KEGG   Trichechus manatus latirostris (Florida manatee): 101346520
Entry
101346520         CDS       T05135                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X2
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03030  DNA replication
tmu03410  Base excision repair
tmu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101346520
   03410 Base excision repair
    101346520
   03420 Nucleotide excision repair
    101346520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmu03032]
    101346520
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101346520
Enzymes [BR:tmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101346520
DNA replication proteins [BR:tmu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    101346520
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      101346520
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 101346520
NCBI-ProteinID: XP_004385073
UniProt: A0A2Y9E0Y8
LinkDB
Position
Unknown
AA seq 2256 aa
MVLQNSGRRRVEPVGDGEANRDDGSSSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPVGLPYKPYFYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVG
LKRNYIKLSFNTVEDLVKVRKEISPAVRKNREQDNASDTYTAMLSSVLQGGGVMTDEEEA
SKRIADQMDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAFPVEITRRDDLVERP
DPVVLAFDIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPE
YEGPFCVFNEPDEFHLIQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAAHGLSMYQEI
GFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRM
ATEQPQTLATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMV
QAFHANIIFPNKQEQEFNKLTDDGHVLDAETYVGGHVEALESGVFRSDIPCRFRMNPAAF
DFLLQRVEKTMRHAIEEEEKVPIEQVINFQEVCDQIKIRLTSLKDVPNRIECPLIYHLDV
GAMYPNIILTNRLQPSAMVDEATCAACDFNKPGANCQRKMAWQWRGEFMPASRSEYHRIQ
HQLESEKFPSLFPEGPTRAFHELSREEQAKYEKRRLADYCRKAYKKLHVTRVEQRLTTIC
QRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAVEMGDAAEVKRCKNMEILYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPLELDTDGIWCV
LPNSFPENFVVKTTNVKKPKVTISYPGAMLNIMVKEGFTNHQYQELAEPSSLTYVTRSEN
SIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQS
SVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRKLEDYG
EQKSTSISTAKRLAEFLGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFHAEPTVRK
HFLRKWLKSSSLQEFDIRTVLDWDYYIERLGSAIQKIITIPAALQQVKNPVPRVRHPDWL
HKKLLEKNDVYKQKKISELFVLEGKRQVVMNQAPEDSQSPGPSDMEDFGLTKPPRTAVPV
VTKRKRVLWESQEESQELELTVPWQEILGHPPALGTTQEEWLVWLRFHKKKWQLQARQRL
ARRKRQRLEGTQSAPRAGALREGPATGLGSFLRRAARSILDLPWQIVQISETSQPGLFRL
WAVIGSDLYCIRLSIPRVFYVNQRVAKAEEGPSYRKVNRVLPRANVVHNLYEYSVPEDMY
QEHINEINTELSAPDIEGVYETQVPLLFRALVQLGCVCVVNKQLVRHLSGWEAETFALEH
LEMRSLAQFSYLEPGSIRHLYLYHHAQGHKALFGVFIPTQRRASVFVLDKVRSNQMPSLS
