Trichechus manatus latirostris (Florida manatee): 101346662
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Entry
101346662 CDS
T05135
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmu03009
]
101346662
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101346662
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
Pre-60S particles
Helicases
101346662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
101346662
NCBI-ProteinID:
XP_023589549
UniProt:
A0A2Y9RC90
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MAAGTRPAAGSRSRAAMAQWRKKKGLRKRRGAASQARGSDSEDGEFEIQAEDDARARKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPMILDGKDVVAMARTGSGKTACFLIPVFERLKAHSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPSLIR
LDVDAKLNEQLKTAFFHVREDAKPAVLLHLLRAVVRPQDQTVVFVATKHHAEYLTELLTT
QRVTCAHIYSALDQTARKINLAKFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLAHPHEEPSADAAGVDGV
LGRVPQSVVDDEDCGLQSTLAASLELRGLGRVADNAQQQYVRSRPAPSPESIKRAKALDL
TGLGLHPLFSSSFEEQELQRLRLVDSIKKYRSRATIFEINASSRDVSSQVMRAKRQKDHK
AIASFQQGRQERQEGPASTAPSTQAPSVPAMSDPALVKNKPSGEEEEARESVEDVFTEIV
GQKRRRLGPDRGVKRQRAEARQQERDFYVPYRPKDFDSERGLSVGDSGAFEQQVAGAVLD
LMGDEAQNLTRGQQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKQDLYQKWKQK
QKIDDRDSEEEGPSERRGPERRGGKWGRGRGASQPCTPGPAAGRVHSELKTKQQILKQRR
RAQKMRFLQRGGLKRLSARNRHRVQVLQQGAFGRGTHSKKGKMRKRM
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcacgcgccccgcggccggatcccggtcccgagcggccatggcccagtgg
aggaagaagaaggggctccgcaagcgccgtggcgcggcctcccaggctcgcggcagcgac
tcggaggacggggagtttgagatccaggcggaagatgacgcccgggcccggaagctgggc
cctggcagacccctgcccaccttccccacctcggaatgcacctcggatgtggagccagat
acccgggagatggtgcgagcgcagaacaagaagaagaagaaatcgggaggcttccagtcc
atgggcttgagctacccagtgttcaaaggcatcatgaagaagggctacaaggtgccgacg
cccatccagaggaagaccatcccaatgatcctggatggcaaggacgtggtggccatggcc
cggacaggcagcggcaagacggcctgcttcctcatccccgtgttcgagcgactcaaggcc
cacagtgcccagaccggggcccgcgccctcatcctctcgcccacccgggagctggccctg
cagaccatgaaattcaccaaggagctgggcaagtttacaggcctcaagactgccctgatc
ctgggtggggacaaaatggaagaccagtttgcggccctgcacgaaaatcccgacataatc
attgctacccctgggcggctggtgcacgtggctgtggagatgaacttgaagctgcagagc
gtggagtatgtggtatttgatgaggcagacaggctctttgaaatggggtttgcagagcag
ctgcaggaaatcatcggccgtctccctgggggccaccagacggtgctgttctccgccaca
ctgcccaaactgctggtggagtttgcccgggccggcctcacagagccctcgctcatccgg
ctggatgtggacgccaaactcaacgagcagctcaagaccgccttcttccacgtgcgtgag
gacgccaagcctgctgtgctgctccacctgctgcgcgccgtggtgcggccgcaggaccag
acggtggtgtttgtggccacaaagcaccacgccgagtacctcacagagctgctgacgacc
cagcgggtgacctgtgcccacatctacagcgccctggaccagacagcccgcaagatcaac
ctggccaagttcacgcatggcaagtgttctgccctcatcgtgaccgacctggcagcccgt
ggcctggacatcccactgctggacaacgtcatcaattacagcttccctgccaagggcaag
ctcttcctgcaccgtgtgggtcgtgtggcccgggccggccgaagtggcacagcctactcc
ttggtggccccagatgaggtcccctaccttctggacctgcacctgttcctgggccgtgcc
ctcaccctcgcccacccccatgaggagccctcagcagatgcagctggtgtggacggcgtg
ctgggccgggtgccgcagagtgtggtggacgacgaggactgcggcctgcagagcacgctg
gcagcatcactggagctgcggggcctgggccgcgtggccgacaatgcgcagcagcagtat
gtgcgctcgaggccggcaccctcacccgagtccatcaagagggccaaggcgctggacctc
acggggctgggcctgcatccactcttcagctcgagcttcgaggagcaggagctgcagcgg
ctgcggctggtggacagtatcaagaagtaccgctcacgggcgaccatttttgagatcaac
gcctctagccgggatgtgagcagccaggtgatgcgcgccaagcggcagaaggatcacaag
gccatcgccagcttccagcaggggcggcaggagcggcaggagggtccggccagcactgcc
ccgagcacccaggcccccagtgtcccagccatgagcgacccggccctggtgaagaacaag
cccagtggggaggaagaggaggccagagagagcgtggaggatgtcttcacagagattgtg
ggccagaagcggcggcggcttggccccgacaggggagtcaagaggcagcgggcagaggcc
cggcagcaggaacgggacttctacgtgccctaccggcccaaggacttcgacagcgagcgt
ggcctgagcgttggggacagtggggcctttgagcagcaggtggccggggctgtcctggac
ctgatgggggatgaagcccagaacctgacccgcggccagcagcagctcaaatgggaccgg
aagaagaagaggttcgtggggcagtctggacaggaggacaagaaaaagatcaagaccgag
agtgggcgctacattagcagttcctacaagcaggacctctaccagaagtggaagcagaaa
cagaagattgatgatcgggactcggaggaggaggggccatctgagcggcgaggccctgag
cgaagaggtgggaagtggggccgtggccgaggtgcgtcccagccctgcaccccgggcccc
gccgcaggccgtgtgcactctgagctcaagaccaagcagcagatcctgaagcagcggcgc
cgggcccagaagatgcgcttcctgcagcgtgggggcctcaagcggctctcggcccgcaac
cgccaccgggtccaggtgctgcagcagggtgcctttggccggggcacccactccaagaag
ggcaagatgaggaagaggatgtaa
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