgggcat
ctgcgaaagctggaccatattagtgaaagcgtgcctgtcttagagctcttctccaacatc
tggggagctggaaccaagactgctcagatgtggtaccaacagggcttccggagcctggaa
gacatccacagccaggtctccctgactgcacagcaggccatcggcctgaagtattacgat
gacttcctggaacgcatgcccagggaggaggctgcagagatccagcaaacagtccaagaa
tcagctcaggccctcaaccccgggctgctgtgtgtggcatgtggttcctaccgacggggg
aaggccacctgtggagatgtggatgtgctggtcactcacccagatggctggtcccaccag
ggcatcttcagtcgcctccttgacagcctccggcaacgaggtttcctgacagatgacttg
gtgagccgggaggagaacggccagcagcagaagtacttgggtgtgtgccagctcccaggg
cccaggcagcggcaccggcggctggacatcatcgttgtgccctacagcgagtttgcctgt
gccttgctctacttcaccggctctgcccacttcaaccgctccatgcgggctctggccaag
accaagggcatgagcttgtcagagcattcgctcagcacggccgtggtcagagataaccat
ggtctcaaggtggggcctggctgggtgctgcctacccccactgagaaggatatcttcagg
ctcctaggcctcccctaccgagaaccggctgagcgagactggtga
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integrated database retrieval system
