KEGG   Trichechus manatus latirostris (Florida manatee): 101346435
Entry
101346435         CDS       T05135                                 
Name
(RefSeq) autophagy-related protein 13 isoform X1
  KO
K08331  autophagy-related protein 13
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04136  Autophagy - other
tmu04140  Autophagy - animal
tmu04211  Longevity regulating pathway
tmu05010  Alzheimer disease
tmu05014  Amyotrophic lateral sclerosis
tmu05016  Huntington disease
tmu05017  Spinocerebellar ataxia
tmu05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101346435
   04136 Autophagy - other
    101346435
 09150 Organismal Systems
  09149 Aging
   04211 Longevity regulating pathway
    101346435
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101346435
   05014 Amyotrophic lateral sclerosis
    101346435
   05016 Huntington disease
    101346435
   05017 Spinocerebellar ataxia
    101346435
   05022 Pathways of neurodegeneration - multiple diseases
    101346435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tmu04131]
    101346435
   03029 Mitochondrial biogenesis [BR:tmu03029]
    101346435
Membrane trafficking [BR:tmu04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    101346435
   Atg1 complex
    101346435
Mitochondrial biogenesis [BR:tmu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    101346435
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 101346435
NCBI-ProteinID: XP_023597587
UniProt: A0A2Y9RSP9
LinkDB
Position
Unknown
AA seq 480 aa
METDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSTSPMHPCNYRTAGEDTGL
TYPSVEDSQEVCTTSFSTSPPTQLMVPGKEGGLPLAPNQPAHGAQADQERLATYTPSDGA
HCAATPSSSEDTETVSNSSEGRASPNDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMF
APKNLELEDADPMVNPPDSPETGSPLQGSLHSEGSSGGSSGNTHDDFVMINFKPAFSKDD
ILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggaaactgatctcagttcccaggacaggaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggcgagaagatttgtactcgt
tcatcctcatccccaacgggttcagattggttcaacttagcaatcaaggacatcccagag
gttacacatgaagctaagaaggcactggcagggcagctgcctgctgtcggaaggtctatg
tgtgtggaaatctcactcaagacttctgagggagattccatggagctggaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacggtatacaacaga
ctgtccttgctcctgaagtctctccttgctataactagggtgacaccagcctacaggctc
tccagaaaacaagggcatgagtatgtcatattgtacagaatatattttggggaagtgcag
ctgaatggcttaggagaaggcttccaaacagttcgtgttgggacagtgggcactcctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtctaccaggcaa
tttgagagaaccccacctatcatggggattatcattgatcactttgtggaccgtccctat
cccagcacctcgcccatgcacccctgcaattacagaactgctggtgaggacactggactt
acatacccatctgtggaagactctcaggaagtgtgtaccacctctttttccacctcccct
ccaacccagctaatggttcctgggaaggaaggcgggctaccacttgctcccaaccagcct
gcccacggcgcccaagctgaccaggagagattggcaacctacaccccttctgatggggcc
cactgtgctgccacaccttcaagcagtgaggatactgaaaccgtgtcaaacagcagtgag
ggacgggcctcccccaacgatgtcttggagaccatctttgtccggaaagtgggagctttt
gtcaacaaaccaatcaaccaggtgaccctgaccagtttagacatcccctttgccatgttt
gctcccaagaatttggagctggaggatgctgatcccatggtgaaccctccagattcccca
gagactggatctcctctccaaggcagcctgcactctgagggctccagcgggggtagcagt
ggtaatacccatgacgacttcgtgatgatcaactttaaaccagctttttctaaagacgac
attcttccaatggacttggggaccttctatcgtgaatttcagaacccccctcagctgagc
agcctctccatagacattggcgcacagtccatggctgaggacttggactcattaccagag
aagctggctgtgcatgagaagaatgtcagagaatttgatgcctttgtagaaaccctgcag
taa

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