Trichechus manatus latirostris (Florida manatee): 101346364
Help
Entry
101346364 CDS
T05135
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101346364
Transcription factors [BR:
tmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101346364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101346364
NCBI-ProteinID:
XP_004371314
UniProt:
A0A2Y9DBM8
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MERARPEPPPQPRQLPRATPPRPLRPAPPPLPVEGTSFRTAAVEASPSPPALCAAAIATV
ASSCGEAPASGAQPATPARRLLEVKPEQVLLLPQPRDEVAASPAQARLLQLRPELLPLQQ
PPASEGAPCRSEVHPVQPRALHVKAEKQEPGPGLEPSVGPRRVVEAGPRPSRVAKVEGPG
SALNSRRGDEKKDKLETEEVMRDVGKGGEGKSLVTIREGVIKTEEPERFREDCRLSSEPA
SNGLIHGSKEVILAQPASGFGSHQQDLRIPLTLHTVLPGARIQFQGPPPSELIRLTKVPL
TPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIH
RPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPG
KRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGEAPPAIQL
PTPTVQRPSPITLFQPSVSSTAQVAVQAPSLPLCPAVPPQRFAGPSQTDTHRLHSGTSHS
VKRPTPVSLESTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRNAPIPQAPPIPHSHV
YQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLGY
YEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNSHSHSGEEYLNPM
PQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgcctcagccgcgccaactgccgcgggcgaccccg
ccgcgcccgttgcgccccgctccgcccccgctgccggtcgagggtacctcctttcggaca
gcagccgtcgaggcctctccgtcgccgcccgccttgtgtgccgctgccattgccaccgtg
gcctcgtcgtgcggagaggccccggcgtcgggcgcacagcctgcaacaccagcacggcgg
ctgctggaggtgaaaccagagcaggtgctgctgctacctcagccgcgggacgaagtcgct
gcttcgcccgcgcaggcgcgattgctgcagctgagacccgagcttctgccgctgcagcag
ccgcccgcgtccgagggcgccccctgcaggtccgaagtgcacccggtgcagccccgagcg
ctgcacgtcaaggccgagaagcaggagcccggacccggcttggaaccgtcggtggggcct
cggagggtcgtcgaggcgggacccaggccttcccgagtggccaaagtggaaggccccggg
tcagctctcaacagccgccgaggggacgagaagaaggacaagttggagacggaggaggtc
atgagagacgtggggaaaggcggtgaaggcaaaagcctggtgaccattagagaaggagtc
atcaaaaccgaggaacccgagagattccgcgaggactgcaggctcagctcggagcctgcg
tccaatggcttgatccatggcagcaaggaagtcatcctggcccagccagccagtggcttt
gggtcgcaccagcaagacctcaggatccctttgactctccacaccgtcctccctggggct
cggatccaatttcagggacctccaccttcagagctgataagattgaccaaggttcccctg
acaccagtgcctattaaaatgcagtccttactggagccttctgtaaaaattgaaaccaaa
gatgtcccgctcaccgtgcttccctcagatgcaggaataccagatactcccttcagtaag
gacagaaatggtcatgtgaagcgacccatgaatgcatttatggtttgggcaaggatccac
cggccagcactagccaaagctaacccagcagccaacaatgcagaaatcagtgtccagctc
gggttagagtggaacaaacttagtgaagaacaaaagaaaccttattatgatgaagcacaa
aagataaaagaaaagcacagagaggaatttcctggttgggtttatcagcctcgtccaggg
aagcgaaaacgcttccctctaagtgtttccaatgtattttctggtaccacacagaatatc
atctctacaaatcctacaacaatttatccttatcgctcacctacctactcggtggttatt
cccagcctgcagaacaccatcactcatccagttggtgaagccccacctgccatccagctg
cccacacctacagtccagcgcccaagccccatcacactcttccagcccagtgtctccagt
actgcccaggtggctgtccaggctccaagtctgcccctctgtccagcagtcccaccccag
cgctttgctgggccctcccaaacggacactcatcggctgcattctggaaccagtcattct
gtgaagagacccacccctgtctctctagagagtaccaacaggattccaactagtgcaagt
actgcccatgccagatttgcaacttctaccatccaacctcccaaggagtatcccagtgtt
tcgacttgtcccagaaatgctccaatcccccaggctcctcccattccacactcacatgtc
taccagccccctcccctgggccatccagccacactgttcgggacaccaccgcggttctct
tttcatcacccctacttcttacctggacctcactacttcccatcaagcacgtgcccttat
agtcgtcctccctttggctatggaaattttccaagttcaatgccagaatgccttggttat
tatgaagacaggtaccaaaaacatgaggctatgttttcggctttaaatagagactatcct
tttagagactacccagatgaacgcacacacagtgaagactctcggagttgtgagagcatg
gatgggacctcttactataacagtcatagccacagtggggaagaatacttaaatcctatg
cctcagctggacattggagccttggagaatgtcttcacagccccgacatcaactccctct
agcatccagcaagtcaatgtcactgacagtgatgaggaggaagaagaaaaagtgctcagg
aatttataa
DBGET
integrated database retrieval system