AVYSSEHSLLLEQVGPEFLPPPKHTFEVRAETDLKTICRAIQRLLLAYKEERRGPTLVAV
QSSWELRRLAGEVPVLEEFPLVPVRVADKVSYAVLDWQRHGARHMIRHYLHLDTCLSQAF
EMSRYFHIPVGNLPEDISTFGSDLFFARHLQRHSHLLWLSPTSRPDLGGKEADDSRLVME
LEDHATVEINSSGCYSTVCVELDVQNLAVNTILQSHRINDMEGAASAGISFDAIPQASLE
DMITGNQAASMPASYDETALCSSTFRILKSMVVGWVKEITQYHNVYADNQVMHFYRWLRS
PSSLLHDPALHRTLHSMMKKLFLQLIAEFKRLGSSVIYANFNRIILCTRKRRIEDALAYV
DYITNSIHSKEIFHSLTISFSRCWEFLLWMDPSNYGGIKGKVSPSIHCGQQESPEGEEAE
REQEEEEEEEEEEEESLEEARVEDLLENNWNILQFLPQAASCQSYFLMIVSAYIVAVYHS
MKEELRRSAPGSTPVKRRGASQFSQEAEGAAGALPGMITFSQDYVANELTQNFFTITQKI
QKKVTGSRNSTEPSEMFPQLPGSHLLLNNPALEFIKYVCKVLSLDTNITNQVNKLRRDLL
RLVGVGEFSQEAQFRDPCRSHVLSEVICHSCNFCRDLDLCKDSTFSQDGAVLPQWLCSNC
EVPYDPTVIEAALVDALQKKLMAFTLQDLVCLKCSGVKETHMPIHCSCAGDFALTMHTKV
FMEQVGIFRNIAWHYGMSYLLETLEWLLQKTPPPSR
NT seq 6771 nt   +upstreamnt  +downstreamnt
atggttctgcagaacagcgggcggcggcgcgtggagcctgtcggggacggcgaggccaac
cgggatgatggctcctcttcctcagtctcggcgcttaagcgcttggagcgaagccagtgg
acagataagatggatttgcgatttggttttgagaggctgaaggagcctggagagaagacc
ggctggctcatcaacatgcatcctgtggggttaccctataagccatatttctacattgca
accagaaagggttgtgaacgggaagtttcatcttttctctccaagaagtttcagggtaaa
attgctaaagtggagaccgtccccaaagaagatctggacttgccaaatcatttagtgggt
ttgaagcgaaattacattaaactgtcctttaacacggtggaggatcttgtcaaagtgagg
aaggagatttcccctgcagtgaggaagaaccgagaacaggacaatgccagcgacacctac
acagctatgctctccagtgttctgcaaggaggtggagtaatgactgatgaagaggaagcc
tctaaaaggatagctgaccagatggacaacattgtagacatgcgagagtatgacgtccct
taccacatccgcctctccattgacctgaagatccatgtggctcactggtacaatgtcaga
taccggggcagtgcctttccagtggaaatcacccgccgagatgacctcgttgaacgacct
gaccctgtagttttggcatttgacattgaaacaactaaattacctctcaagtttcctgat
gctgagactgaccagattatgatgatttcttacatgatcgatgggcagggctacctgatc
actaacagggagattgtttcagaagatattgaagactttgagttcacccccaagccagaa
tatgaagggccgttctgtgtcttcaatgaacccgatgagtttcatctcatccagaggtgg
tttgagcacgtgcaagagaccaagcccaccatcatggtgacctacaacggagacttcttt
gactggccatttgtggaggccagagcggctgcgcatggactgagcatgtaccaggagata
gggttccagaaggacagccaaggggagtacaaggccccccagtgcatccacatggactgt
ctcaggtgggtgaagagagatagctatcttcctgtgggcagccacaacctcaaggcagct
gccaaagccaagctgggctacgaccctgtggagctggaccctgaggacatgtgccgcatg
gccaccgagcagccccagaccctggccacgtactcagtgtcggacgcggtggccacgtac
tacatgtacatgaagtatgtccaccccttcatctttgcgctgtgcaccatcatccccatg
gagcccgatgaggtgctgcggaagggatctggaactttgtgtgaggccttgctgatggtc
caggctttccatgccaacatcatcttccccaacaagcaagagcaggagtttaacaagctg
acagacgatggccacgtgctggatgctgagacctacgtgggtggccacgtggaggccctc
gagtctggagtgttccgcagtgacatcccctgccggttcaggatgaaccctgctgccttc
gacttcctgctgcagcgggtcgagaagaccatgcgccatgccattgaggaggaggagaag
gtacccatcgagcaggtcatcaacttccaagaggtgtgtgaccagatcaagatcagactc
