Trichechus manatus latirostris (Florida manatee): 101346396
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Entry
101346396 CDS
T05135
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101346396
Transcription factors [BR:
tmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101346396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101346396
NCBI-ProteinID:
XP_004378213
UniProt:
A0A2Y9DQ90
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MKGNNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGA
DGLEQDVGETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAV
LDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRD
LPSPKKAKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALSTPEVPSGTCRPDVPESPDSR
QKSPLFQFAEISSSTSHSDVPSKQCQASALLQFAEISSNTSQLGGAEPGKRYGKSALFQL
AEMCLASEGVKIEESKQIKTKESDGGRIKELEKGKEEREIKVEKTDEGNLQKEAEFEKSA
KENVRDSKDLRNFEELQVDNIMAIKMEDPKEIKKEELEEDQKCSLFPDFSYSASSKIIIS
DVPSRKDHMCHPHGIMIIEDPTALNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSE
SDIESVIYTIEAVAKGDWGIEKLGEAPRRKVRTSSSGKGSLLDAKPPKKKVKSREKKMSK
EKLSDTTKESKLPDFISLSASKSISGEVPEGIKAEPLTPMEDALPPSLSGQAKPEDSDCH
RKTETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWNEESW
TFNQSGTSGSKKFKKTKTKEDSLLGSTKLDEEFEKKSNSLPQYSPVTFDRKYVPVPRKKK
KTGNMSSEPAKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSNRQLFLDAI
HPTEAIFSEEKNTTEPAYKVKNAPSIPNTPEPTITQEPLVGSQKRKARKTKITHLVRTAD
GRVSPAGGTLDDKPKEQLQRSLPKTAETDCNDECLHHSEAAGTRSSTPDMPAVSAFFSLA
ALAEVAAMENVHRGQRTTPLTHDGQPKEMPQAPVLISCADQ
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaataatagaaataaagatcattcagcagaaggagaaggggctggaaaacga
ccaaaacgaaagtgtctgcagtggcatccattgctagcaaagaaacttcttgacttttca
gaagaggaggaagaggaagacgaagaggaggatattgataaggttcaacttcttggggcc
gatggcctagagcaagatgttggtgagactgaagatgatgaatcaccagaacagcgagcc
cggagaccaatgaatgcatttctcttattttgcaaacgccatcgctcccttgtacgtcag
gaacaccccaggcttgataaccgaggtgctaccaagatactagctgattggtgggctgtt
cttgatccaaaggaaaagcagaagtacacagacatggccaaggagtataaagatgcattt
atgaaagcaaaccctggctacaaatggtgtcctacaacaaacaagcctgtgaaatctcca
acacccactgtcaatccacgaaagaaactatgggccttcccatctgactcttcaagggac
ttgccaagccccaagaaagcgaagactgaagaaatgcctcagcttaactttggaatggct
gatcctactcaaatgggaggcctaagcatgctgcttttagctggagaacatgctcttagc
actccagaggttccctcgggcacttgcaggcctgatgttccagaatcccctgactctcgt
cagaagtcaccattgtttcagtttgctgagatatcttcaagtacatcccactcagatgtg
ccctccaaacagtgtcaggcatcagccttgcttcagtttgcagagatttcttcaaacact
tcgcagttgggtggtgctgagcctggaaaacgctatgggaagtctgcactctttcagctg
gcagagatgtgcctggcatcagagggggtgaaaatagaagaatcaaagcaaataaaaaca
aaagaatcagatggtggaagaattaaagaactggagaagggaaaggaagaaagagaaata
aaagtggagaaaacggatgaaggcaatttacagaaggaggcagaatttgaaaaatcagct
aaggaaaatgtaagagattctaaggacttaagaaattttgaggaactgcaagtggataat
ataatggctataaaaatggaagatcccaaagaaataaaaaaggaagaactagaagaagat
caaaagtgtagtcttttccctgatttttcttactctgccagtagcaagataataataagt
gatgttcccagtagaaaggatcacatgtgccatcctcatggaattatgatcattgaggat
cccacagcattaaacaaacctgaaaaactaaaaaagaagaagaagaaaagcaaaatggat
cgacatggaaatgataagtccacacccaagaagacttgcaagaagaggcagtcttctgag
tctgacatcgagagtgtcatatacaccattgaagccgttgcaaagggagactggggcatt
gagaaacttggagaagcccctcgcaggaaggtccgcacatcctcaagtggcaagggaagc
cttttggatgccaagccaccaaagaaaaaagtgaaatcaagagagaagaaaatgtcaaag
gagaaactctcagacactaccaaagagtcaaaacttccagatttcattagtctttctgcc
agcaagagcatttctggtgaggtgccagagggtataaaagcagaaccgttgacccccatg
gaggatgcactaccacccagcttatcgggacaggccaaacctgaggacagtgactgtcac
agaaaaacagagacttgtggctccaggaaatccgagaggtcttgcaaaggtgctctttac
aaaaccctggtgtctgagggcatgctcacctctctgcgagctaatgttgacagaggaaaa
cgaagctcaggaaaaggaaactcatctgatcatgaagggtgttggaatgaagaaagttgg
acatttaaccagagtgggaccagtgggagcaaaaagttcaagaagactaagacaaaggaa
gattctctccttggctcaacaaagctggatgaagaatttgaaaaaaagtccaacagcctc
cctcaatatagtcctgttacatttgaccggaaatatgttccagtcccaagaaaaaagaag
aagactgggaatatgtcctcagaaccagctaaaaccagcaaaggtccattccagtctcag
aaaaagaacttattccacaaaattgtcagcaaatataagcacaaaaaggagaagcctaat
gttccagaaaaaggaagtggggataaatggtcaaacaggcaactcttcttggatgccatt
caccctacagaagccatattttcagaagaaaaaaacaccacagagcctgcttataaggtt
aaaaatgccccgtccattcccaacactccagagccaacaataacgcaagaacctttggtg
ggcagccaaaagagaaaagcaaggaaaaccaagatcacacaccttgtcagaacagcagat
ggccgggtatcaccagcaggaggtactttggatgacaaaccaaaggaacaactgcagagg
agtctccctaagacagccgagacagactgcaatgacgagtgcttacaccacagcgaggcg
gcggggacacggagcagcactccagacatgcctgctgtgtctgcgttcttcagccttgct
gcgctggcagaggtggcagccatggaaaatgtgcacagaggtcagaggacaactccgctc
acccatgacggacagccaaaagaaatgccacaggctcctgtccttatttcctgcgctgac
cagtga
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