acctccctgaaagacgttcctaatcgaattgagtgtccccttatttaccaccttgacgtg
ggggccatgtaccccaatatcattcttaccaaccgcctacagccctccgccatggtggat
gaggccacctgtgctgcttgtgactttaacaagcccggagcaaactgccagcggaagatg
gcctggcagtggaggggcgagttcatgccagccagccgcagcgagtaccaccgcatccag
caccagttggagtcagagaagttcccttccctgttcccagaggggcccacccgggcattc
cacgaactgtcccgggaggagcaggccaagtatgagaagcggaggctggcagattattgt
cggaaggcgtacaagaagctccatgtcacccgagtggagcagcgcctcaccacaatctgc
cagcgggagaactccttctatgtggacacagttcgcgccttccgggaccggcgctatgag
ttcaaagggctgcacaaggtgtggaagaaaaagctgtctgcagcagttgagatgggtgac
gcggccgaggtgaagcgttgcaagaacatggagatcctgtacgactccctgcagctggcc
cacaagtgcatcctcaactccttctacggctacgtcatgcgcaagggggcgcgctggtac
tccatggagatggccggcatcgtgtgcttcacaggagccaacatcattacccaggcccgg
gagctcattgagcagattgggcggcccttggagctggacacagatggaatatggtgtgtc
ctgcccaatagtttcccagaaaactttgttgtcaagacgaccaacgtgaagaagcccaag
gtgaccatctcctaccctggggccatgctaaacatcatggtcaaggagggcttcaccaac
caccagtaccaggagcttgcagagccctcctcgctcacctacgtcacccgttctgagaac
agcatcttctttgaagtcgatggaccctaccttgccatgatcctcccggcctccaaggaa
gaaggcaagaagctcaagaagaggtatgctgttttcaatgaggacggatccctggcagag
ctcaagggcttcgaggtcaagcggcgtggggagcttcagctaattaagattttccagtcc
tcggtgtttgaggccttcctcaaaggcagcacactggaggaggtgtatggctcggtggcc
aaggtggccgactactggctggacgtgctgtacagcaaggcagccaacatgccagattca
gagctgtttgagctcatttctgagaaccgctccatgtctcggaagctagaggactacggg
gagcagaagtccacctccatcagcacggccaaacgcctggccgagttcttgggcgaccaa
atggtcaaggatgcagggctgagctgccgctacatcatctcccggaaacctgagggctcg
cctgtcacggagagggccatccccctggccatcttccacgcagaacccacagtgaggaag
cactttctccggaaatggctcaagagctcttccttgcaggagtttgatattcggacggtt
ctggattgggactactacattgagcgactgggaagcgccatacagaagatcatcacaatt
cctgcagctctgcagcaggtgaagaacccagtgccgcgagtcagacaccccgactggctg
cacaagaagctgctggagaagaacgacgtctacaagcagaagaagatcagcgagttgttt
gtccttgagggcaagagacaggtcgtgatgaaccaggctccagaggacagtcagagccct
ggcccttctgacatggaggacttcggccttacgaagcctccacgtacggcagttcctgtt
gtcactaaaaggaagcgggtcctttgggagagccaggaggagtcccaggagctggagctg
acggtgccctggcaggagatcttggggcacccccccgcacttggtaccacccaggaagag
tggctggtgtggctccgcttccacaagaagaagtggcagctgcaggccaggcagcgcctt
gcgcgcaggaagaggcagcgcctcgagggcactcagagcgcaccgagggccggggcactc
cgcgaggggcctgccacggggctggggagcttcctgcggagggctgcccgcagcatcctg
gacctcccgtggcagatagtgcagatcagtgagaccagccagcctggccttttcaggctg
tgggctgtcattggcagtgacctgtactgcatcaggctgagcatcccacgcgtgttctac
gtgaaccagcgggtggcaaaagcagaggaggggccctcatatcgcaaggtgaaccgcgtg
ctccctcgcgccaatgtggtccacaatctctatgagtactcggtgcccgaggacatgtac
caggagcacatcaacgaaatcaacacagagctgtcagcgccggacatcgagggcgtctac
gagactcaggtgccgctgctgttccgggcccttgtgcagctcggctgtgtatgtgtggtc
aacaagcagcttgtgaggcacctctctggctgggaagcagaaacctttgccctcgagcac
ttggagatgcgttctctggcccagttcagctacctggaaccagggagcatccgccacctc
tacctgtatcaccacgctcagggccacaaggcactcttcggggttttcatccccacacag
cgcagggcatctgtgtttgtgctggacaaggtgcgcagcaaccagatgccgagcctcagt
gccgtgtactcctcggagcacagcctcctgctggagcaggtgggccctgagttcctgcct
cctcccaagcacacctttgaggttcgagcagagaccgacttgaagaccatctgcagagcc
atccagcgcctcctgctcgcctacaaggaggagcgccgtgggcccaccctggttgctgtg
cagtccagctgggagctgaggagactggcaggcgaggtccctgtgctggaggagttccca
ctggtgccagtgcgggtggccgataaggtcagttacgcagtcctggactggcagcgccat
ggggcgcggcacatgatccgacactaccttcacctggacacctgcctctcccaggctttc
gaaatgagcaggtattttcacattcccgttgggaaccttccagaggacatctctaccttt
ggttccgacctcttctttgcccgccacctccagcgccacagccacctcctctggctctct
cccacatcccggcccgacctgggtggcaaggaggccgacgacagccgcctggtcatggag
cttgaagaccatgccacagtggagatcaacagctcaggctgctactccacagtgtgcgtg
gagctggacgtccagaaccttgctgtcaacaccatccttcagtcacaccgcatcaacgac
atggagggggccgccagtgcaggcatcagcttcgacgcgatcccgcaggcctccctggag
gacatgatcaccggcaaccaggctgcctccatgccagccagctatgacgagacggccctc
tgctccagcaccttcaggatcctgaagagcatggtggtgggctgggtgaaggagatcacg
cagtaccacaacgtttatgccgacaaccaggtgatgcacttctaccggtggctgcggtcc
ccgtcctccctgctccatgaccccgccttgcaccgcacactgcacagcatgatgaagaag
ctcttcctgcagctcattgctgagttcaagcgcctcgggtcatcagtcatttacgccaac
ttcaaccgcatcatcctctgcacgaggaagcgccgcattgaggacgcccttgcctacgtg
gattacatcaccaacagcatccactctaaagagatcttccattccttgacaatctctttc
tctcgatgctgggaatttcttctctggatggatccatctaactatgggggaatcaaagga
aaggtctcacctagtattcactgtggacagcaagagtccccggaaggggaggaagcagag
agagagcaggaggaggaggaggaggaggaggaggaggaagaagaaagcttggaggaagcc
agagtggaggatttactggaaaacaactggaacattttgcagtttttgccacaggcggcc
tcctgtcaaagctactttctcatgatcgtctcagcgtacattgtggctgtgtaccacagc
atgaaggaggagctgaggcgcagcgccccagggagcacccccgtgaagaggagaggggcc
agccagttctcccaggaggcagagggtgcagctggggccctacccggaatgatcactttt
tctcaggactacgtggcaaatgagctcacccagaacttcttcaccatcacacagaagatt
caaaagaaagtcacaggctctcggaactctacggagccctcagagatgttccctcagctc
ccgggttctcacctgctgctcaacaaccctgctctggagttcatcaagtacgtgtgcaag
gtcctgtccctggacacgaacatcacgaaccaggtgaacaagctgcgccgggacctgctg
cgcctggtaggcgtcggcgagttctcacaggaggcacagttccgagacccctgccgctcc
catgtgctctcagaggtcatctgccacagctgcaatttctgccgggacctggacctgtgc
aaagactccaccttctcccaggatggggcagtcctgcctcagtggctctgttccaactgt
gaggtgccctatgaccccaccgtcattgaggcggccctggtggatgcgctgcagaagaag
ctgatggccttcacgctgcaggacctggtctgcctgaagtgcagtggtgtgaaggagacc
cacatgcccatccactgcagctgtgcaggcgactttgccctcaccatgcacaccaaggtc
ttcatggagcaggttggaatcttccggaacattgcctggcactacggcatgtcttacctc
ctggagactctggagtggctgctgcagaagactcctccaccaagccgctag

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